RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 BAZ2BQ9UIF8 2168 aaKnown RBP20.62■□□□□ 0.89
NPAS3-202ENST00000356141 BAZ2AQ9UIF9 1905 aaKnown RBP20.62■□□□□ 0.89
NPAS3-202ENST00000356141 UBE2HP62256 183 aa20.62■□□□□ 0.89
NPAS3-202ENST00000356141 DOK7Q18PE1 504 aa20.62■□□□□ 0.89
NPAS3-202ENST00000356141 ZNF622Q969S3 477 aaKnown RBP eCLIP20.62■□□□□ 0.89
NPAS3-202ENST00000356141 C8orf76Q96K31 380 aa20.62■□□□□ 0.89
NPAS3-202ENST00000356141 SLC26A6Q9BXS9 759 aa20.62■□□□□ 0.89
NPAS3-202ENST00000356141 LEO1Q8WVC0 666 aaPredicted RBP20.61■□□□□ 0.89
NPAS3-202ENST00000356141 DYNLL2Q96FJ2 89 aa20.61■□□□□ 0.89
NPAS3-202ENST00000356141 USP28Q96RU2 1077 aa20.61■□□□□ 0.89
NPAS3-202ENST00000356141 SLC12A7Q9Y666 1083 aa20.61■□□□□ 0.89
NPAS3-202ENST00000356141 MYH13Q9UKX3 1938 aa20.61■□□□□ 0.89
NPAS3-202ENST00000356141 ZBTB43O43298 467 aa20.61■□□□□ 0.89
NPAS3-202ENST00000356141 GUCY1A2P33402 732 aa20.61■□□□□ 0.89
NPAS3-202ENST00000356141 EN1Q05925 392 aaPredicted RBP20.61■□□□□ 0.89
NPAS3-202ENST00000356141 LY75O60449 1722 aa20.6■□□□□ 0.89
NPAS3-202ENST00000356141 KIF28PB7ZC32 967 aa20.6■□□□□ 0.89
NPAS3-202ENST00000356141 HSP90AA2PQ14568 343 aaPredicted RBP20.6■□□□□ 0.89
NPAS3-202ENST00000356141 SLC27A3Q5K4L6 730 aa20.6■□□□□ 0.89
NPAS3-202ENST00000356141 MCM9Q9NXL9 1143 aa20.6■□□□□ 0.89
NPAS3-202ENST00000356141 ATP2B1P20020 1258 aa20.59■□□□□ 0.89
NPAS3-202ENST00000356141 RXRBP28702 533 aa20.59■□□□□ 0.89
NPAS3-202ENST00000356141 SH3RF3Q8TEJ3 882 aaPredicted RBP20.59■□□□□ 0.89
NPAS3-202ENST00000356141 PGBD1Q96JS3 809 aa20.59■□□□□ 0.89
NPAS3-202ENST00000356141 CTR9Q6PD62 1173 aa20.59■□□□□ 0.89
NPAS3-202ENST00000356141 LRSAM1Q6UWE0 723 aa20.59■□□□□ 0.89
NPAS3-202ENST00000356141 MAPKAPK5Q8IW41 473 aa20.59■□□□□ 0.89
NPAS3-202ENST00000356141 FAM43AQ8N2R8 423 aa20.59■□□□□ 0.89
NPAS3-202ENST00000356141 SLC44A5Q8NCS7 719 aa20.59■□□□□ 0.89
NPAS3-202ENST00000356141 UBAC1Q9BSL1 405 aa20.59■□□□□ 0.89
NPAS3-202ENST00000356141 XDHP47989 1333 aa20.59■□□□□ 0.89
NPAS3-202ENST00000356141 LDHBP07195 334 aaKnown RBP20.59■□□□□ 0.89
NPAS3-202ENST00000356141 WTAPQ15007 396 aa20.59■□□□□ 0.89
NPAS3-202ENST00000356141 DACT1Q9NYF0 836 aa20.59■□□□□ 0.89
NPAS3-202ENST00000356141 ZNF445P59923 1031 aa20.58■□□□□ 0.89
NPAS3-202ENST00000356141 TGFBRAP1Q8WUH2 860 aa20.58■□□□□ 0.89
NPAS3-202ENST00000356141 GGA1Q9UJY5 639 aa20.58■□□□□ 0.89
NPAS3-202ENST00000356141 USP5P45974 858 aa20.58■□□□□ 0.88
NPAS3-202ENST00000356141 RBM17Q96I25 401 aaKnown RBP20.58■□□□□ 0.88
NPAS3-202ENST00000356141 ALG1Q9BT22 464 aa20.58■□□□□ 0.88
NPAS3-202ENST00000356141 KCNJ14Q9UNX9 436 aa20.58■□□□□ 0.88
NPAS3-202ENST00000356141 NR1I2O75469 434 aa20.57■□□□□ 0.88
NPAS3-202ENST00000356141 SLURP2P0DP57 97 aa20.57■□□□□ 0.88
NPAS3-202ENST00000356141 HMGN5P82970 282 aaKnown RBP20.57■□□□□ 0.88
NPAS3-202ENST00000356141 EZH2Q15910 746 aaKnown RBP20.57■□□□□ 0.88
NPAS3-202ENST00000356141 TNKSO95271 1327 aa20.57■□□□□ 0.88
NPAS3-202ENST00000356141 ADRA2BP18089 450 aa20.57■□□□□ 0.88
NPAS3-202ENST00000356141 GTF2IP78347 998 aa20.57■□□□□ 0.88
NPAS3-202ENST00000356141 ARAP2Q8WZ64 1704 aa20.57■□□□□ 0.88
NPAS3-202ENST00000356141 PNPLA7Q6ZV29 1317 aa20.56■□□□□ 0.88
NPAS3-202ENST00000356141 SALL1Q9NSC2 1324 aa20.56■□□□□ 0.88
NPAS3-202ENST00000356141 ERICH2A1L162 156 aa20.56■□□□□ 0.88
NPAS3-202ENST00000356141 GNL2Q13823 731 aaKnown RBP20.56■□□□□ 0.88
NPAS3-202ENST00000356141 DCP1AQ9NPI6 582 aaPredicted RBP20.56■□□□□ 0.88
NPAS3-202ENST00000356141 KCNQ5Q9NR82 932 aa20.56■□□□□ 0.88
NPAS3-202ENST00000356141 CLIC4Q9Y696 253 aa20.56■□□□□ 0.88
NPAS3-202ENST00000356141 LLPHQ9BRT6 129 aaKnown RBP20.56■□□□□ 0.88
NPAS3-202ENST00000356141 CD209Q9NNX6 404 aa20.56■□□□□ 0.88
NPAS3-202ENST00000356141 FAM217BQ9NTX9 383 aaPredicted RBP20.56■□□□□ 0.88
NPAS3-202ENST00000356141 GNAT2P19087 354 aa20.55■□□□□ 0.88
NPAS3-202ENST00000356141 CHRNA5P30532 468 aa20.55■□□□□ 0.88
NPAS3-202ENST00000356141 ME1P48163 572 aa20.55■□□□□ 0.88
NPAS3-202ENST00000356141 ZNF772Q68DY9 489 aaPredicted RBP20.55■□□□□ 0.88
NPAS3-202ENST00000356141 RASGRP2Q7LDG7 609 aa20.55■□□□□ 0.88
NPAS3-202ENST00000356141 ZNF804AQ7Z570 1209 aa20.55■□□□□ 0.88
NPAS3-202ENST00000356141 TBC1D16Q8TBP0 767 aa20.55■□□□□ 0.88
NPAS3-202ENST00000356141 TSPY26PQ9H489 355 aa20.55■□□□□ 0.88
NPAS3-202ENST00000356141 MARCKSP29966 332 aaPredicted RBP20.54■□□□□ 0.88
NPAS3-202ENST00000356141 SCNN1DP51172 638 aa20.54■□□□□ 0.88
NPAS3-202ENST00000356141 ALX1Q15699 326 aa20.54■□□□□ 0.88
NPAS3-202ENST00000356141 MFSD14BQ5SR56 506 aa20.54■□□□□ 0.88
NPAS3-202ENST00000356141 CCDC183Q5T5S1 534 aa20.54■□□□□ 0.88
NPAS3-202ENST00000356141 STAG1Q8WVM7 1258 aa20.54■□□□□ 0.88
NPAS3-202ENST00000356141 UBR3Q6ZT12 1888 aa20.54■□□□□ 0.88
NPAS3-202ENST00000356141 PPEF1O14829 653 aaPredicted RBP20.54■□□□□ 0.88
NPAS3-202ENST00000356141 IARSP41252 1262 aaKnown RBP20.54■□□□□ 0.88
NPAS3-202ENST00000356141 PICALMQ13492 652 aa20.54■□□□□ 0.88
NPAS3-202ENST00000356141 SYNE3Q6ZMZ3 975 aa20.54■□□□□ 0.88
NPAS3-202ENST00000356141 SYAP1Q96A49 352 aaPredicted RBP20.54■□□□□ 0.88
NPAS3-202ENST00000356141 KRT23Q9C075 422 aa20.54■□□□□ 0.88
NPAS3-202ENST00000356141 ZMYM6O95789 1325 aa20.54■□□□□ 0.88
NPAS3-202ENST00000356141 TMEM87AQ8NBN3 555 aa20.54■□□□□ 0.88
NPAS3-202ENST00000356141 CRNKL1Q9BZJ0 848 aaKnown RBP20.54■□□□□ 0.88
NPAS3-202ENST00000356141 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.53■□□□□ 0.88
NPAS3-202ENST00000356141 DEFB132Q7Z7B7 95 aa20.53■□□□□ 0.88
NPAS3-202ENST00000356141 DHX16O60231 1041 aaKnown RBP20.53■□□□□ 0.88
NPAS3-202ENST00000356141 ENAHQ8N8S7 591 aaPredicted RBP20.53■□□□□ 0.88
NPAS3-202ENST00000356141 DBNDD1Q9H9R9 158 aa20.53■□□□□ 0.88
NPAS3-202ENST00000356141 CACNA1SQ13698 1873 aa20.53■□□□□ 0.88
NPAS3-202ENST00000356141 CRY2Q49AN0 593 aa20.52■□□□□ 0.88
NPAS3-202ENST00000356141 TMEM87BQ96K49 555 aa20.52■□□□□ 0.88
NPAS3-202ENST00000356141 MYH2Q9UKX2 1941 aa20.52■□□□□ 0.88
NPAS3-202ENST00000356141 SART3Q15020 963 aaKnown RBP20.52■□□□□ 0.88
NPAS3-202ENST00000356141 RTN1Q16799 776 aa20.52■□□□□ 0.88
NPAS3-202ENST00000356141 ZNF654Q8IZM8 581 aa20.52■□□□□ 0.88
NPAS3-202ENST00000356141 CNNM2Q9H8M5 875 aa20.52■□□□□ 0.88
NPAS3-202ENST00000356141 LEMD3Q9Y2U8 911 aa20.52■□□□□ 0.88
NPAS3-202ENST00000356141 IRS2Q9Y4H2 1338 aa20.52■□□□□ 0.87
NPAS3-202ENST00000356141 DOCK2Q92608 1830 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 G3V3G9 751 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms