RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 BCL9O00512 1426 aa11.79□□□□□ -0.52
SF3B2-201ENST00000322535 ADAMTS7Q9UKP4 1686 aa11.79□□□□□ -0.52
SF3B2-201ENST00000322535 ERLIN2O94905 339 aa11.79□□□□□ -0.52
SF3B2-201ENST00000322535 OATP04181 439 aa11.79□□□□□ -0.52
SF3B2-201ENST00000322535 CCDC83Q8IWF9 413 aa11.79□□□□□ -0.52
SF3B2-201ENST00000322535 FNBP4Q8N3X1 1017 aaPredicted RBP11.79□□□□□ -0.52
SF3B2-201ENST00000322535 QTRT2Q9H974 415 aaKnown RBP11.79□□□□□ -0.52
SF3B2-201ENST00000322535 SPATS2LQ9NUQ6 558 aaKnown RBP11.79□□□□□ -0.52
SF3B2-201ENST00000322535 LMCD1Q9NZU5 365 aa11.79□□□□□ -0.52
SF3B2-201ENST00000322535 FAN1Q9Y2M0 1017 aa11.79□□□□□ -0.52
SF3B2-201ENST00000322535 PCDHGA4Q9Y5G9 962 aa11.79□□□□□ -0.52
SF3B2-201ENST00000322535 STARD3NLO95772 234 aa11.79□□□□□ -0.52
SF3B2-201ENST00000322535 ATP2B2Q01814 1243 aa11.79□□□□□ -0.52
SF3B2-201ENST00000322535 VPS72Q15906 364 aa11.79□□□□□ -0.52
SF3B2-201ENST00000322535 E4F1Q66K89 784 aaPredicted RBP11.79□□□□□ -0.52
SF3B2-201ENST00000322535 TTC6Q86TZ1 520 aa11.79□□□□□ -0.52
SF3B2-201ENST00000322535 BICD2Q8TD16 824 aa11.79□□□□□ -0.52
SF3B2-201ENST00000322535 IRX2Q9BZI1 471 aaPredicted RBP11.79□□□□□ -0.52
SF3B2-201ENST00000322535 MRC1P22897 1456 aa11.79□□□□□ -0.52
SF3B2-201ENST00000322535 KCPQ6ZWJ8 1503 aa11.79□□□□□ -0.52
SF3B2-201ENST00000322535 LOC102724428A0A0B4J2F2 783 aa11.78□□□□□ -0.52
SF3B2-201ENST00000322535 ELP1O95163 1332 aa11.78□□□□□ -0.52
SF3B2-201ENST00000322535 CYP19A1P11511 503 aaPredicted RBP11.78□□□□□ -0.52
SF3B2-201ENST00000322535 SIK1P57059 783 aa11.78□□□□□ -0.52
SF3B2-201ENST00000322535 ARMC2Q8NEN0 867 aa11.78□□□□□ -0.52
SF3B2-201ENST00000322535 TDRD7Q8NHU6 1098 aaKnown RBP11.78□□□□□ -0.52
SF3B2-201ENST00000322535 CCDC102AQ96A19 550 aa11.78□□□□□ -0.52
SF3B2-201ENST00000322535 GJD4Q96KN9 370 aaPredicted RBP11.78□□□□□ -0.52
SF3B2-201ENST00000322535 TNS2Q63HR2 1409 aa11.78□□□□□ -0.52
SF3B2-201ENST00000322535 GOLGA6CA6NDK9 693 aa11.78□□□□□ -0.52
SF3B2-201ENST00000322535 GOLGA6BA6NDN3 693 aa11.78□□□□□ -0.52
SF3B2-201ENST00000322535 SGSM2O43147 1006 aa11.78□□□□□ -0.52
SF3B2-201ENST00000322535 NEMFO60524 1076 aa11.78□□□□□ -0.52
SF3B2-201ENST00000322535 GOLGA6DP0CG33 693 aa11.78□□□□□ -0.52
SF3B2-201ENST00000322535 CCDC93Q567U6 631 aa11.78□□□□□ -0.52
SF3B2-201ENST00000322535 PLBD2Q8NHP8 589 aa11.78□□□□□ -0.52
SF3B2-201ENST00000322535 LRRCC1Q9C099 1032 aa11.78□□□□□ -0.52
SF3B2-201ENST00000322535 GOLGA6AQ9NYA3 693 aa11.78□□□□□ -0.52
SF3B2-201ENST00000322535 THRAP3Q9Y2W1 955 aaKnown RBP11.78□□□□□ -0.52
SF3B2-201ENST00000322535 SNUPNO95149 360 aaKnown RBP11.77□□□□□ -0.52
SF3B2-201ENST00000322535 GJB2P29033 226 aa11.77□□□□□ -0.52
SF3B2-201ENST00000322535 NAP1L1P55209 391 aaKnown RBP11.77□□□□□ -0.52
SF3B2-201ENST00000322535 USP4Q13107 963 aa11.77□□□□□ -0.52
SF3B2-201ENST00000322535 SLC5A9Q2M3M2 681 aa11.77□□□□□ -0.52
SF3B2-201ENST00000322535 RPUSD2Q8IZ73 545 aaKnown RBP11.77□□□□□ -0.52
SF3B2-201ENST00000322535 ZNF594Q96JF6 807 aaPredicted RBP11.77□□□□□ -0.52
SF3B2-201ENST00000322535 FUT8Q9BYC5 575 aa11.77□□□□□ -0.52
SF3B2-201ENST00000322535 PARD6BQ9BYG5 372 aa11.77□□□□□ -0.52
SF3B2-201ENST00000322535 TMEM165Q9HC07 324 aa11.77□□□□□ -0.52
SF3B2-201ENST00000322535 ITGB4P16144 1822 aa11.77□□□□□ -0.53
SF3B2-201ENST00000322535 IFIT2P09913 472 aaKnown RBP11.77□□□□□ -0.53
SF3B2-201ENST00000322535 SEPT12Q8IYM1 358 aa11.77□□□□□ -0.53
SF3B2-201ENST00000322535 ZNF396Q96N95 335 aaPredicted RBP11.77□□□□□ -0.53
SF3B2-201ENST00000322535 CD248Q9HCU0 757 aa11.77□□□□□ -0.53
SF3B2-201ENST00000322535 CACNA1FO60840 1977 aa11.77□□□□□ -0.53
SF3B2-201ENST00000322535 TADA3O75528 432 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 CHMLP26374 656 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 GCKP35557 465 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 PEX19P40855 299 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 LONRF2Q1L5Z9 754 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 LMBR1LQ6UX01 489 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 BICDL1Q6ZP65 573 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 BARGINQ6ZT62 677 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 C11orf57Q6ZUT1 292 aaPredicted RBP11.76□□□□□ -0.53
SF3B2-201ENST00000322535 CCDC24Q8N4L8 307 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 C3orf20Q8ND61 904 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 ESYT1Q9BSJ8 1104 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 NR1I2O75469 434 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 RPS6KA5O75582 802 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 CRKLP46109 303 aaKnown RBP11.76□□□□□ -0.53
SF3B2-201ENST00000322535 SSH3Q8TE77 659 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 YIPF2Q9BWQ6 316 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 NDUFB9Q9Y6M9 179 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 ALDH1L1O75891 902 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 NF2P35240 595 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 CCDC158Q5M9N0 1113 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 MYLK4Q86YV6 388 aaPredicted RBP11.76□□□□□ -0.53
SF3B2-201ENST00000322535 DRAXINQ8NBI3 349 aaPredicted RBP11.76□□□□□ -0.53
SF3B2-201ENST00000322535 MRFAP1L1Q96HT8 127 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 CCDC8Q9H0W5 538 aaPredicted RBP11.76□□□□□ -0.53
SF3B2-201ENST00000322535 SUGCTQ9HAC7 445 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 AKAP2Q9Y2D5 859 aa11.76□□□□□ -0.53
SF3B2-201ENST00000322535 USP8P40818 1118 aa11.75□□□□□ -0.53
SF3B2-201ENST00000322535 CEBPZQ03701 1054 aaKnown RBP11.75□□□□□ -0.53
SF3B2-201ENST00000322535 CRYMQ14894 314 aa11.75□□□□□ -0.53
SF3B2-201ENST00000322535 MYSM1Q5VVJ2 828 aa11.75□□□□□ -0.53
SF3B2-201ENST00000322535 TMC6Q7Z403 805 aa11.75□□□□□ -0.53
SF3B2-201ENST00000322535 RHPN1Q8TCX5 695 aa11.75□□□□□ -0.53
SF3B2-201ENST00000322535 TACO1Q9BSH4 297 aaKnown RBP11.75□□□□□ -0.53
SF3B2-201ENST00000322535 BLOC1S6Q9UL45 172 aa11.75□□□□□ -0.53
SF3B2-201ENST00000322535 PALLDQ8WX93 1383 aa11.75□□□□□ -0.53
SF3B2-201ENST00000322535 SPATA31A6Q5VVP1 1343 aa11.75□□□□□ -0.53
SF3B2-201ENST00000322535 LARGE1O95461 756 aa11.75□□□□□ -0.53
SF3B2-201ENST00000322535 AK2P54819 239 aa11.75□□□□□ -0.53
SF3B2-201ENST00000322535 KRT85P78386 507 aa11.75□□□□□ -0.53
SF3B2-201ENST00000322535 RBBP5Q15291 538 aaKnown RBP11.75□□□□□ -0.53
SF3B2-201ENST00000322535 AMIGO3Q86WK7 504 aa11.75□□□□□ -0.53
SF3B2-201ENST00000322535 DZIP3Q86Y13 1208 aaKnown RBP11.75□□□□□ -0.53
SF3B2-201ENST00000322535 CNNM3Q8NE01 707 aa11.75□□□□□ -0.53
SF3B2-201ENST00000322535 ODF2LQ9ULJ1 636 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms