RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 CCDC178Q5BJE1 867 aa18.62■□□□□ 0.57
SFXN1-201ENST00000321442 EPHA10Q5JZY3 1008 aa18.62■□□□□ 0.57
SFXN1-201ENST00000321442 MYSM1Q5VVJ2 828 aa18.62■□□□□ 0.57
SFXN1-201ENST00000321442 RASSF4Q9H2L5 321 aa18.62■□□□□ 0.57
SFXN1-201ENST00000321442 IVLP07476 585 aa18.62■□□□□ 0.57
SFXN1-201ENST00000321442 NDUFA8P51970 172 aa18.62■□□□□ 0.57
SFXN1-201ENST00000321442 ZNF827Q17R98 1081 aa18.62■□□□□ 0.57
SFXN1-201ENST00000321442 GREM2Q9H772 168 aa18.62■□□□□ 0.57
SFXN1-201ENST00000321442 ARHGAP6O43182 974 aa18.61■□□□□ 0.57
SFXN1-201ENST00000321442 GTF2A1P52655 376 aaPredicted RBP18.61■□□□□ 0.57
SFXN1-201ENST00000321442 PPARDQ03181 441 aa18.61■□□□□ 0.57
SFXN1-201ENST00000321442 PICALMQ13492 652 aa18.61■□□□□ 0.57
SFXN1-201ENST00000321442 ADALQ6DHV7 355 aa18.61■□□□□ 0.57
SFXN1-201ENST00000321442 MAATS1Q7Z4T9 603 aa18.61■□□□□ 0.57
SFXN1-201ENST00000321442 SCRN1Q12765 414 aa18.61■□□□□ 0.57
SFXN1-201ENST00000321442 GPIHBP1Q8IV16 184 aa18.61■□□□□ 0.57
SFXN1-201ENST00000321442 TSPY2A6NKD2 308 aa18.61■□□□□ 0.57
SFXN1-201ENST00000321442 TRMT1LQ7Z2T5 733 aaKnown RBP18.61■□□□□ 0.57
SFXN1-201ENST00000321442 PNPLA6Q8IY17 1366 aa18.61■□□□□ 0.57
SFXN1-201ENST00000321442 UBXN1Q04323 297 aa18.6■□□□□ 0.57
SFXN1-201ENST00000321442 DPCR1Q3MIW9 517 aa18.6■□□□□ 0.57
SFXN1-201ENST00000321442 HELLSQ9NRZ9 838 aa18.6■□□□□ 0.57
SFXN1-201ENST00000321442 ADD1P35611 737 aaKnown RBP18.6■□□□□ 0.57
SFXN1-201ENST00000321442 SMC1AQ14683 1233 aaKnown RBP18.6■□□□□ 0.57
SFXN1-201ENST00000321442 KRT40Q6A162 431 aa18.6■□□□□ 0.57
SFXN1-201ENST00000321442 TRIM37O94972 964 aa18.6■□□□□ 0.57
SFXN1-201ENST00000321442 CYP21A2P08686 494 aa18.6■□□□□ 0.57
SFXN1-201ENST00000321442 PFKFB1P16118 471 aa18.6■□□□□ 0.57
SFXN1-201ENST00000321442 TCP11L1Q9NUJ3 509 aa18.6■□□□□ 0.57
SFXN1-201ENST00000321442 PTCH1Q13635 1447 aa18.6■□□□□ 0.57
SFXN1-201ENST00000321442 ZEB2O60315 1214 aa18.6■□□□□ 0.57
SFXN1-201ENST00000321442 CRKLP46109 303 aaKnown RBP18.6■□□□□ 0.57
SFXN1-201ENST00000321442 DIS3L2Q8IYB7 885 aaKnown RBP18.6■□□□□ 0.57
SFXN1-201ENST00000321442 LRRC7Q96NW7 1537 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 VWA3AA6NCI4 1184 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 TMCO5BA8MYB1 307 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 ADORA1P30542 326 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 HDXQ7Z353 690 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 SEC31BQ9NQW1 1179 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 GPAA1O43292 621 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 STAT6P42226 847 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 NOP2P46087 812 aaKnown RBP18.59■□□□□ 0.57
SFXN1-201ENST00000321442 SPAG1Q07617 926 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 NCBP1Q09161 790 aaKnown RBP18.59■□□□□ 0.57
SFXN1-201ENST00000321442 HLFQ16534 295 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 CRACR2BQ8N4Y2 399 aaPredicted RBP18.59■□□□□ 0.57
SFXN1-201ENST00000321442 PI4K2BQ8TCG2 481 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 UBA5Q9GZZ9 404 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 FANCLQ9NW38 375 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 ADGRB1O14514 1584 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 ATP5JP18859 108 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 ANGEL1Q9UNK9 670 aaKnown RBP18.59■□□□□ 0.57
SFXN1-201ENST00000321442 KCNJ14Q9UNX9 436 aa18.59■□□□□ 0.57
SFXN1-201ENST00000321442 CYLC1P35663 651 aaPredicted RBP18.58■□□□□ 0.57
SFXN1-201ENST00000321442 USPL1Q5W0Q7 1092 aa18.58■□□□□ 0.57
SFXN1-201ENST00000321442 hCG_1642624A0A1W2PR95 340 aa18.58■□□□□ 0.56
SFXN1-201ENST00000321442 IGKV5-2P06315 115 aa18.58■□□□□ 0.56
SFXN1-201ENST00000321442 SYCP1Q15431 976 aa18.58■□□□□ 0.56
SFXN1-201ENST00000321442 ZNF174Q15697 407 aa18.58■□□□□ 0.56
SFXN1-201ENST00000321442 CNBD1Q8NA66 436 aa18.58■□□□□ 0.56
SFXN1-201ENST00000321442 GIMAP7Q8NHV1 300 aa18.58■□□□□ 0.56
SFXN1-201ENST00000321442 ATRIPQ8WXE1 791 aa18.58■□□□□ 0.56
SFXN1-201ENST00000321442 MBD4O95243 580 aa18.58■□□□□ 0.56
SFXN1-201ENST00000321442 IFFO1Q0D2I5 559 aa18.58■□□□□ 0.56
SFXN1-201ENST00000321442 CCDC122Q5T0U0 273 aa18.58■□□□□ 0.56
SFXN1-201ENST00000321442 ALS2CR12Q96Q35 445 aa18.58■□□□□ 0.56
SFXN1-201ENST00000321442 KRT23Q9C075 422 aa18.58■□□□□ 0.56
SFXN1-201ENST00000321442 MMRN2Q9H8L6 949 aa18.58■□□□□ 0.56
SFXN1-201ENST00000321442 QTRT2Q9H974 415 aaKnown RBP18.58■□□□□ 0.56
SFXN1-201ENST00000321442 CLIC4Q9Y696 253 aa18.58■□□□□ 0.56
SFXN1-201ENST00000321442 MROH2AA6NES4 1674 aa18.58■□□□□ 0.56
SFXN1-201ENST00000321442 PDE8AO60658 829 aa18.57■□□□□ 0.56
SFXN1-201ENST00000321442 SEC31AO94979 1220 aaKnown RBP18.57■□□□□ 0.56
SFXN1-201ENST00000321442 IFIT1BQ5T764 474 aaKnown RBP18.57■□□□□ 0.56
SFXN1-201ENST00000321442 ZNF444Q8N0Y2 327 aaPredicted RBP18.57■□□□□ 0.56
SFXN1-201ENST00000321442 LUC7L2Q9Y383 392 aaKnown RBP18.57■□□□□ 0.56
SFXN1-201ENST00000321442 ST5P78524 1137 aa18.57■□□□□ 0.56
SFXN1-201ENST00000321442 CLIC6Q96NY7 704 aa18.57■□□□□ 0.56
SFXN1-201ENST00000321442 ARMT1Q9H993 441 aa18.57■□□□□ 0.56
SFXN1-201ENST00000321442 MCM7P33993 719 aa18.57■□□□□ 0.56
SFXN1-201ENST00000321442 ARID5AQ03989 594 aa18.57■□□□□ 0.56
SFXN1-201ENST00000321442 ZSCAN26Q16670 478 aa18.57■□□□□ 0.56
SFXN1-201ENST00000321442 ESR2Q92731 530 aa18.57■□□□□ 0.56
SFXN1-201ENST00000321442 DBNLQ9UJU6 430 aaKnown RBP18.57■□□□□ 0.56
SFXN1-201ENST00000321442 APBA3O96018 575 aa18.57■□□□□ 0.56
SFXN1-201ENST00000321442 GYG1P46976 350 aa18.57■□□□□ 0.56
SFXN1-201ENST00000321442 KIF5AQ12840 1032 aa18.57■□□□□ 0.56
SFXN1-201ENST00000321442 GOPCQ9HD26 462 aa18.57■□□□□ 0.56
SFXN1-201ENST00000321442 SRP68Q9UHB9 627 aaKnown RBP18.57■□□□□ 0.56
SFXN1-201ENST00000321442 MACROD2A1Z1Q3 448 aa18.56■□□□□ 0.56
SFXN1-201ENST00000321442 UQCRFS1P1P0C7P4 283 aa18.56■□□□□ 0.56
SFXN1-201ENST00000321442 FBXO38Q6PIJ6 1188 aa18.56■□□□□ 0.56
SFXN1-201ENST00000321442 MYO3AQ8NEV4 1616 aa18.56■□□□□ 0.56
SFXN1-201ENST00000321442 EBAG9O00559 213 aa18.56■□□□□ 0.56
SFXN1-201ENST00000321442 KRT86O43790 486 aa18.56■□□□□ 0.56
SFXN1-201ENST00000321442 CCDC40Q4G0X9 1142 aa18.56■□□□□ 0.56
SFXN1-201ENST00000321442 CCDC42Q96M95 316 aa18.56■□□□□ 0.56
SFXN1-201ENST00000321442 PSMA7O14818 248 aa18.56■□□□□ 0.56
SFXN1-201ENST00000321442 PRPF4BQ13523 1007 aaKnown RBP18.56■□□□□ 0.56
SFXN1-201ENST00000321442 UTP14CQ5TAP6 766 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms