RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 SCLT1Q96NL6 688 aa13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 ARFGEF2Q9Y6D5 1785 aa13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 SLC15A2Q16348 729 aa13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 PLEKHM2Q8IWE5 1019 aa13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 HDXQ7Z353 690 aa13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 ZNF34Q8IZ26 560 aa13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 OTUD7AQ8TE49 926 aaPredicted RBP13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 UPF1Q92900 1129 aaKnown RBP eCLIP13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 PUF60Q9UHX1 559 aaKnown RBP13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 RGL2O15211 777 aa13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 ATP8B1O43520 1251 aa13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 CCDC158Q5M9N0 1113 aa13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 SWT1Q5T5J6 900 aaKnown RBP13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 PPP1R42Q7Z4L9 355 aa13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 SETDB2Q96T68 719 aa13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 SDF4Q9BRK5 362 aa13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 RPSAP08865 295 aaKnown RBP13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 INTS4Q96HW7 963 aaKnown RBP13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 PSMD1Q99460 953 aa13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 RGPD3A6NKT7 1758 aaPredicted RBP13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 RGPD4Q7Z3J3 1758 aa13.36□□□□□ -0.27
LDLRAD3-201ENST00000315571 EZRP15311 586 aaKnown RBP13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 TSHZ3Q63HK5 1081 aa13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 RPAP2Q8IXW5 612 aaPredicted RBP13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 UTP14AQ9BVJ6 771 aaKnown RBP13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 RHOXF2BP0C7M4 288 aa13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 FOSBP53539 338 aa13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 RBBP5Q15291 538 aaKnown RBP13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 FAM89AQ96GI7 184 aa13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 RHOXF2Q9BQY4 288 aa13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 UBN2Q6ZU65 1347 aa13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 EFCAB8A8MWE9 144 aa13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 IPO7O95373 1038 aaKnown RBP13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 LRRFIP1Q32MZ4 808 aaKnown RBP13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 TBC1D9BQ66K14 1250 aa13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 KIRREL3Q8IZU9 778 aa13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 GOLGA1Q92805 767 aa13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 SUCLG2Q96I99 432 aa13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 PARD6BQ9BYG5 372 aa13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 NUP188Q5SRE5 1749 aa13.35□□□□□ -0.27
LDLRAD3-201ENST00000315571 H7C1W4 665 aa13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 PCCAP05165 728 aaPredicted RBP13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 ETF1P62495 437 aaKnown RBP13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 WWC2Q6AWC2 1192 aa13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 COL23A1Q86Y22 540 aaPredicted RBP13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 GPR161Q8N6U8 529 aaKnown RBP13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 ZBTB38Q8NAP3 1195 aaPredicted RBP13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 UTYO14607 1347 aa13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 KIF3CO14782 793 aa13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 TBC1D8O95759 1140 aa13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 CEP85Q6P2H3 762 aa13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 CCDC73Q6ZRK6 1079 aa13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 CABS1Q96KC9 395 aa13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 FAM204AQ9H8W3 233 aa13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 PPFIA4O75335 1185 aa13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 SASH3O75995 380 aa13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 SUSD4Q5VX71 490 aa13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 ANKRD44Q8N8A2 993 aa13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.34□□□□□ -0.27
LDLRAD3-201ENST00000315571 SKAP2O75563 359 aaPredicted RBP13.33□□□□□ -0.27
LDLRAD3-201ENST00000315571 NBPF9Q3BBW0 867 aa13.33□□□□□ -0.27
LDLRAD3-201ENST00000315571 CEP57L1Q8IYX8 460 aa13.33□□□□□ -0.27
LDLRAD3-201ENST00000315571 AFAP1L1Q8TED9 768 aa13.33□□□□□ -0.27
LDLRAD3-201ENST00000315571 CCDC12Q8WUD4 166 aaPredicted RBP13.33□□□□□ -0.27
LDLRAD3-201ENST00000315571 PPP1R13BQ96KQ4 1090 aa13.33□□□□□ -0.27
LDLRAD3-201ENST00000315571 PNPLA7Q6ZV29 1317 aa13.33□□□□□ -0.28
LDLRAD3-201ENST00000315571 SH3TC1Q8TE82 1336 aa13.33□□□□□ -0.28
LDLRAD3-201ENST00000315571 H3BQV1 296 aa13.33□□□□□ -0.28
LDLRAD3-201ENST00000315571 KINO60870 393 aaKnown RBP13.33□□□□□ -0.28
LDLRAD3-201ENST00000315571 GYS1P13807 737 aa13.33□□□□□ -0.28
LDLRAD3-201ENST00000315571 GJB2P29033 226 aa13.33□□□□□ -0.28
LDLRAD3-201ENST00000315571 IRX1P78414 480 aaPredicted RBP13.33□□□□□ -0.28
LDLRAD3-201ENST00000315571 IFFO2Q5TF58 517 aa13.33□□□□□ -0.28
LDLRAD3-201ENST00000315571 DDX19AQ9NUU7 478 aaKnown RBP13.33□□□□□ -0.28
LDLRAD3-201ENST00000315571 POTEDQ86YR6 584 aa13.33□□□□□ -0.28
LDLRAD3-201ENST00000315571 REXO1L1PQ8IX06 675 aa13.33□□□□□ -0.28
LDLRAD3-201ENST00000315571 KIF4AO95239 1232 aa13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 GSCP56915 257 aaPredicted RBP13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 AKAP17AQ02040 695 aaKnown RBP13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 MRFAP1L1Q96HT8 127 aa13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 IRS4O14654 1257 aaPredicted RBP13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 ACTN3Q08043 901 aaPredicted RBP13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 E2F5Q15329 346 aa13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 TEX11Q8IYF3 940 aa13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 JMYQ8N9B5 988 aa13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 NUP133Q8WUM0 1156 aa13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 MIEF2Q96C03 454 aa13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 CRACR2AQ9BSW2 395 aa13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 NYXQ9GZU5 481 aa13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 RBM5P52756 815 aaKnown RBP eCLIP13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 APOBRQ0VD83 1088 aa13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 NFIXQ14938 502 aa13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 NYAP1Q6ZVC0 841 aa13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 NLGN1Q8N2Q7 840 aa13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 AOPEPQ8N6M6 819 aa13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 N4BP2Q86UW6 1770 aaPredicted RBP13.32□□□□□ -0.28
LDLRAD3-201ENST00000315571 ATP8B2P98198 1209 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 ARMC2Q8NEN0 867 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 ZSCAN16Q9H4T2 348 aaPredicted RBP13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 MYO6Q9UM54 1294 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms