RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 RPAP2Q8IXW5 612 aaPredicted RBP24.35■■□□□ 1.49
PDZRN3-202ENST00000308537 CSADQ9Y600 493 aa24.35■■□□□ 1.49
PDZRN3-202ENST00000308537 FOCADQ5VW36 1801 aa24.35■■□□□ 1.49
PDZRN3-202ENST00000308537 PHF20L1A8MW92 1017 aa24.34■■□□□ 1.49
PDZRN3-202ENST00000308537 NPM3O75607 178 aaKnown RBP24.34■■□□□ 1.49
PDZRN3-202ENST00000308537 CCDC158Q5M9N0 1113 aa24.34■■□□□ 1.49
PDZRN3-202ENST00000308537 ADGRA1Q86SQ6 560 aa24.34■■□□□ 1.49
PDZRN3-202ENST00000308537 ERO1BQ86YB8 467 aa24.34■■□□□ 1.49
PDZRN3-202ENST00000308537 OTUD5Q96G74 571 aa24.34■■□□□ 1.49
PDZRN3-202ENST00000308537 ZAP70P43403 619 aa24.33■■□□□ 1.49
PDZRN3-202ENST00000308537 CTU1Q7Z7A3 348 aaKnown RBP24.33■■□□□ 1.49
PDZRN3-202ENST00000308537 RHPN1Q8TCX5 695 aa24.33■■□□□ 1.49
PDZRN3-202ENST00000308537 PIH1D3Q9NQM4 214 aaKnown RBP24.33■■□□□ 1.49
PDZRN3-202ENST00000308537 RAI14Q9P0K7 980 aa24.33■■□□□ 1.49
PDZRN3-202ENST00000308537 PHIPQ8WWQ0 1821 aa24.33■■□□□ 1.48
PDZRN3-202ENST00000308537 COL2A1P02458 1487 aaPredicted RBP24.32■■□□□ 1.48
PDZRN3-202ENST00000308537 IRF6O14896 467 aa24.32■■□□□ 1.48
PDZRN3-202ENST00000308537 CRHR2Q13324 411 aa24.32■■□□□ 1.48
PDZRN3-202ENST00000308537 NOL9Q5SY16 702 aaKnown RBP24.32■■□□□ 1.48
PDZRN3-202ENST00000308537 CAP1Q01518 475 aa24.31■■□□□ 1.48
PDZRN3-202ENST00000308537 PPIL2Q13356 520 aa24.31■■□□□ 1.48
PDZRN3-202ENST00000308537 ERC1Q8IUD2 1116 aa24.31■■□□□ 1.48
PDZRN3-202ENST00000308537 FAM43AQ8N2R8 423 aa24.31■■□□□ 1.48
PDZRN3-202ENST00000308537 IL1RAPL2Q9NP60 686 aa24.31■■□□□ 1.48
PDZRN3-202ENST00000308537 LRP2BPQ9P2M1 347 aa24.31■■□□□ 1.48
PDZRN3-202ENST00000308537 PTPRFP10586 1907 aa24.31■■□□□ 1.48
PDZRN3-202ENST00000308537 CCL15-CCL14A0A0B4J2E2 113 aa24.3■■□□□ 1.48
PDZRN3-202ENST00000308537 LDHCP07864 332 aa24.3■■□□□ 1.48
PDZRN3-202ENST00000308537 GTF2A2P52657 109 aa24.3■■□□□ 1.48
PDZRN3-202ENST00000308537 GSTO1P78417 241 aa24.3■■□□□ 1.48
PDZRN3-202ENST00000308537 CCL15Q16663 113 aa24.3■■□□□ 1.48
PDZRN3-202ENST00000308537 NDUFB9Q9Y6M9 179 aa24.3■■□□□ 1.48
PDZRN3-202ENST00000308537 DOCK1Q14185 1865 aa24.3■■□□□ 1.48
PDZRN3-202ENST00000308537 FKTNO75072 461 aa24.29■■□□□ 1.48
PDZRN3-202ENST00000308537 MAP4K4O95819 1239 aaPredicted RBP24.29■■□□□ 1.48
PDZRN3-202ENST00000308537 PPP4CP60510 307 aa24.29■■□□□ 1.48
PDZRN3-202ENST00000308537 PPATQ06203 517 aa24.29■■□□□ 1.48
PDZRN3-202ENST00000308537 PICALMQ13492 652 aa24.29■■□□□ 1.48
PDZRN3-202ENST00000308537 MOGSQ13724 837 aa24.29■■□□□ 1.48
PDZRN3-202ENST00000308537 AACSQ86V21 672 aa24.29■■□□□ 1.48
PDZRN3-202ENST00000308537 KCNH4Q9UQ05 1017 aa24.29■■□□□ 1.48
PDZRN3-202ENST00000308537 ANTXR1Q9H6X2 564 aa24.28■■□□□ 1.48
PDZRN3-202ENST00000308537 IGSF3O75054 1194 aa24.27■■□□□ 1.48
PDZRN3-202ENST00000308537 HSP90AB4PQ58FF6 505 aa24.27■■□□□ 1.48
PDZRN3-202ENST00000308537 NAA16Q6N069 864 aaPredicted RBP24.27■■□□□ 1.48
PDZRN3-202ENST00000308537 SH3RF3Q8TEJ3 882 aaPredicted RBP24.27■■□□□ 1.48
PDZRN3-202ENST00000308537 KIF1BPQ96EK5 621 aa24.26■■□□□ 1.47
PDZRN3-202ENST00000308537 OSBPL5Q9H0X9 879 aaPredicted RBP24.26■■□□□ 1.47
PDZRN3-202ENST00000308537 AATFQ9NY61 560 aaKnown RBP eCLIP24.26■■□□□ 1.47
PDZRN3-202ENST00000308537 CCDC85CA6NKD9 419 aa24.25■■□□□ 1.47
PDZRN3-202ENST00000308537 BTBD19C9JJ37 291 aa24.25■■□□□ 1.47
PDZRN3-202ENST00000308537 TBC1D12O60347 775 aa24.25■■□□□ 1.47
PDZRN3-202ENST00000308537 HMMRO75330 724 aa24.25■■□□□ 1.47
PDZRN3-202ENST00000308537 OTUD7BQ6GQQ9 843 aa24.25■■□□□ 1.47
PDZRN3-202ENST00000308537 CENPFP49454 3210 aa24.24■■□□□ 1.47
PDZRN3-202ENST00000308537 ATAD5Q96QE3 1844 aa24.24■■□□□ 1.47
PDZRN3-202ENST00000308537 CETPP11597 493 aa24.24■■□□□ 1.47
PDZRN3-202ENST00000308537 SNAPC2Q13487 334 aa24.24■■□□□ 1.47
PDZRN3-202ENST00000308537 TEX11Q8IYF3 940 aa24.24■■□□□ 1.47
PDZRN3-202ENST00000308537 SCYL3Q8IZE3 742 aa24.24■■□□□ 1.47
PDZRN3-202ENST00000308537 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.24■■□□□ 1.47
PDZRN3-202ENST00000308537 ZSWIM8A7E2V4 1837 aa24.24■■□□□ 1.47
PDZRN3-202ENST00000308537 RGS19P49795 217 aa24.23■■□□□ 1.47
PDZRN3-202ENST00000308537 RRP1BQ14684 758 aaKnown RBP24.23■■□□□ 1.47
PDZRN3-202ENST00000308537 ZSCAN29Q8IWY8 852 aaPredicted RBP24.23■■□□□ 1.47
PDZRN3-202ENST00000308537 CHMP4BQ9H444 224 aaKnown RBP24.23■■□□□ 1.47
PDZRN3-202ENST00000308537 ZCCHC17Q9NP64 241 aaKnown RBP24.23■■□□□ 1.47
PDZRN3-202ENST00000308537 FAM196BA6NMK8 535 aa24.22■■□□□ 1.47
PDZRN3-202ENST00000308537 RAB11FIP3O75154 756 aa24.22■■□□□ 1.47
PDZRN3-202ENST00000308537 PKN2Q16513 984 aaKnown RBP24.22■■□□□ 1.47
PDZRN3-202ENST00000308537 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.22■■□□□ 1.47
PDZRN3-202ENST00000308537 HPS5Q9UPZ3 1129 aa24.22■■□□□ 1.47
PDZRN3-202ENST00000308537 DDX60LQ5H9U9 1706 aaKnown RBP24.21■■□□□ 1.47
PDZRN3-202ENST00000308537 FLT1P17948 1338 aa24.21■■□□□ 1.47
PDZRN3-202ENST00000308537 ADGRA2Q96PE1 1338 aa24.21■■□□□ 1.47
PDZRN3-202ENST00000308537 APBB1O00213 710 aa24.21■■□□□ 1.47
PDZRN3-202ENST00000308537 PTPRAP18433 802 aa24.21■■□□□ 1.47
PDZRN3-202ENST00000308537 DYNLL1P63167 89 aaKnown RBP24.21■■□□□ 1.47
PDZRN3-202ENST00000308537 TAF1CQ15572 869 aaPredicted RBP24.21■■□□□ 1.47
PDZRN3-202ENST00000308537 OTOP1Q7RTM1 612 aa24.21■■□□□ 1.47
PDZRN3-202ENST00000308537 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.21■■□□□ 1.47
PDZRN3-202ENST00000308537 CTNND1O60716 968 aaKnown RBP24.2■■□□□ 1.46
PDZRN3-202ENST00000308537 METTL16Q86W50 562 aaKnown RBP24.2■■□□□ 1.46
PDZRN3-202ENST00000308537 CLASRPQ8N2M8 674 aaKnown RBP24.2■■□□□ 1.46
PDZRN3-202ENST00000308537 DNAJC18Q9H819 358 aa24.2■■□□□ 1.46
PDZRN3-202ENST00000308537 AFG3L2Q9Y4W6 797 aa24.2■■□□□ 1.46
PDZRN3-202ENST00000308537 MYH1P12882 1939 aa24.2■■□□□ 1.46
PDZRN3-202ENST00000308537 IDH1O75874 414 aaKnown RBP24.19■■□□□ 1.46
PDZRN3-202ENST00000308537 BAG3O95817 575 aa24.19■■□□□ 1.46
PDZRN3-202ENST00000308537 CYP7A1P22680 504 aa24.19■■□□□ 1.46
PDZRN3-202ENST00000308537 GPAT2Q6NUI2 795 aa24.19■■□□□ 1.46
PDZRN3-202ENST00000308537 FBXO46Q6PJ61 603 aaPredicted RBP24.19■■□□□ 1.46
PDZRN3-202ENST00000308537 CD99L2Q8TCZ2 262 aa24.19■■□□□ 1.46
PDZRN3-202ENST00000308537 TGFBRAP1Q8WUH2 860 aa24.19■■□□□ 1.46
PDZRN3-202ENST00000308537 BRCA2P51587 3418 aa24.19■■□□□ 1.46
PDZRN3-202ENST00000308537 CXCL11O14625 94 aa24.18■■□□□ 1.46
PDZRN3-202ENST00000308537 TLR2O60603 784 aa24.18■■□□□ 1.46
PDZRN3-202ENST00000308537 PLCG2P16885 1265 aa24.18■■□□□ 1.46
PDZRN3-202ENST00000308537 SP3Q02447 781 aa24.18■■□□□ 1.46
PDZRN3-202ENST00000308537 ANKRD23Q86SG2 305 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms