RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 ZNF112Q9UJU3 913 aa15.55■□□□□ 0.08
CKS2-201ENST00000314355 PLCG2P16885 1265 aa15.54■□□□□ 0.08
CKS2-201ENST00000314355 SOX10P56693 466 aa15.54■□□□□ 0.08
CKS2-201ENST00000314355 TBC1D9Q6ZT07 1266 aa15.54■□□□□ 0.08
CKS2-201ENST00000314355 NBPF11Q86T75 865 aa15.54■□□□□ 0.08
CKS2-201ENST00000314355 CD99L2Q8TCZ2 262 aa15.54■□□□□ 0.08
CKS2-201ENST00000314355 NSUN4Q96CB9 384 aaKnown RBP15.54■□□□□ 0.08
CKS2-201ENST00000314355 CXCL11O14625 94 aa15.53■□□□□ 0.08
CKS2-201ENST00000314355 HMMRO75330 724 aa15.53■□□□□ 0.08
CKS2-201ENST00000314355 NOL9Q5SY16 702 aaKnown RBP15.53■□□□□ 0.08
CKS2-201ENST00000314355 NAA16Q6N069 864 aaPredicted RBP15.53■□□□□ 0.08
CKS2-201ENST00000314355 FASTKD5Q7L8L6 764 aaKnown RBP15.53■□□□□ 0.08
CKS2-201ENST00000314355 OTOP1Q7RTM1 612 aa15.53■□□□□ 0.08
CKS2-201ENST00000314355 FAM43AQ8N2R8 423 aa15.53■□□□□ 0.08
CKS2-201ENST00000314355 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.53■□□□□ 0.08
CKS2-201ENST00000314355 NOP58Q9Y2X3 529 aaKnown RBP15.53■□□□□ 0.08
CKS2-201ENST00000314355 BTBD19C9JJ37 291 aa15.52■□□□□ 0.08
CKS2-201ENST00000314355 TLR2O60603 784 aa15.52■□□□□ 0.08
CKS2-201ENST00000314355 CTNND1O60716 968 aaKnown RBP15.52■□□□□ 0.08
CKS2-201ENST00000314355 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.08
CKS2-201ENST00000314355 HOXD10P28358 340 aa15.52■□□□□ 0.08
CKS2-201ENST00000314355 MCAMP43121 646 aa15.52■□□□□ 0.08
CKS2-201ENST00000314355 ANKRD23Q86SG2 305 aa15.52■□□□□ 0.08
CKS2-201ENST00000314355 ZFPM1Q8IX07 1006 aa15.52■□□□□ 0.08
CKS2-201ENST00000314355 TEX11Q8IYF3 940 aa15.52■□□□□ 0.08
CKS2-201ENST00000314355 SCYL3Q8IZE3 742 aa15.52■□□□□ 0.08
CKS2-201ENST00000314355 DBNDD2Q9BQY9 259 aa15.52■□□□□ 0.08
CKS2-201ENST00000314355 TRIM34Q9BYJ4 488 aa15.52■□□□□ 0.08
CKS2-201ENST00000314355 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.52■□□□□ 0.08
CKS2-201ENST00000314355 SNRKQ9NRH2 765 aa15.52■□□□□ 0.08
CKS2-201ENST00000314355 DDX19BQ9UMR2 479 aa15.52■□□□□ 0.08
CKS2-201ENST00000314355 PTPN22Q9Y2R2 807 aa15.52■□□□□ 0.08
CKS2-201ENST00000314355 GNRH1P01148 92 aa15.51■□□□□ 0.07
CKS2-201ENST00000314355 RLBP1P12271 317 aa15.51■□□□□ 0.07
CKS2-201ENST00000314355 RPAP2Q8IXW5 612 aaPredicted RBP15.51■□□□□ 0.07
CKS2-201ENST00000314355 PANK1Q8TE04 598 aa15.51■□□□□ 0.07
CKS2-201ENST00000314355 ZNF512BQ96KM6 892 aaPredicted RBP15.51■□□□□ 0.07
CKS2-201ENST00000314355 TMEM106CQ9BVX2 250 aa15.51■□□□□ 0.07
CKS2-201ENST00000314355 DHX36Q9H2U1 1008 aaKnown RBP15.51■□□□□ 0.07
CKS2-201ENST00000314355 ZHX2Q9Y6X8 837 aa15.51■□□□□ 0.07
CKS2-201ENST00000314355 DDTLA6NHG4 134 aaPredicted RBP15.5■□□□□ 0.07
CKS2-201ENST00000314355 PDHXO00330 501 aa15.5■□□□□ 0.07
CKS2-201ENST00000314355 TBC1D12O60347 775 aa15.5■□□□□ 0.07
CKS2-201ENST00000314355 CEP85Q6P2H3 762 aa15.5■□□□□ 0.07
CKS2-201ENST00000314355 PI16Q6UXB8 463 aa15.5■□□□□ 0.07
CKS2-201ENST00000314355 CERS3Q8IU89 383 aa15.5■□□□□ 0.07
CKS2-201ENST00000314355 CCDC8Q9H0W5 538 aaPredicted RBP15.5■□□□□ 0.07
CKS2-201ENST00000314355 KCNH4Q9UQ05 1017 aa15.5■□□□□ 0.07
CKS2-201ENST00000314355 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.5■□□□□ 0.07
CKS2-201ENST00000314355 MYH2Q9UKX2 1941 aa15.49■□□□□ 0.07
CKS2-201ENST00000314355 PRMT2P55345 433 aa15.49■□□□□ 0.07
CKS2-201ENST00000314355 CLASRPQ8N2M8 674 aaKnown RBP15.49■□□□□ 0.07
CKS2-201ENST00000314355 PARK7Q99497 189 aaKnown RBP15.49■□□□□ 0.07
CKS2-201ENST00000314355 OSBPL5Q9H0X9 879 aaPredicted RBP15.49■□□□□ 0.07
CKS2-201ENST00000314355 AATFQ9NY61 560 aaKnown RBP eCLIP15.49■□□□□ 0.07
CKS2-201ENST00000314355 PHF20L1A8MW92 1017 aa15.48■□□□□ 0.07
CKS2-201ENST00000314355 PTPRAP18433 802 aa15.48■□□□□ 0.07
CKS2-201ENST00000314355 RHBDL3P58872 404 aa15.48■□□□□ 0.07
CKS2-201ENST00000314355 MAP3K10Q02779 954 aa15.48■□□□□ 0.07
CKS2-201ENST00000314355 MAP3K12Q12852 859 aa15.48■□□□□ 0.07
CKS2-201ENST00000314355 GADL1Q6ZQY3 521 aa15.48■□□□□ 0.07
CKS2-201ENST00000314355 AACSQ86V21 672 aa15.48■□□□□ 0.07
CKS2-201ENST00000314355 TBC1D2Q9BYX2 928 aa15.48■□□□□ 0.07
CKS2-201ENST00000314355 AS3MTQ9HBK9 375 aa15.48■□□□□ 0.07
CKS2-201ENST00000314355 DDX4Q9NQI0 724 aaKnown RBP15.48■□□□□ 0.07
CKS2-201ENST00000314355 PI4KBQ9UBF8 816 aa15.48■□□□□ 0.07
CKS2-201ENST00000314355 HERC5Q9UII4 1024 aaKnown RBP15.48■□□□□ 0.07
CKS2-201ENST00000314355 RCAN3Q9UKA8 241 aa15.48■□□□□ 0.07
CKS2-201ENST00000314355 EXOC6BQ9Y2D4 811 aa15.48■□□□□ 0.07
CKS2-201ENST00000314355 IDH1O75874 414 aaKnown RBP15.47■□□□□ 0.07
CKS2-201ENST00000314355 HLA-DOAP06340 250 aa15.47■□□□□ 0.07
CKS2-201ENST00000314355 ZAP70P43403 619 aa15.47■□□□□ 0.07
CKS2-201ENST00000314355 TTF1Q15361 905 aaPredicted RBP15.47■□□□□ 0.07
CKS2-201ENST00000314355 SLC9C1Q4G0N8 1177 aa15.47■□□□□ 0.07
CKS2-201ENST00000314355 TMED8Q6PL24 325 aaPredicted RBP15.47■□□□□ 0.07
CKS2-201ENST00000314355 FOXP4Q8IVH2 680 aaPredicted RBP15.47■□□□□ 0.07
CKS2-201ENST00000314355 CRACR2BQ8N4Y2 399 aaPredicted RBP15.47■□□□□ 0.07
CKS2-201ENST00000314355 EAF2Q96CJ1 260 aaPredicted RBP15.47■□□□□ 0.07
CKS2-201ENST00000314355 BCL11AQ9H165 835 aa15.47■□□□□ 0.07
CKS2-201ENST00000314355 COG6Q9Y2V7 657 aa15.47■□□□□ 0.07
CKS2-201ENST00000314355 FMNL1O95466 1100 aaPredicted RBP15.46■□□□□ 0.07
CKS2-201ENST00000314355 CYP2E1P05181 493 aaPredicted RBP15.46■□□□□ 0.07
CKS2-201ENST00000314355 IFIT2P09913 472 aaKnown RBP15.46■□□□□ 0.07
CKS2-201ENST00000314355 PPP4CP60510 307 aa15.46■□□□□ 0.07
CKS2-201ENST00000314355 LACTBP83111 547 aaPredicted RBP15.46■□□□□ 0.07
CKS2-201ENST00000314355 PABPC4Q13310 644 aaKnown RBP eCLIP15.46■□□□□ 0.074e-12■■■■■ 56.2
CKS2-201ENST00000314355 SH3BP5LQ7L8J4 393 aa15.46■□□□□ 0.07
CKS2-201ENST00000314355 SH3RF3Q8TEJ3 882 aaPredicted RBP15.46■□□□□ 0.07
CKS2-201ENST00000314355 TGFBRAP1Q8WUH2 860 aa15.46■□□□□ 0.07
CKS2-201ENST00000314355 KIF1BPQ96EK5 621 aa15.46■□□□□ 0.07
CKS2-201ENST00000314355 CPA4Q9UI42 421 aa15.46■□□□□ 0.07
CKS2-201ENST00000314355 DBNLQ9UJU6 430 aaKnown RBP15.46■□□□□ 0.07
CKS2-201ENST00000314355 TRIM75PA6NK02 468 aa15.45■□□□□ 0.06
CKS2-201ENST00000314355 RAB11FIP3O75154 756 aa15.45■□□□□ 0.06
CKS2-201ENST00000314355 CYP7A1P22680 504 aa15.45■□□□□ 0.06
CKS2-201ENST00000314355 USP5P45974 858 aa15.45■□□□□ 0.06
CKS2-201ENST00000314355 SLC4A8Q2Y0W8 1093 aa15.45■□□□□ 0.06
CKS2-201ENST00000314355 C17orf99Q6UX52 265 aa15.45■□□□□ 0.06
CKS2-201ENST00000314355 RHPN1Q8TCX5 695 aa15.45■□□□□ 0.06
CKS2-201ENST00000314355 SMCR8Q8TEV9 937 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms