RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 TMEM67Q5HYA8 995 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 NUTM2AQ8IVF1 878 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-201ENST00000309017 APPBP2Q92624 585 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 XAGE2Q96GT9 111 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 HSD3B7Q9H2F3 369 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 RNF216Q9NWF9 866 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-201ENST00000309017 FEZ2Q9UHY8 353 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-201ENST00000309017 NEDD4P46934 1319 aa12.73□□□□□ -0.37
PTPN7-201ENST00000309017 SOWAHDA6NJG2 315 aa12.73□□□□□ -0.37
PTPN7-201ENST00000309017 SAMSN1Q9NSI8 373 aaKnown RBP12.73□□□□□ -0.37
PTPN7-201ENST00000309017 HEG1Q9ULI3 1381 aa12.73□□□□□ -0.37
PTPN7-201ENST00000309017 CDC27P30260 824 aa12.73□□□□□ -0.37
PTPN7-201ENST00000309017 ANTXR2P58335 489 aa12.73□□□□□ -0.37
PTPN7-201ENST00000309017 FILIP1LQ4L180 1135 aa12.73□□□□□ -0.37
PTPN7-201ENST00000309017 TTLL7Q6ZT98 887 aa12.73□□□□□ -0.37
PTPN7-201ENST00000309017 RSPH14Q9UHP6 348 aa12.73□□□□□ -0.37
PTPN7-201ENST00000309017 SERTAD1Q9UHV2 236 aa12.73□□□□□ -0.37
PTPN7-201ENST00000309017 PES1O00541 588 aaKnown RBP12.73□□□□□ -0.37
PTPN7-201ENST00000309017 AFMP43652 599 aa12.73□□□□□ -0.37
PTPN7-201ENST00000309017 PDE4CQ08493 712 aa12.73□□□□□ -0.37
PTPN7-201ENST00000309017 SSRP1Q08945 709 aaKnown RBP12.73□□□□□ -0.37
PTPN7-201ENST00000309017 RESP18Q5W5W9 173 aa12.73□□□□□ -0.37
PTPN7-201ENST00000309017 MAN1B1Q9UKM7 699 aa12.73□□□□□ -0.37
PTPN7-201ENST00000309017 DENND2AQ9ULE3 1009 aa12.73□□□□□ -0.37
PTPN7-201ENST00000309017 AKAP2Q9Y2D5 859 aa12.73□□□□□ -0.37
PTPN7-201ENST00000309017 CCDC151A5D8V7 595 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 IGSF22Q8N9C0 903 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 TC2NQ8N9U0 490 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 SLC12A7Q9Y666 1083 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 UBR1Q8IWV7 1749 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 ZMYM6O95789 1325 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 IFIT3O14879 490 aaKnown RBP12.72□□□□□ -0.37
PTPN7-201ENST00000309017 PHKG2P15735 406 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 FOXO4P98177 505 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 SLC9C2Q5TAH2 1124 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 HDXQ7Z353 690 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 FOXP4Q8IVH2 680 aaPredicted RBP12.72□□□□□ -0.37
PTPN7-201ENST00000309017 TRIM22Q8IYM9 498 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 CEP112Q8N8E3 955 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 FUT8Q9BYC5 575 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 TRIM66O15016 1216 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 FMR1Q06787 632 aaKnown RBP eCLIP12.72□□□□□ -0.37
PTPN7-201ENST00000309017 BRD3Q15059 726 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 MLKLQ8NB16 471 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 MRPL44Q9H9J2 332 aaKnown RBP12.72□□□□□ -0.37
PTPN7-201ENST00000309017 INTS13Q9NVM9 706 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 KCNJ14Q9UNX9 436 aa12.72□□□□□ -0.37
PTPN7-201ENST00000309017 BTBD18B2RXH4 712 aa12.71□□□□□ -0.37
PTPN7-201ENST00000309017 MYO1BO43795 1136 aa12.71□□□□□ -0.37
PTPN7-201ENST00000309017 WWC2Q6AWC2 1192 aa12.71□□□□□ -0.37
PTPN7-201ENST00000309017 SRGAP1Q7Z6B7 1085 aa12.71□□□□□ -0.37
PTPN7-201ENST00000309017 GOLGA5Q8TBA6 731 aa12.71□□□□□ -0.37
PTPN7-201ENST00000309017 GPR108Q9NPR9 543 aa12.71□□□□□ -0.37
PTPN7-201ENST00000309017 KDM3BQ7LBC6 1761 aa12.71□□□□□ -0.37
PTPN7-201ENST00000309017 CTAGE9A4FU28 777 aa12.71□□□□□ -0.37
PTPN7-201ENST00000309017 MYO1CO00159 1063 aa12.71□□□□□ -0.37
PTPN7-201ENST00000309017 TULP2O00295 520 aa12.71□□□□□ -0.37
PTPN7-201ENST00000309017 NOM1Q5C9Z4 860 aaKnown RBP12.71□□□□□ -0.37
PTPN7-201ENST00000309017 METTL24Q5JXM2 366 aa12.71□□□□□ -0.37
PTPN7-201ENST00000309017 APOA5Q6Q788 366 aa12.71□□□□□ -0.37
PTPN7-201ENST00000309017 NUP133Q8WUM0 1156 aa12.71□□□□□ -0.37
PTPN7-201ENST00000309017 EXOC4Q96A65 974 aa12.71□□□□□ -0.37
PTPN7-201ENST00000309017 HPSEQ9Y251 543 aa12.71□□□□□ -0.37
PTPN7-201ENST00000309017 PRR29P0C7W0 189 aa12.71□□□□□ -0.38
PTPN7-201ENST00000309017 SCARF1Q14162 830 aa12.71□□□□□ -0.38
PTPN7-201ENST00000309017 MED1Q15648 1581 aaPredicted RBP12.71□□□□□ -0.38
PTPN7-201ENST00000309017 A0A0G2JS52 829 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 UBE2Q2LH0YL09 131 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 POTEB2H3BUK9 544 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 AKAP17AQ02040 695 aaKnown RBP12.7□□□□□ -0.38
PTPN7-201ENST00000309017 DIS3L2Q8IYB7 885 aaKnown RBP12.7□□□□□ -0.38
PTPN7-201ENST00000309017 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.7□□□□□ -0.38
PTPN7-201ENST00000309017 ACBD3Q9H3P7 528 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 CTAGE15A4D2H0 777 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 H3BQF6 201 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 CTAGE8P0CG41 777 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 PTPAQ15257 358 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 RSRC2Q7L4I2 434 aaKnown RBP12.7□□□□□ -0.38
PTPN7-201ENST00000309017 CTAGE6Q86UF2 777 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 TMEM139Q8IV31 216 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 CTAGE4Q8IX94 777 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 AIDAQ96BJ3 306 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 H7C1W4 665 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 A1BGP04217 495 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 ACTN2P35609 894 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 TBC1D2BQ9UPU7 963 aa12.7□□□□□ -0.38
PTPN7-201ENST00000309017 MUM1L1Q5H9M0 696 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 CYB5R4Q7L1T6 521 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 WASF1Q92558 559 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 SENP2Q9HC62 589 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 CDC23Q9UJX2 597 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 FAN1Q9Y2M0 1017 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 TEX33O43247 280 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 BMP6P22004 513 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 CCT6AP40227 531 aaKnown RBP12.69□□□□□ -0.38
PTPN7-201ENST00000309017 RBL2Q08999 1139 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 NOSTRINQ8IVI9 506 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 SUGCTQ9HAC7 445 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 CNNM1Q9NRU3 951 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 RRP15Q9Y3B9 282 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms