RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 GOLIM4O00461 696 aa21.71■■□□□ 1.07
HERPUD2-201ENST00000311350 DPF2Q92785 391 aa21.71■■□□□ 1.07
HERPUD2-201ENST00000311350 ADAM21Q9UKJ8 722 aa21.71■■□□□ 1.07
HERPUD2-201ENST00000311350 GPS2Q13227 327 aa21.71■■□□□ 1.07
HERPUD2-201ENST00000311350 NCAPHQ15003 741 aa21.71■■□□□ 1.07
HERPUD2-201ENST00000311350 ZBTB7AO95365 584 aa21.7■■□□□ 1.06
HERPUD2-201ENST00000311350 CCT2P78371 535 aaKnown RBP21.7■■□□□ 1.06
HERPUD2-201ENST00000311350 TAF7LQ5H9L4 462 aa21.7■■□□□ 1.06
HERPUD2-201ENST00000311350 KIAA1468Q9P260 1216 aa21.7■■□□□ 1.06
HERPUD2-201ENST00000311350 MAST3O60307 1309 aa21.7■■□□□ 1.06
HERPUD2-201ENST00000311350 ATP5J2-PTCD1G3V325 749 aa21.7■■□□□ 1.06
HERPUD2-201ENST00000311350 PTCD1O75127 700 aaKnown RBP21.7■■□□□ 1.06
HERPUD2-201ENST00000311350 YEATS4O95619 227 aa21.7■■□□□ 1.06
HERPUD2-201ENST00000311350 KCNJ6P48051 423 aa21.7■■□□□ 1.06
HERPUD2-201ENST00000311350 WDR24Q96S15 920 aa21.7■■□□□ 1.06
HERPUD2-201ENST00000311350 FUT8Q9BYC5 575 aa21.7■■□□□ 1.06
HERPUD2-201ENST00000311350 PARD6BQ9BYG5 372 aa21.7■■□□□ 1.06
HERPUD2-201ENST00000311350 CWC25Q9NXE8 425 aaPredicted RBP21.7■■□□□ 1.06
HERPUD2-201ENST00000311350 ITGB4P16144 1822 aa21.69■■□□□ 1.06
HERPUD2-201ENST00000311350 ERVV-2B6SEH9 535 aa21.69■■□□□ 1.06
HERPUD2-201ENST00000311350 EYA2O00167 538 aa21.69■■□□□ 1.06
HERPUD2-201ENST00000311350 SRLQ86TD4 932 aa21.69■■□□□ 1.06
HERPUD2-201ENST00000311350 KCNG4Q8TDN1 519 aa21.69■■□□□ 1.06
HERPUD2-201ENST00000311350 NCOA5Q9HCD5 579 aaKnown RBP21.69■■□□□ 1.06
HERPUD2-201ENST00000311350 FBXO3Q9UK99 471 aa21.69■■□□□ 1.06
HERPUD2-201ENST00000311350 CASQ1P31415 396 aa21.69■■□□□ 1.06
HERPUD2-201ENST00000311350 FANCCQ00597 558 aa21.69■■□□□ 1.06
HERPUD2-201ENST00000311350 FBXO18Q8NFZ0 1043 aa21.69■■□□□ 1.06
HERPUD2-201ENST00000311350 EFCC1Q9HA90 598 aa21.69■■□□□ 1.06
HERPUD2-201ENST00000311350 RRP15Q9Y3B9 282 aaKnown RBP21.69■■□□□ 1.06
HERPUD2-201ENST00000311350 TJP1Q07157 1748 aa21.68■■□□□ 1.06
HERPUD2-201ENST00000311350 VWA3AA6NCI4 1184 aa21.68■■□□□ 1.06
HERPUD2-201ENST00000311350 ATP8B1O43520 1251 aa21.68■■□□□ 1.06
HERPUD2-201ENST00000311350 TFCP2L1Q9NZI6 479 aa21.68■■□□□ 1.06
HERPUD2-201ENST00000311350 NEDD4P46934 1319 aa21.68■■□□□ 1.06
HERPUD2-201ENST00000311350 WDR19Q8NEZ3 1342 aa21.68■■□□□ 1.06
HERPUD2-201ENST00000311350 ABCC12Q96J65 1359 aa21.68■■□□□ 1.06
HERPUD2-201ENST00000311350 ZFYP08048 801 aaPredicted RBP21.68■■□□□ 1.06
HERPUD2-201ENST00000311350 IFIT1P09914 478 aaKnown RBP21.68■■□□□ 1.06
HERPUD2-201ENST00000311350 FOXR1Q6PIV2 292 aa21.68■■□□□ 1.06
HERPUD2-201ENST00000311350 BRAPQ7Z569 592 aa21.68■■□□□ 1.06
HERPUD2-201ENST00000311350 POLR3EQ9NVU0 708 aa21.68■■□□□ 1.06
HERPUD2-201ENST00000311350 HMGB2P26583 209 aaKnown RBP21.67■■□□□ 1.06
HERPUD2-201ENST00000311350 CABP4P57796 275 aa21.67■■□□□ 1.06
HERPUD2-201ENST00000311350 NEUROD6Q96NK8 337 aa21.67■■□□□ 1.06
HERPUD2-201ENST00000311350 HSD3B7Q9H2F3 369 aa21.67■■□□□ 1.06
HERPUD2-201ENST00000311350 LINC00301Q8NCQ3 95 aa21.67■■□□□ 1.06
HERPUD2-201ENST00000311350 GOLGA5Q8TBA6 731 aa21.67■■□□□ 1.06
HERPUD2-201ENST00000311350 SRRTQ9BXP5 876 aaKnown RBP21.67■■□□□ 1.06
HERPUD2-201ENST00000311350 ARFGAP3Q9NP61 516 aa21.67■■□□□ 1.06
HERPUD2-201ENST00000311350 ASAP1Q9ULH1 1129 aa21.67■■□□□ 1.06
HERPUD2-201ENST00000311350 NRDCO43847 1150 aa21.66■■□□□ 1.06
HERPUD2-201ENST00000311350 TUBB4AP04350 444 aa21.66■■□□□ 1.06
HERPUD2-201ENST00000311350 FDPSP14324 419 aaKnown RBP21.66■■□□□ 1.06
HERPUD2-201ENST00000311350 ZRSR1Q15695 479 aaKnown RBP21.66■■□□□ 1.06
HERPUD2-201ENST00000311350 OTUD7BQ6GQQ9 843 aa21.66■■□□□ 1.06
HERPUD2-201ENST00000311350 MTFR1LQ9H019 292 aa21.66■■□□□ 1.06
HERPUD2-201ENST00000311350 PPP1R1BQ9UD71 204 aaPredicted RBP21.66■■□□□ 1.06
HERPUD2-201ENST00000311350 TMEM232C9JQI7 657 aa21.66■■□□□ 1.06
HERPUD2-201ENST00000311350 ZSWIM4Q9H7M6 989 aa21.66■■□□□ 1.06
HERPUD2-201ENST00000311350 ATF5Q9Y2D1 282 aaPredicted RBP21.66■■□□□ 1.06
HERPUD2-201ENST00000311350 PPP2R3AQ06190 1150 aa21.65■■□□□ 1.06
HERPUD2-201ENST00000311350 GPR161Q8N6U8 529 aaKnown RBP21.65■■□□□ 1.06
HERPUD2-201ENST00000311350 PNPLA7Q6ZV29 1317 aa21.65■■□□□ 1.06
HERPUD2-201ENST00000311350 TPM1P09493 284 aa21.65■■□□□ 1.06
HERPUD2-201ENST00000311350 AK7Q96M32 723 aa21.65■■□□□ 1.06
HERPUD2-201ENST00000311350 CLIC4Q9Y696 253 aa21.65■■□□□ 1.06
HERPUD2-201ENST00000311350 LOC102724428A0A0B4J2F2 783 aa21.64■■□□□ 1.05
HERPUD2-201ENST00000311350 SIK1P57059 783 aa21.64■■□□□ 1.05
HERPUD2-201ENST00000311350 GNG11P61952 73 aa21.64■■□□□ 1.05
HERPUD2-201ENST00000311350 RSRC2Q7L4I2 434 aaKnown RBP21.64■■□□□ 1.05
HERPUD2-201ENST00000311350 CWC15Q9P013 229 aaKnown RBP21.64■■□□□ 1.05
HERPUD2-201ENST00000311350 M0R2C6 588 aa21.64■■□□□ 1.05
HERPUD2-201ENST00000311350 TIMM10P62072 90 aa21.64■■□□□ 1.05
HERPUD2-201ENST00000311350 MAP3K9P80192 1104 aa21.64■■□□□ 1.05
HERPUD2-201ENST00000311350 EXOC4Q96A65 974 aa21.64■■□□□ 1.05
HERPUD2-201ENST00000311350 A0A1B0GUL7 405 aa21.63■■□□□ 1.05
HERPUD2-201ENST00000311350 NBPF26B4DH59 902 aa21.63■■□□□ 1.05
HERPUD2-201ENST00000311350 IMMTQ16891 758 aaKnown RBP21.63■■□□□ 1.05
HERPUD2-201ENST00000311350 LONRF2Q1L5Z9 754 aa21.63■■□□□ 1.05
HERPUD2-201ENST00000311350 NBPF10Q6P3W6 841 aaKnown RBP21.63■■□□□ 1.05
HERPUD2-201ENST00000311350 NBPF15Q8N660 670 aa21.63■■□□□ 1.05
HERPUD2-201ENST00000311350 PPP2R2CQ9Y2T4 447 aa21.63■■□□□ 1.05
HERPUD2-201ENST00000311350 DDX60Q8IY21 1712 aaKnown RBP21.63■■□□□ 1.05
HERPUD2-201ENST00000311350 SLC3A2P08195 630 aaKnown RBP21.63■■□□□ 1.05
HERPUD2-201ENST00000311350 ACTN2P35609 894 aa21.63■■□□□ 1.05
HERPUD2-201ENST00000311350 PTGER2P43116 358 aa21.63■■□□□ 1.05
HERPUD2-201ENST00000311350 PIP4K2AP48426 406 aaPredicted RBP21.63■■□□□ 1.05
HERPUD2-201ENST00000311350 NLRP12P59046 1061 aa21.63■■□□□ 1.05
HERPUD2-201ENST00000311350 C8orf76Q96K31 380 aa21.63■■□□□ 1.05
HERPUD2-201ENST00000311350 UBR2Q8IWV8 1755 aa21.63■■□□□ 1.05
HERPUD2-201ENST00000311350 A0A0G2JLW4 131 aa21.62■■□□□ 1.05
HERPUD2-201ENST00000311350 ANKRD65E5RJM6 399 aa21.62■■□□□ 1.05
HERPUD2-201ENST00000311350 POLR3DP05423 398 aaPredicted RBP21.62■■□□□ 1.05
HERPUD2-201ENST00000311350 UBASH3AP57075 661 aa21.62■■□□□ 1.05
HERPUD2-201ENST00000311350 STK38Q15208 465 aa21.62■■□□□ 1.05
HERPUD2-201ENST00000311350 VPS18Q9P253 973 aa21.62■■□□□ 1.05
HERPUD2-201ENST00000311350 AKAP2Q9Y2D5 859 aa21.62■■□□□ 1.05
HERPUD2-201ENST00000311350 MRFAP1Q9Y605 127 aa21.62■■□□□ 1.05
HERPUD2-201ENST00000311350 CCP110O43303 1012 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms