RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 SCHIP1Q9P0W5 487 aaPredicted RBP18.25■□□□□ 0.51
PTCH1-201ENST00000331920 TRIM75PA6NK02 468 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 U2AF2P26368 475 aaKnown RBP eCLIP18.25■□□□□ 0.51
PTCH1-201ENST00000331920 SMTNP53814 917 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 ANKRD20A3Q5VUR7 823 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 ACSBG1Q96GR2 724 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 MYO1AQ9UBC5 1043 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 KLHL7Q8IXQ5 586 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 SSH1Q8WYL5 1049 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 SETDB2Q96T68 719 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 NSD3Q9BZ95 1437 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 EXOC5O00471 708 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 TRAF1Q13077 416 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 PARD3BQ8TEW8 1205 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 VPS16Q9H269 839 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 ZBTB41Q5SVQ8 909 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 CNGA4Q8IV77 575 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 MMEL1Q495T6 779 aa18.24■□□□□ 0.51
PTCH1-201ENST00000331920 MIGA1Q8NAN2 632 aa18.24■□□□□ 0.51
PTCH1-201ENST00000331920 SAP30BPQ9UHR5 308 aaKnown RBP18.24■□□□□ 0.51
PTCH1-201ENST00000331920 FNBP4Q8N3X1 1017 aaPredicted RBP18.24■□□□□ 0.51
PTCH1-201ENST00000331920 TTC30BQ8N4P2 665 aa18.24■□□□□ 0.51
PTCH1-201ENST00000331920 SLC12A1Q13621 1099 aa18.24■□□□□ 0.51
PTCH1-201ENST00000331920 PDCD2Q16342 344 aaPredicted RBP18.24■□□□□ 0.51
PTCH1-201ENST00000331920 DENND2CQ68D51 928 aa18.24■□□□□ 0.51
PTCH1-201ENST00000331920 VPS37BQ9H9H4 285 aa18.24■□□□□ 0.51
PTCH1-201ENST00000331920 SMARCA2P51531 1590 aa18.24■□□□□ 0.51
PTCH1-201ENST00000331920 AKR1B15C9JRZ8 316 aaPredicted RBP18.24■□□□□ 0.51
PTCH1-201ENST00000331920 RPL13P26373 211 aaKnown RBP18.24■□□□□ 0.51
PTCH1-201ENST00000331920 GCKP35557 465 aa18.24■□□□□ 0.51
PTCH1-201ENST00000331920 KCNH5Q8NCM2 988 aa18.24■□□□□ 0.51
PTCH1-201ENST00000331920 RNF8O76064 485 aa18.24■□□□□ 0.51
PTCH1-201ENST00000331920 TYRO3Q06418 890 aa18.24■□□□□ 0.51
PTCH1-201ENST00000331920 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.24■□□□□ 0.51
PTCH1-201ENST00000331920 TMTC2Q8N394 836 aa18.24■□□□□ 0.51
PTCH1-201ENST00000331920 CARD10Q9BWT7 1032 aa18.24■□□□□ 0.51
PTCH1-201ENST00000331920 TBC1D7Q9P0N9 293 aa18.24■□□□□ 0.51
PTCH1-201ENST00000331920 ITM2BQ9Y287 266 aa18.24■□□□□ 0.51
PTCH1-201ENST00000331920 CCDC93Q567U6 631 aa18.23■□□□□ 0.51
PTCH1-201ENST00000331920 MAGEB6Q8N7X4 407 aa18.23■□□□□ 0.51
PTCH1-201ENST00000331920 CCDC94Q9BW85 323 aaPredicted RBP18.23■□□□□ 0.51
PTCH1-201ENST00000331920 GJA3Q9Y6H8 435 aa18.23■□□□□ 0.51
PTCH1-201ENST00000331920 SPTLC2O15270 562 aa18.23■□□□□ 0.51
PTCH1-201ENST00000331920 GNAQP50148 359 aa18.23■□□□□ 0.51
PTCH1-201ENST00000331920 MCM9Q9NXL9 1143 aa18.23■□□□□ 0.51
PTCH1-201ENST00000331920 ACRBPQ8NEB7 543 aa18.23■□□□□ 0.51
PTCH1-201ENST00000331920 KRT12Q99456 494 aa18.23■□□□□ 0.51
PTCH1-201ENST00000331920 MED10Q9BTT4 135 aa18.23■□□□□ 0.51
PTCH1-201ENST00000331920 CTAGE3PQ8IX95 158 aa18.23■□□□□ 0.51
PTCH1-201ENST00000331920 IFT20Q8IY31 132 aa18.23■□□□□ 0.51
PTCH1-201ENST00000331920 LGSNQ5TDP6 509 aa18.23■□□□□ 0.51
PTCH1-201ENST00000331920 CCDC105Q8IYK2 499 aa18.23■□□□□ 0.51
PTCH1-201ENST00000331920 TMX3Q96JJ7 454 aa18.23■□□□□ 0.51
PTCH1-201ENST00000331920 PFDN1O60925 122 aa18.22■□□□□ 0.51
PTCH1-201ENST00000331920 CAPN12Q6ZSI9 719 aa18.22■□□□□ 0.51
PTCH1-201ENST00000331920 GPCPD1Q9NPB8 672 aa18.22■□□□□ 0.51
PTCH1-201ENST00000331920 MYOM3Q5VTT5 1437 aa18.22■□□□□ 0.51
PTCH1-201ENST00000331920 ZBBXA8MT70 800 aa18.22■□□□□ 0.51
PTCH1-201ENST00000331920 MYCLP12524 364 aaPredicted RBP18.22■□□□□ 0.51
PTCH1-201ENST00000331920 SV2BQ7L1I2 683 aa18.22■□□□□ 0.51
PTCH1-201ENST00000331920 ZNF804AQ7Z570 1209 aa18.22■□□□□ 0.51
PTCH1-201ENST00000331920 LETM2Q2VYF4 491 aa18.22■□□□□ 0.51
PTCH1-201ENST00000331920 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
PTCH1-201ENST00000331920 GOLGA6BA6NDN3 693 aa18.22■□□□□ 0.51
PTCH1-201ENST00000331920 C20orf194Q5TEA3 1177 aa18.22■□□□□ 0.51
PTCH1-201ENST00000331920 RSAD2Q8WXG1 361 aa18.22■□□□□ 0.51
PTCH1-201ENST00000331920 DBF4Q9UBU7 674 aaPredicted RBP18.22■□□□□ 0.51
PTCH1-201ENST00000331920 SMYD2Q9NRG4 433 aa18.21■□□□□ 0.51
PTCH1-201ENST00000331920 POLD1P28340 1107 aa18.21■□□□□ 0.51
PTCH1-201ENST00000331920 ZNF174Q15697 407 aa18.21■□□□□ 0.51
PTCH1-201ENST00000331920 FCHSD1Q86WN1 690 aa18.21■□□□□ 0.51
PTCH1-201ENST00000331920 HDAC11Q96DB2 347 aa18.21■□□□□ 0.51
PTCH1-201ENST00000331920 RAP1GDS1P52306 607 aa18.21■□□□□ 0.51
PTCH1-201ENST00000331920 PRPF6O94906 941 aaKnown RBP18.21■□□□□ 0.51
PTCH1-201ENST00000331920 POTEDQ86YR6 584 aa18.21■□□□□ 0.51
PTCH1-201ENST00000331920 PALM2Q8IXS6 379 aa18.21■□□□□ 0.51
PTCH1-201ENST00000331920 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
PTCH1-201ENST00000331920 ZYXQ15942 572 aaKnown RBP18.21■□□□□ 0.51
PTCH1-201ENST00000331920 ERBINQ96RT1 1412 aa18.21■□□□□ 0.51
PTCH1-201ENST00000331920 CALUO43852 315 aaPredicted RBP18.21■□□□□ 0.5
PTCH1-201ENST00000331920 BRD3Q15059 726 aa18.21■□□□□ 0.5
PTCH1-201ENST00000331920 CALML3P27482 149 aa18.2■□□□□ 0.5
PTCH1-201ENST00000331920 TUBB4BP68371 445 aa18.2■□□□□ 0.5
PTCH1-201ENST00000331920 RAD51AP2Q09MP3 1159 aa18.2■□□□□ 0.5
PTCH1-201ENST00000331920 KRT81Q14533 505 aa18.2■□□□□ 0.5
PTCH1-201ENST00000331920 NUCKS1Q9H1E3 243 aaKnown RBP18.2■□□□□ 0.5
PTCH1-201ENST00000331920 CABS1Q96KC9 395 aa18.2■□□□□ 0.5
PTCH1-201ENST00000331920 TRIM35Q9UPQ4 493 aa18.2■□□□□ 0.5
PTCH1-201ENST00000331920 EIF6P56537 245 aaKnown RBP18.2■□□□□ 0.5
PTCH1-201ENST00000331920 FAM71BQ8TC56 605 aa18.2■□□□□ 0.5
PTCH1-201ENST00000331920 NAPGQ99747 312 aaPredicted RBP18.2■□□□□ 0.5
PTCH1-201ENST00000331920 ABCF3Q9NUQ8 709 aa18.2■□□□□ 0.5
PTCH1-201ENST00000331920 LRGUKQ96M69 825 aa18.2■□□□□ 0.5
PTCH1-201ENST00000331920 SLC9C2Q5TAH2 1124 aa18.2■□□□□ 0.5
PTCH1-201ENST00000331920 UQCRFS1P1P0C7P4 283 aa18.19■□□□□ 0.5
PTCH1-201ENST00000331920 NUDT16Q96DE0 195 aaKnown RBP18.19■□□□□ 0.5
PTCH1-201ENST00000331920 PTPDC1A2A3K4 754 aa18.19■□□□□ 0.5
PTCH1-201ENST00000331920 PLCB1Q9NQ66 1216 aa18.19■□□□□ 0.5
PTCH1-201ENST00000331920 POLA1P09884 1462 aaPredicted RBP18.19■□□□□ 0.5
PTCH1-201ENST00000331920 PDE6AP16499 860 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms