RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 SH3GLB2Q9NR46 395 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 CNNM1Q9NRU3 951 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 GNL3LQ9NVN8 582 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 RCOR1Q9UKL0 485 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 IFNAR1P17181 557 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 MCM5P33992 734 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 GSTO1P78417 241 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 ORC2Q13416 577 aaPredicted RBP6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 TMTC2Q8N394 836 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 GPT2Q8TD30 523 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 BRPF3Q9ULD4 1205 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 STX6O43752 255 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 FMNL1O95466 1100 aaPredicted RBP6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 RFC4P35249 363 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 NPY5RQ15761 445 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 CTR9Q6PD62 1173 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 NPM2Q86SE8 214 aaKnown RBP6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 NBPF5PQ86XG9 351 aaPredicted RBP6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 PPP1R9BQ96SB3 815 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 SSC5DA1L4H1 1573 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 FRAT2O75474 233 aaPredicted RBP6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 MBD3O95983 291 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 ALDH1B1P30837 517 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 BCAMP50895 628 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 MCCD1P59942 119 aaPredicted RBP6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 PKP1Q13835 747 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 C12orf60Q5U649 245 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 LCORLQ8N3X6 602 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 POLLQ9UGP5 575 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 MYH7BA7E2Y1 1941 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 A0A1W2PQ27 194 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 A0A1W2PQ64 194 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 A0A1W2PQD8 194 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 SLC26A4O43511 780 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 HIBADHP31937 336 aaKnown RBP6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 MECOMQ03112 1051 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 CCDC129Q6ZRS4 1044 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 POLR3EQ9NVU0 708 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 ANGEL1Q9UNK9 670 aaKnown RBP6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 TRPM7Q96QT4 1865 aa6.34□□□□□ -1.39
PRPF4B-201ENST00000337659 A0A0G2JLW4 131 aa6.34□□□□□ -1.4
PRPF4B-201ENST00000337659 KLRK1P26718 216 aa6.34□□□□□ -1.4
PRPF4B-201ENST00000337659 RCSD1Q6JBY9 416 aa6.34□□□□□ -1.4
PRPF4B-201ENST00000337659 ZDHHC15Q96MV8 337 aa6.34□□□□□ -1.4
PRPF4B-201ENST00000337659 MPHOSPH8Q99549 860 aa6.34□□□□□ -1.4
PRPF4B-201ENST00000337659 RNF41Q9H4P4 317 aaPredicted RBP6.34□□□□□ -1.4
PRPF4B-201ENST00000337659 RTEL1Q9NZ71 1219 aa6.34□□□□□ -1.4
PRPF4B-201ENST00000337659 PPEF1O14829 653 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 SLC9C2Q5TAH2 1124 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 PI16Q6UXB8 463 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 Q6ZUG5 572 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 ZNF804AQ7Z570 1209 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 ENGASEQ8NFI3 743 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 SHISA4Q96DD7 197 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 CD209Q9NNX6 404 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 DCP1AQ9NPI6 582 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 HPSEQ9Y251 543 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 ARID2Q68CP9 1835 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 CAVIN4Q5BKX8 364 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 APOA5Q6Q788 366 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 BRAPQ7Z569 592 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 DGKHQ86XP1 1220 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 DNAJC5GQ8N7S2 189 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 MKL1Q969V6 931 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 hCG_1984214I3L0E3 225 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 PLA2G6O60733 806 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 CHRM1P11229 460 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 PPARAQ07869 468 aa6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 PAXIP1Q6ZW49 1069 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 ZNF713Q8N859 430 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 FHDC1Q9C0D6 1143 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-201ENST00000337659 TBC1D12O60347 775 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 TGFB2P61812 414 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 TROAPQ12815 778 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 GSE1Q14687 1217 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 TATDN1Q6P1N9 297 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 TXNRD3Q86VQ6 643 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 BPIFA3Q9BQP9 254 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 RNF26Q9BY78 433 aaPredicted RBP6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 GINM1Q9NU53 330 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 PPP6R2O75170 966 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 LETM1O95202 739 aaPredicted RBP6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 YEATS4O95619 227 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 CALM1P0DP23 149 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 CALM2P0DP24 149 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 CALM3P0DP25 149 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 HSPA6P17066 643 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 GJB2P29033 226 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 UBE2HP62256 183 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 FSTL1Q12841 308 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 HS1BP3Q53T59 392 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 ZNF579Q8NAF0 562 aaKnown RBP6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 RBM28Q9NW13 759 aaKnown RBP6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 SERPINA10Q9UK55 444 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 ATP6V1DQ9Y5K8 247 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 ESYT2A0FGR8 921 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 PRPF3O43395 683 aaKnown RBP6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 RANBP6O60518 1105 aaKnown RBP6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 HOXA7P31268 230 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms