RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 NAV1Q8NEY1 1877 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 LAMB1P07942 1786 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 IQCA1LA6NCM1 817 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 LMOD1P29536 600 aaPredicted RBP11.26□□□□□ -0.61
C11orf54-201ENST00000331239 TNFAIP1Q13829 316 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 DIXDC1Q155Q3 683 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 SPDYE2Q495Y8 402 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 TEX11Q8IYF3 940 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 ZC3H15Q8WU90 426 aaKnown RBP11.26□□□□□ -0.61
C11orf54-201ENST00000331239 NAPBQ9H115 298 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 ARMT1Q9H993 441 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 MYOZ2Q9NPC6 264 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 CNOT7Q9UIV1 285 aaKnown RBP11.26□□□□□ -0.61
C11orf54-201ENST00000331239 PPP2R3BQ9Y5P8 575 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 ZNF541Q9H0D2 1346 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 ATRNL1Q5VV63 1379 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 ROBO3Q96MS0 1386 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 K7ELQ4 463 aaPredicted RBP11.26□□□□□ -0.61
C11orf54-201ENST00000331239 FGAP02671 866 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 FGRP09769 529 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 PTH1RQ03431 593 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 CDC42EP5Q6NZY7 148 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 HOOK2Q96ED9 719 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 IL25Q9H293 177 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 ALDH8A1Q9H2A2 487 aaPredicted RBP11.26□□□□□ -0.61
C11orf54-201ENST00000331239 CNNM2Q9H8M5 875 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 DCP1AQ9NPI6 582 aaPredicted RBP11.26□□□□□ -0.61
C11orf54-201ENST00000331239 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 USP40Q9NVE5 1235 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 JAG2Q9Y219 1238 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 MYH1P12882 1939 aa11.25□□□□□ -0.61
C11orf54-201ENST00000331239 TNNI2P48788 182 aa11.25□□□□□ -0.61
C11orf54-201ENST00000331239 USP50Q70EL3 339 aaPredicted RBP11.25□□□□□ -0.61
C11orf54-201ENST00000331239 TTC6Q86TZ1 520 aa11.25□□□□□ -0.61
C11orf54-201ENST00000331239 MIGA1Q8NAN2 632 aa11.25□□□□□ -0.61
C11orf54-201ENST00000331239 EHD4Q9H223 541 aa11.25□□□□□ -0.61
C11orf54-201ENST00000331239 ADARB2Q9NS39 739 aaKnown RBP11.25□□□□□ -0.61
C11orf54-201ENST00000331239 ZNF213O14771 459 aa11.25□□□□□ -0.61
C11orf54-201ENST00000331239 FOXP2O15409 715 aa11.25□□□□□ -0.61
C11orf54-201ENST00000331239 TRAK2O60296 914 aa11.25□□□□□ -0.61
C11orf54-201ENST00000331239 CD2BP2O95400 341 aaKnown RBP11.25□□□□□ -0.61
C11orf54-201ENST00000331239 HSP90AA1P07900 732 aaKnown RBP11.25□□□□□ -0.61
C11orf54-201ENST00000331239 USP5P45974 858 aa11.25□□□□□ -0.61
C11orf54-201ENST00000331239 RABEP1Q15276 862 aa11.25□□□□□ -0.61
C11orf54-201ENST00000331239 CREB3L3Q68CJ9 461 aa11.25□□□□□ -0.61
C11orf54-201ENST00000331239 FBXL16Q8N461 479 aa11.25□□□□□ -0.61
C11orf54-201ENST00000331239 SLC27A2O14975 620 aa11.24□□□□□ -0.61
C11orf54-201ENST00000331239 DYNLL1P63167 89 aaKnown RBP11.24□□□□□ -0.61
C11orf54-201ENST00000331239 CCDC129Q6ZRS4 1044 aa11.24□□□□□ -0.61
C11orf54-201ENST00000331239 METTL16Q86W50 562 aaKnown RBP11.24□□□□□ -0.61
C11orf54-201ENST00000331239 MICALL2Q8IY33 904 aa11.24□□□□□ -0.61
C11orf54-201ENST00000331239 SH3RF3Q8TEJ3 882 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-201ENST00000331239 MXD3Q9BW11 206 aa11.24□□□□□ -0.61
C11orf54-201ENST00000331239 WDHD1O75717 1129 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-201ENST00000331239 APPP05067 770 aa11.24□□□□□ -0.61
C11orf54-201ENST00000331239 TDO2P48775 406 aa11.24□□□□□ -0.61
C11orf54-201ENST00000331239 SCNN1DP51172 638 aa11.24□□□□□ -0.61
C11orf54-201ENST00000331239 CCDC178Q5BJE1 867 aa11.24□□□□□ -0.61
C11orf54-201ENST00000331239 PPP4R3BQ5MIZ7 849 aa11.24□□□□□ -0.61
C11orf54-201ENST00000331239 APOBEC3FQ8IUX4 373 aaKnown RBP11.24□□□□□ -0.61
C11orf54-201ENST00000331239 FOXP4Q8IVH2 680 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-201ENST00000331239 FAM151AQ8WW52 585 aa11.24□□□□□ -0.61
C11orf54-201ENST00000331239 KRT23Q9C075 422 aa11.24□□□□□ -0.61
C11orf54-201ENST00000331239 ZNF70Q9UC06 446 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-201ENST00000331239 SWAP70Q9UH65 585 aa11.24□□□□□ -0.61
C11orf54-201ENST00000331239 PGAP2Q9UHJ9 254 aa11.24□□□□□ -0.61
C11orf54-201ENST00000331239 GJA3Q9Y6H8 435 aa11.24□□□□□ -0.61
C11orf54-201ENST00000331239 F8W031 263 aaPredicted RBP11.23□□□□□ -0.61
C11orf54-201ENST00000331239 ORC4O43929 436 aa11.23□□□□□ -0.61
C11orf54-201ENST00000331239 RBM5P52756 815 aaKnown RBP eCLIP11.23□□□□□ -0.61
C11orf54-201ENST00000331239 RAB3GAP1Q15042 981 aa11.23□□□□□ -0.61
C11orf54-201ENST00000331239 C12orf60Q5U649 245 aa11.23□□□□□ -0.61
C11orf54-201ENST00000331239 PNMA8AQ86V59 439 aaPredicted RBP11.23□□□□□ -0.61
C11orf54-201ENST00000331239 STAG1Q8WVM7 1258 aa11.23□□□□□ -0.61
C11orf54-201ENST00000331239 GBP4Q96PP9 640 aa11.23□□□□□ -0.61
C11orf54-201ENST00000331239 GINM1Q9NU53 330 aa11.23□□□□□ -0.61
C11orf54-201ENST00000331239 HACL1Q9UJ83 578 aa11.23□□□□□ -0.61
C11orf54-201ENST00000331239 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
C11orf54-201ENST00000331239 GOLGA6L3A6NEY3 463 aa11.23□□□□□ -0.61
C11orf54-201ENST00000331239 TBC1D12O60347 775 aa11.23□□□□□ -0.61
C11orf54-201ENST00000331239 MCM2P49736 904 aa11.23□□□□□ -0.61
C11orf54-201ENST00000331239 VPS53Q5VIR6 699 aa11.23□□□□□ -0.61
C11orf54-201ENST00000331239 TNPO1Q92973 898 aaKnown RBP11.23□□□□□ -0.61
C11orf54-201ENST00000331239 PRMT6Q96LA8 375 aaPredicted RBP11.23□□□□□ -0.61
C11orf54-201ENST00000331239 OSBPL5Q9H0X9 879 aaPredicted RBP11.23□□□□□ -0.61
C11orf54-201ENST00000331239 EPB41L4AQ9HCS5 686 aaPredicted RBP11.23□□□□□ -0.61
C11orf54-201ENST00000331239 FLT1P17948 1338 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 FSD2A1L4K1 749 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 WNT10BO00744 389 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 CHGBP05060 677 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 HLA-DOAP06340 250 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 PDE4BQ07343 736 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 KIF4BQ2VIQ3 1234 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 CTR9Q6PD62 1173 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 GZF1Q9H116 711 aaPredicted RBP11.22□□□□□ -0.61
C11orf54-201ENST00000331239 SNX14Q9Y5W7 946 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 CYP21A2P08686 494 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 MAP3K10Q02779 954 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 PPARAQ07869 468 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 TRDNQ13061 729 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms