RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 MB21D2Q8IYB1 491 aaPredicted RBP18.46■□□□□ 0.55
CTSA-202ENST00000354880 ZDHHC15Q96MV8 337 aa18.46■□□□□ 0.55
CTSA-202ENST00000354880 RNF41Q9H4P4 317 aaPredicted RBP18.46■□□□□ 0.55
CTSA-202ENST00000354880 CNNM2Q9H8M5 875 aa18.46■□□□□ 0.55
CTSA-202ENST00000354880 ADAMTSL1Q8N6G6 1762 aa18.46■□□□□ 0.55
CTSA-202ENST00000354880 MCM5P33992 734 aa18.45■□□□□ 0.54
CTSA-202ENST00000354880 CXCL9Q07325 125 aa18.45■□□□□ 0.54
CTSA-202ENST00000354880 TOB2Q14106 344 aaPredicted RBP18.45■□□□□ 0.54
CTSA-202ENST00000354880 APOBEC3HQ6NTF7 200 aaKnown RBP18.45■□□□□ 0.54
CTSA-202ENST00000354880 NEDD4P46934 1319 aa18.45■□□□□ 0.54
CTSA-202ENST00000354880 NAV1Q8NEY1 1877 aa18.45■□□□□ 0.54
CTSA-202ENST00000354880 CYP2D7A0A087X1C5 515 aa18.44■□□□□ 0.54
CTSA-202ENST00000354880 RBM5P52756 815 aaKnown RBP eCLIP18.44■□□□□ 0.541e-13■■■□□ 18.6
CTSA-202ENST00000354880 FGD1P98174 961 aa18.44■□□□□ 0.54
CTSA-202ENST00000354880 MAPKAPK5Q8IW41 473 aa18.44■□□□□ 0.54
CTSA-202ENST00000354880 GMLQ99445 158 aa18.44■□□□□ 0.54
CTSA-202ENST00000354880 LARP6Q9BRS8 491 aaKnown RBP18.44■□□□□ 0.54
CTSA-202ENST00000354880 LRRC2Q9BYS8 371 aa18.44■□□□□ 0.54
CTSA-202ENST00000354880 KRT23Q9C075 422 aa18.44■□□□□ 0.54
CTSA-202ENST00000354880 LAMB1P07942 1786 aa18.44■□□□□ 0.54
CTSA-202ENST00000354880 USP17L8P0C7I0 530 aa18.44■□□□□ 0.54
CTSA-202ENST00000354880 CIAPIN1Q6FI81 312 aa18.44■□□□□ 0.54
CTSA-202ENST00000354880 CHST3Q7LGC8 479 aa18.44■□□□□ 0.54
CTSA-202ENST00000354880 AMOTL1Q8IY63 956 aa18.44■□□□□ 0.54
CTSA-202ENST00000354880 AGBL3Q8NEM8 1001 aa18.44■□□□□ 0.54
CTSA-202ENST00000354880 ZSCAN31Q96LW9 406 aaPredicted RBP18.44■□□□□ 0.54
CTSA-202ENST00000354880 SLKQ9H2G2 1235 aaPredicted RBP18.44■□□□□ 0.54
CTSA-202ENST00000354880 INCENPQ9NQS7 918 aa18.44■□□□□ 0.54
CTSA-202ENST00000354880 USP40Q9NVE5 1235 aa18.44■□□□□ 0.54
CTSA-202ENST00000354880 TACC3Q9Y6A5 838 aa18.44■□□□□ 0.54
CTSA-202ENST00000354880 FOCADQ5VW36 1801 aa18.43■□□□□ 0.54
CTSA-202ENST00000354880 FLT1P17948 1338 aa18.43■□□□□ 0.54
CTSA-202ENST00000354880 WDR19Q8NEZ3 1342 aa18.43■□□□□ 0.54
CTSA-202ENST00000354880 B4E1Z4 1266 aa18.43■□□□□ 0.54
CTSA-202ENST00000354880 PRC1O43663 620 aa18.43■□□□□ 0.54
CTSA-202ENST00000354880 PCP11498 1178 aaKnown RBP18.43■□□□□ 0.54
CTSA-202ENST00000354880 PRELPP51888 382 aa18.43■□□□□ 0.54
CTSA-202ENST00000354880 CDC42EP5Q6NZY7 148 aa18.43■□□□□ 0.54
CTSA-202ENST00000354880 ARHGAP27Q6ZUM4 889 aa18.43■□□□□ 0.54
CTSA-202ENST00000354880 AGXT2Q9BYV1 514 aa18.43■□□□□ 0.54
CTSA-202ENST00000354880 ZBTB12Q9Y330 459 aaPredicted RBP18.43■□□□□ 0.54
CTSA-202ENST00000354880 SMIM22K7EJ46 135 aa18.42■□□□□ 0.54
CTSA-202ENST00000354880 SLC3A2P08195 630 aaKnown RBP18.42■□□□□ 0.54
CTSA-202ENST00000354880 CUL4AQ13619 759 aa18.42■□□□□ 0.54
CTSA-202ENST00000354880 TNIP1Q15025 636 aa18.42■□□□□ 0.54
CTSA-202ENST00000354880 C12orf60Q5U649 245 aa18.42■□□□□ 0.54
CTSA-202ENST00000354880 STK11IPQ8N1F8 1099 aa18.42■□□□□ 0.54
CTSA-202ENST00000354880 FBXL16Q8N461 479 aa18.42■□□□□ 0.54
CTSA-202ENST00000354880 SH2B1Q9NRF2 756 aaPredicted RBP18.42■□□□□ 0.54
CTSA-202ENST00000354880 TOMM22Q9NS69 142 aa18.42■□□□□ 0.54
CTSA-202ENST00000354880 HDAC9Q9UKV0 1011 aa18.42■□□□□ 0.54
CTSA-202ENST00000354880 TPCN1Q9ULQ1 816 aa18.42■□□□□ 0.54
CTSA-202ENST00000354880 CYP2D6P10635 497 aa18.42■□□□□ 0.54
CTSA-202ENST00000354880 ANTXR2P58335 489 aa18.42■□□□□ 0.54
CTSA-202ENST00000354880 OGFOD1Q8N543 542 aa18.42■□□□□ 0.54
CTSA-202ENST00000354880 BRF1Q92994 677 aa18.42■□□□□ 0.54
CTSA-202ENST00000354880 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
CTSA-202ENST00000354880 PCDHAC2Q9Y5I4 1007 aa18.42■□□□□ 0.54
CTSA-202ENST00000354880 ECM29Q5VYK3 1845 aa18.41■□□□□ 0.54
CTSA-202ENST00000354880 KDM4AO75164 1064 aa18.41■□□□□ 0.54
CTSA-202ENST00000354880 WDHD1O75717 1129 aaPredicted RBP18.41■□□□□ 0.54
CTSA-202ENST00000354880 POLR3DP05423 398 aaPredicted RBP18.41■□□□□ 0.54
CTSA-202ENST00000354880 FGRP09769 529 aa18.41■□□□□ 0.54
CTSA-202ENST00000354880 CFAP100Q494V2 611 aa18.41■□□□□ 0.54
CTSA-202ENST00000354880 DDX60LQ5H9U9 1706 aaKnown RBP18.41■□□□□ 0.54
CTSA-202ENST00000354880 RRP12Q5JTH9 1297 aaKnown RBP18.41■□□□□ 0.54
CTSA-202ENST00000354880 CYB5R4Q7L1T6 521 aa18.41■□□□□ 0.54
CTSA-202ENST00000354880 MYH1P12882 1939 aa18.4■□□□□ 0.54
CTSA-202ENST00000354880 FZD9O00144 591 aa18.4■□□□□ 0.54
CTSA-202ENST00000354880 LARGE1O95461 756 aa18.4■□□□□ 0.54
CTSA-202ENST00000354880 EVX2Q03828 476 aa18.4■□□□□ 0.54
CTSA-202ENST00000354880 ME3Q16798 604 aa18.4■□□□□ 0.54
CTSA-202ENST00000354880 SLC4A8Q2Y0W8 1093 aa18.4■□□□□ 0.54
CTSA-202ENST00000354880 NKX2-3Q8TAU0 364 aa18.4■□□□□ 0.54
CTSA-202ENST00000354880 ZSWIM5Q9P217 1185 aa18.4■□□□□ 0.54
CTSA-202ENST00000354880 SAP30BPQ9UHR5 308 aaKnown RBP18.4■□□□□ 0.54
CTSA-202ENST00000354880 EIF6P56537 245 aaKnown RBP18.39■□□□□ 0.54
CTSA-202ENST00000354880 PDE4BQ07343 736 aa18.39■□□□□ 0.54
CTSA-202ENST00000354880 PICALMQ13492 652 aa18.39■□□□□ 0.54
CTSA-202ENST00000354880 ESR2Q92731 530 aa18.39■□□□□ 0.54
CTSA-202ENST00000354880 INTS4Q96HW7 963 aaKnown RBP18.39■□□□□ 0.54
CTSA-202ENST00000354880 DDX4Q9NQI0 724 aaKnown RBP18.39■□□□□ 0.54
CTSA-202ENST00000354880 ROBO3Q96MS0 1386 aa18.39■□□□□ 0.53
CTSA-202ENST00000354880 LMNB1P20700 586 aa18.39■□□□□ 0.53
CTSA-202ENST00000354880 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.39■□□□□ 0.53
CTSA-202ENST00000354880 ORC4O43929 436 aa18.38■□□□□ 0.53
CTSA-202ENST00000354880 RPS12P25398 132 aaKnown RBP18.38■□□□□ 0.53
CTSA-202ENST00000354880 PLCD1P51178 756 aa18.38■□□□□ 0.53
CTSA-202ENST00000354880 TMEM87BQ96K49 555 aa18.38■□□□□ 0.53
CTSA-202ENST00000354880 PRMT6Q96LA8 375 aaPredicted RBP18.38■□□□□ 0.53
CTSA-202ENST00000354880 DICER1Q9UPY3 1922 aaKnown RBP18.38■□□□□ 0.53
CTSA-202ENST00000354880 SPDYE2BA6NHP3 402 aa18.37■□□□□ 0.53
CTSA-202ENST00000354880 PRDM1O75626 825 aa18.37■□□□□ 0.53
CTSA-202ENST00000354880 SPDYE6P0CI01 402 aa18.37■□□□□ 0.53
CTSA-202ENST00000354880 APOBRQ0VD83 1088 aa18.37■□□□□ 0.53
CTSA-202ENST00000354880 NFIAQ12857 509 aa18.37■□□□□ 0.53
CTSA-202ENST00000354880 DLGAP5Q15398 846 aa18.37■□□□□ 0.53
CTSA-202ENST00000354880 IDI2Q9BXS1 227 aa18.37■□□□□ 0.53
CTSA-202ENST00000354880 GPHNQ9NQX3 736 aaPredicted RBP18.37■□□□□ 0.53
CTSA-202ENST00000354880 ANGEL1Q9UNK9 670 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms