RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 DDX11L8A8MPP1 907 aa15.08■□□□□ 0
DDX39A-202ENST00000324340 PSMD14O00487 310 aa15.08■□□□□ 0
DDX39A-202ENST00000324340 CPA1P15085 419 aa15.08■□□□□ 0
DDX39A-202ENST00000324340 CRKP46108 304 aa15.08■□□□□ 0
DDX39A-202ENST00000324340 PRELPP51888 382 aa15.08■□□□□ 0
DDX39A-202ENST00000324340 EXOSC10Q01780 885 aaKnown RBP15.08■□□□□ 0
DDX39A-202ENST00000324340 PPARAQ07869 468 aa15.08■□□□□ 0
DDX39A-202ENST00000324340 CTR9Q6PD62 1173 aa15.08■□□□□ 0
DDX39A-202ENST00000324340 DHX32Q7L7V1 743 aaKnown RBP15.08■□□□□ 0
DDX39A-202ENST00000324340 TBC1D10CQ8IV04 446 aa15.08■□□□□ 0
DDX39A-202ENST00000324340 KIAA0825Q8IV33 1275 aa15.08■□□□□ 0
DDX39A-202ENST00000324340 JDP2Q8WYK2 163 aa15.08■□□□□ 0
DDX39A-202ENST00000324340 PDRG1Q9NUG6 133 aa15.08■□□□□ 0
DDX39A-202ENST00000324340 ARPP21Q9UBL0 812 aaPredicted RBP15.08■□□□□ 0
DDX39A-202ENST00000324340 DICER1Q9UPY3 1922 aaKnown RBP15.07■□□□□ 0
DDX39A-202ENST00000324340 WDR19Q8NEZ3 1342 aa15.07■□□□□ 0
DDX39A-202ENST00000324340 ESPNB1AK53 854 aa15.07■□□□□ 0
DDX39A-202ENST00000324340 RAD17O75943 681 aa15.07■□□□□ 0
DDX39A-202ENST00000324340 MCM4P33991 863 aa15.07■□□□□ 0
DDX39A-202ENST00000324340 SCNN1DP51172 638 aa15.07■□□□□ 0
DDX39A-202ENST00000324340 AK2P54819 239 aa15.07■□□□□ 0
DDX39A-202ENST00000324340 RASSF7Q02833 373 aa15.07■□□□□ 0
DDX39A-202ENST00000324340 CXCL9Q07325 125 aa15.07■□□□□ 0
DDX39A-202ENST00000324340 AKNAD1Q5T1N1 836 aa15.07■□□□□ 0
DDX39A-202ENST00000324340 APOBEC3HQ6NTF7 200 aaKnown RBP15.07■□□□□ 0
DDX39A-202ENST00000324340 FBXL16Q8N461 479 aa15.07■□□□□ 0
DDX39A-202ENST00000324340 AGBL3Q8NEM8 1001 aa15.07■□□□□ 0
DDX39A-202ENST00000324340 NCOA7Q8NI08 942 aa15.07■□□□□ 0
DDX39A-202ENST00000324340 STAG1Q8WVM7 1258 aa15.07■□□□□ 0
DDX39A-202ENST00000324340 FZD9O00144 591 aa15.06■□□□□ 0
DDX39A-202ENST00000324340 FGRP09769 529 aa15.06■□□□□ 0
DDX39A-202ENST00000324340 PCP11498 1178 aaKnown RBP15.06■□□□□ 0
DDX39A-202ENST00000324340 USP5P45974 858 aa15.06■□□□□ 0
DDX39A-202ENST00000324340 MB21D2Q8IYB1 491 aaPredicted RBP15.06■□□□□ 0
DDX39A-202ENST00000324340 AGXT2Q9BYV1 514 aa15.06■□□□□ 0
DDX39A-202ENST00000324340 CHMP5Q9NZZ3 219 aa15.06■□□□□ 0
DDX39A-202ENST00000324340 SBF1O95248 1867 aa15.05■□□□□ -0
DDX39A-202ENST00000324340 USP17L12C9JPN9 530 aa15.05■□□□□ -0
DDX39A-202ENST00000324340 USP17L21D6R901 530 aa15.05■□□□□ -0
DDX39A-202ENST00000324340 MMP14P50281 582 aa15.05■□□□□ -0
DDX39A-202ENST00000324340 TNIP1Q15025 636 aa15.05■□□□□ -0
DDX39A-202ENST00000324340 ANKRD1Q15327 319 aa15.05■□□□□ -0
DDX39A-202ENST00000324340 CIAPIN1Q6FI81 312 aa15.05■□□□□ -0
DDX39A-202ENST00000324340 TEX11Q8IYF3 940 aa15.05■□□□□ -0
DDX39A-202ENST00000324340 TGFBRAP1Q8WUH2 860 aa15.05■□□□□ -0
DDX39A-202ENST00000324340 RNF41Q9H4P4 317 aaPredicted RBP15.05■□□□□ -0
DDX39A-202ENST00000324340 CNNM2Q9H8M5 875 aa15.05■□□□□ -0
DDX39A-202ENST00000324340 TACC3Q9Y6A5 838 aa15.05■□□□□ -0
DDX39A-202ENST00000324340 ROBO3Q96MS0 1386 aa15.05■□□□□ -0
DDX39A-202ENST00000324340 FLT1P17948 1338 aa15.04■□□□□ -0
DDX39A-202ENST00000324340 NEDD4P46934 1319 aa15.04■□□□□ -0
DDX39A-202ENST00000324340 WDHD1O75717 1129 aaPredicted RBP15.04■□□□□ -0
DDX39A-202ENST00000324340 CTDSPL2Q05D32 466 aa15.04■□□□□ -0
DDX39A-202ENST00000324340 TRDNQ13061 729 aa15.04■□□□□ -0
DDX39A-202ENST00000324340 TOB2Q14106 344 aaPredicted RBP15.04■□□□□ -0
DDX39A-202ENST00000324340 C12orf60Q5U649 245 aa15.04■□□□□ -0
DDX39A-202ENST00000324340 CDC42EP5Q6NZY7 148 aa15.04■□□□□ -0
DDX39A-202ENST00000324340 MFSD6Q6ZSS7 791 aa15.04■□□□□ -0
DDX39A-202ENST00000324340 MTERF4Q7Z6M4 381 aaKnown RBP15.04■□□□□ -0
DDX39A-202ENST00000324340 RALYLQ86SE5 291 aaKnown RBP15.04■□□□□ -0
DDX39A-202ENST00000324340 TMX3Q96JJ7 454 aa15.04■□□□□ -0
DDX39A-202ENST00000324340 KRT23Q9C075 422 aa15.04■□□□□ -0
DDX39A-202ENST00000324340 LIMCH1Q9UPQ0 1083 aa15.04■□□□□ -0
DDX39A-202ENST00000324340 MINDY4BA8MYZ0 360 aa15.03■□□□□ -0
DDX39A-202ENST00000324340 NPM3O75607 178 aaKnown RBP15.03■□□□□ -0
DDX39A-202ENST00000324340 USP17L8P0C7I0 530 aa15.03■□□□□ -0
DDX39A-202ENST00000324340 RPS12P25398 132 aaKnown RBP15.03■□□□□ -0
DDX39A-202ENST00000324340 MCM5P33992 734 aa15.03■□□□□ -0
DDX39A-202ENST00000324340 NT5C2P49902 561 aa15.03■□□□□ -0
DDX39A-202ENST00000324340 CUL4AQ13619 759 aa15.03■□□□□ -0
DDX39A-202ENST00000324340 MTMR14Q8NCE2 650 aa15.03■□□□□ -0
DDX39A-202ENST00000324340 USP40Q9NVE5 1235 aa15.03■□□□□ -0
DDX39A-202ENST00000324340 MCM9Q9NXL9 1143 aa15.03■□□□□ -0
DDX39A-202ENST00000324340 HDAC9Q9UKV0 1011 aa15.03■□□□□ -0
DDX39A-202ENST00000324340 MYH1P12882 1939 aa15.03■□□□□ -0
DDX39A-202ENST00000324340 CYP2D7A0A087X1C5 515 aa15.02■□□□□ -0
DDX39A-202ENST00000324340 LMNB1P20700 586 aa15.02■□□□□ -0
DDX39A-202ENST00000324340 ANTXR2P58335 489 aa15.02■□□□□ -0
DDX39A-202ENST00000324340 SKOR2Q2VWA4 1001 aaPredicted RBP15.02■□□□□ -0
DDX39A-202ENST00000324340 Q6ZUG5 572 aa15.02■□□□□ -0
DDX39A-202ENST00000324340 ARHGAP27Q6ZUM4 889 aa15.02■□□□□ -0
DDX39A-202ENST00000324340 ZSCAN31Q96LW9 406 aaPredicted RBP15.02■□□□□ -0
DDX39A-202ENST00000324340 TCEANC2Q96MN5 208 aa15.02■□□□□ -0
DDX39A-202ENST00000324340 MTA3Q9BTC8 594 aa15.02■□□□□ -0
DDX39A-202ENST00000324340 IDI2Q9BXS1 227 aa15.02■□□□□ -0
DDX39A-202ENST00000324340 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.02■□□□□ -0
DDX39A-202ENST00000324340 ZBTB12Q9Y330 459 aaPredicted RBP15.02■□□□□ -0
DDX39A-202ENST00000324340 B4E1Z4 1266 aa15.01□□□□□ -0.01
DDX39A-202ENST00000324340 SMIM22K7EJ46 135 aa15.01□□□□□ -0.01
DDX39A-202ENST00000324340 ORC4O43929 436 aa15.01□□□□□ -0.01
DDX39A-202ENST00000324340 SLC3A2P08195 630 aaKnown RBP15.01□□□□□ -0.01
DDX39A-202ENST00000324340 YBX3P16989 372 aaKnown RBP eCLIP15.01□□□□□ -0.012e-7■□□□□ 10
DDX39A-202ENST00000324340 EVCP57679 992 aa15.01□□□□□ -0.01
DDX39A-202ENST00000324340 CFAP100Q494V2 611 aa15.01□□□□□ -0.01
DDX39A-202ENST00000324340 MAPKAPK5Q8IW41 473 aa15.01□□□□□ -0.01
DDX39A-202ENST00000324340 AMOTL1Q8IY63 956 aa15.01□□□□□ -0.01
DDX39A-202ENST00000324340 OGFOD1Q8N543 542 aa15.01□□□□□ -0.01
DDX39A-202ENST00000324340 NKX2-3Q8TAU0 364 aa15.01□□□□□ -0.01
DDX39A-202ENST00000324340 SH2B1Q9NRF2 756 aaPredicted RBP15.01□□□□□ -0.01
DDX39A-202ENST00000324340 TPCN1Q9ULQ1 816 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms