RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 NUP62CLQ9H1M0 184 aa18.58■□□□□ 0.57
SHISA2-201ENST00000319420 CFAP45Q9UL16 551 aa18.58■□□□□ 0.57
SHISA2-201ENST00000319420 KIF28PB7ZC32 967 aa18.58■□□□□ 0.56
SHISA2-201ENST00000319420 RIMBP2O15034 1052 aa18.58■□□□□ 0.56
SHISA2-201ENST00000319420 ST5P78524 1137 aa18.58■□□□□ 0.56
SHISA2-201ENST00000319420 GPSM2P81274 684 aa18.58■□□□□ 0.56
SHISA2-201ENST00000319420 FUCA2Q9BTY2 467 aa18.58■□□□□ 0.56
SHISA2-201ENST00000319420 TNMDQ9H2S6 317 aa18.58■□□□□ 0.56
SHISA2-201ENST00000319420 USP25Q9UHP3 1055 aa18.58■□□□□ 0.56
SHISA2-201ENST00000319420 RREB1Q92766 1687 aa18.57■□□□□ 0.56
SHISA2-201ENST00000319420 SF3A1Q15459 793 aaKnown RBP18.57■□□□□ 0.56
SHISA2-201ENST00000319420 ZNF219Q9P2Y4 722 aaPredicted RBP18.57■□□□□ 0.56
SHISA2-201ENST00000319420 PNPLA7Q6ZV29 1317 aa18.57■□□□□ 0.56
SHISA2-201ENST00000319420 ATP2B1P20020 1258 aa18.57■□□□□ 0.56
SHISA2-201ENST00000319420 GUCY1A2P33402 732 aa18.57■□□□□ 0.56
SHISA2-201ENST00000319420 IARSP41252 1262 aaKnown RBP18.57■□□□□ 0.56
SHISA2-201ENST00000319420 EVCP57679 992 aa18.57■□□□□ 0.56
SHISA2-201ENST00000319420 ALX1Q15699 326 aa18.57■□□□□ 0.56
SHISA2-201ENST00000319420 FBXO18Q8NFZ0 1043 aa18.57■□□□□ 0.56
SHISA2-201ENST00000319420 KRT23Q9C075 422 aa18.57■□□□□ 0.56
SHISA2-201ENST00000319420 CLIC4Q9Y696 253 aa18.57■□□□□ 0.56
SHISA2-201ENST00000319420 SART3Q15020 963 aaKnown RBP18.56■□□□□ 0.56
SHISA2-201ENST00000319420 TMEM87BQ96K49 555 aa18.56■□□□□ 0.56
SHISA2-201ENST00000319420 ZMYM6O95789 1325 aa18.56■□□□□ 0.56
SHISA2-201ENST00000319420 THSD7AQ9UPZ6 1657 aa18.56■□□□□ 0.56
SHISA2-201ENST00000319420 CPLX2Q6PUV4 134 aaKnown RBP18.56■□□□□ 0.56
SHISA2-201ENST00000319420 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.56■□□□□ 0.56
SHISA2-201ENST00000319420 BCORQ6W2J9 1755 aa18.56■□□□□ 0.56
SHISA2-201ENST00000319420 PDIA4P13667 645 aaKnown RBP18.56■□□□□ 0.56
SHISA2-201ENST00000319420 MARCKSP29966 332 aaPredicted RBP18.56■□□□□ 0.56
SHISA2-201ENST00000319420 CNNM2Q9H8M5 875 aa18.56■□□□□ 0.56
SHISA2-201ENST00000319420 MCM9Q9NXL9 1143 aa18.56■□□□□ 0.56
SHISA2-201ENST00000319420 KCNJ14Q9UNX9 436 aa18.56■□□□□ 0.56
SHISA2-201ENST00000319420 ELP1O95163 1332 aa18.55■□□□□ 0.56
SHISA2-201ENST00000319420 F8W031 263 aaPredicted RBP18.55■□□□□ 0.56
SHISA2-201ENST00000319420 USP17L8P0C7I0 530 aa18.55■□□□□ 0.56
SHISA2-201ENST00000319420 ZNF827Q17R98 1081 aa18.55■□□□□ 0.56
SHISA2-201ENST00000319420 ZSCAN30Q86W11 494 aa18.55■□□□□ 0.56
SHISA2-201ENST00000319420 CCAR1Q8IX12 1150 aaKnown RBP18.55■□□□□ 0.56
SHISA2-201ENST00000319420 STAG1Q8WVM7 1258 aa18.55■□□□□ 0.56
SHISA2-201ENST00000319420 FAM217BQ9NTX9 383 aaPredicted RBP18.55■□□□□ 0.56
SHISA2-201ENST00000319420 TNKSO95271 1327 aa18.55■□□□□ 0.56
SHISA2-201ENST00000319420 CTR9Q6PD62 1173 aa18.55■□□□□ 0.56
SHISA2-201ENST00000319420 LDHBP07195 334 aaKnown RBP18.54■□□□□ 0.56
SHISA2-201ENST00000319420 STK38Q15208 465 aa18.54■□□□□ 0.56
SHISA2-201ENST00000319420 SAP30BPQ9UHR5 308 aaKnown RBP18.54■□□□□ 0.56
SHISA2-201ENST00000319420 BAZ2BQ9UIF8 2168 aaKnown RBP18.54■□□□□ 0.56
SHISA2-201ENST00000319420 LETM1O95202 739 aaPredicted RBP18.54■□□□□ 0.56
SHISA2-201ENST00000319420 MAP3K11Q16584 847 aa18.54■□□□□ 0.56
SHISA2-201ENST00000319420 KRT40Q6A162 431 aa18.54■□□□□ 0.56
SHISA2-201ENST00000319420 ESR2Q92731 530 aa18.54■□□□□ 0.56
SHISA2-201ENST00000319420 C4BP0C0L5 1744 aa18.54■□□□□ 0.56
SHISA2-201ENST00000319420 A0A1B0GVL5 298 aa18.53■□□□□ 0.56
SHISA2-201ENST00000319420 PTMAP06454 111 aaKnown RBP18.53■□□□□ 0.56
SHISA2-201ENST00000319420 USP5P45974 858 aa18.53■□□□□ 0.56
SHISA2-201ENST00000319420 RTN1Q16799 776 aa18.53■□□□□ 0.56
SHISA2-201ENST00000319420 ZNF396Q96N95 335 aaPredicted RBP18.53■□□□□ 0.56
SHISA2-201ENST00000319420 GOLPH3LQ9H4A5 285 aa18.53■□□□□ 0.56
SHISA2-201ENST00000319420 RNF41Q9H4P4 317 aaPredicted RBP18.53■□□□□ 0.56
SHISA2-201ENST00000319420 NHSQ6T4R5 1651 aa18.53■□□□□ 0.56
SHISA2-201ENST00000319420 XDHP47989 1333 aa18.53■□□□□ 0.56
SHISA2-201ENST00000319420 FBXL16Q8N461 479 aa18.53■□□□□ 0.56
SHISA2-201ENST00000319420 DYNLL2Q96FJ2 89 aa18.53■□□□□ 0.56
SHISA2-201ENST00000319420 DCP1AQ9NPI6 582 aaPredicted RBP18.53■□□□□ 0.56
SHISA2-201ENST00000319420 CRNKL1Q9BZJ0 848 aaKnown RBP18.52■□□□□ 0.56
SHISA2-201ENST00000319420 TRIM29Q14134 588 aa18.52■□□□□ 0.56
SHISA2-201ENST00000319420 ZNF654Q8IZM8 581 aa18.52■□□□□ 0.56
SHISA2-201ENST00000319420 FSIP1Q8NA03 581 aa18.52■□□□□ 0.56
SHISA2-201ENST00000319420 AP5Z1O43299 807 aa18.52■□□□□ 0.55
SHISA2-201ENST00000319420 SSRP1Q08945 709 aaKnown RBP18.52■□□□□ 0.55
SHISA2-201ENST00000319420 SH3RF3Q8TEJ3 882 aaPredicted RBP18.52■□□□□ 0.55
SHISA2-201ENST00000319420 TGFBRAP1Q8WUH2 860 aa18.52■□□□□ 0.55
SHISA2-201ENST00000319420 SCN7AQ01118 1682 aa18.51■□□□□ 0.55
SHISA2-201ENST00000319420 CICQ96RK0 1608 aaPredicted RBP18.51■□□□□ 0.55
SHISA2-201ENST00000319420 CDKL5O76039 1030 aa18.51■□□□□ 0.55
SHISA2-201ENST00000319420 ENAHQ8N8S7 591 aaPredicted RBP18.51■□□□□ 0.55
SHISA2-201ENST00000319420 POLLQ9UGP5 575 aa18.51■□□□□ 0.55
SHISA2-201ENST00000319420 GGA1Q9UJY5 639 aa18.51■□□□□ 0.55
SHISA2-201ENST00000319420 TNRC6CQ9HCJ0 1690 aaKnown RBP18.51■□□□□ 0.55
SHISA2-201ENST00000319420 ADRA2BP18089 450 aa18.51■□□□□ 0.55
SHISA2-201ENST00000319420 KIF23Q02241 960 aaPredicted RBP18.51■□□□□ 0.55
SHISA2-201ENST00000319420 NTRK3Q16288 839 aa18.51■□□□□ 0.55
SHISA2-201ENST00000319420 IFIT1BQ5T764 474 aaKnown RBP18.51■□□□□ 0.55
SHISA2-201ENST00000319420 MYSM1Q5VVJ2 828 aa18.51■□□□□ 0.55
SHISA2-201ENST00000319420 ZNF804AQ7Z570 1209 aa18.51■□□□□ 0.55
SHISA2-201ENST00000319420 COL23A1Q86Y22 540 aaPredicted RBP18.51■□□□□ 0.55
SHISA2-201ENST00000319420 MAPKAPK5Q8IW41 473 aa18.51■□□□□ 0.55
SHISA2-201ENST00000319420 SLC44A5Q8NCS7 719 aa18.51■□□□□ 0.55
SHISA2-201ENST00000319420 PCDHA7Q9UN72 937 aa18.51■□□□□ 0.55
SHISA2-201ENST00000319420 POLRMTO00411 1230 aaKnown RBP18.5■□□□□ 0.55
SHISA2-201ENST00000319420 CCDC192P0DO97 292 aa18.5■□□□□ 0.55
SHISA2-201ENST00000319420 LIFRP42702 1097 aa18.5■□□□□ 0.55
SHISA2-201ENST00000319420 SLC27A3Q5K4L6 730 aa18.5■□□□□ 0.55
SHISA2-201ENST00000319420 LUZP1Q86V48 1076 aa18.5■□□□□ 0.55
SHISA2-201ENST00000319420 SGMS1Q86VZ5 419 aa18.5■□□□□ 0.55
SHISA2-201ENST00000319420 RBM17Q96I25 401 aaKnown RBP18.5■□□□□ 0.55
SHISA2-201ENST00000319420 BAZ2AQ9UIF9 1905 aaKnown RBP18.5■□□□□ 0.55
SHISA2-201ENST00000319420 CCDC73Q6ZRK6 1079 aa18.5■□□□□ 0.55
SHISA2-201ENST00000319420 TSPY2A6NKD2 308 aa18.49■□□□□ 0.55
SHISA2-201ENST00000319420 TYRO3Q06418 890 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms