RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 HPSEQ9Y251 543 aa19.08■□□□□ 0.64
SSH3-201ENST00000308127 KIF2AO00139 706 aaPredicted RBP19.07■□□□□ 0.64
SSH3-201ENST00000308127 IFIT3O14879 490 aaKnown RBP19.07■□□□□ 0.64
SSH3-201ENST00000308127 ADD2P35612 726 aa19.07■□□□□ 0.64
SSH3-201ENST00000308127 STX17P56962 302 aa19.07■□□□□ 0.64
SSH3-201ENST00000308127 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.07■□□□□ 0.64
SSH3-201ENST00000308127 SAMSN1Q9NSI8 373 aaKnown RBP19.07■□□□□ 0.64
SSH3-201ENST00000308127 SERTAD1Q9UHV2 236 aa19.07■□□□□ 0.64
SSH3-201ENST00000308127 VWA3AA6NCI4 1184 aa19.07■□□□□ 0.64
SSH3-201ENST00000308127 CCDC102BQ68D86 513 aa19.07■□□□□ 0.64
SSH3-201ENST00000308127 KRBA2Q6ZNG9 492 aa19.07■□□□□ 0.64
SSH3-201ENST00000308127 ARMT1Q9H993 441 aa19.07■□□□□ 0.64
SSH3-201ENST00000308127 IQSEC3Q9UPP2 1182 aaPredicted RBP19.07■□□□□ 0.64
SSH3-201ENST00000308127 NFE2L3Q9Y4A8 694 aa19.07■□□□□ 0.64
SSH3-201ENST00000308127 FAM205CA6NFA0 338 aa19.07■□□□□ 0.64
SSH3-201ENST00000308127 TFRCP02786 760 aaKnown RBP19.07■□□□□ 0.64
SSH3-201ENST00000308127 PLA2G4AP47712 749 aa19.07■□□□□ 0.64
SSH3-201ENST00000308127 MAPK8IP2Q13387 824 aaPredicted RBP19.07■□□□□ 0.64
SSH3-201ENST00000308127 RESP18Q5W5W9 173 aa19.07■□□□□ 0.64
SSH3-201ENST00000308127 NUP133Q8WUM0 1156 aa19.07■□□□□ 0.64
SSH3-201ENST00000308127 ZSWIM5Q9P217 1185 aa19.07■□□□□ 0.64
SSH3-201ENST00000308127 PPP2R2CQ9Y2T4 447 aa19.07■□□□□ 0.64
SSH3-201ENST00000308127 CPDO75976 1380 aa19.06■□□□□ 0.64
SSH3-201ENST00000308127 IKBKBO14920 756 aa19.06■□□□□ 0.64
SSH3-201ENST00000308127 GYS2P54840 703 aa19.06■□□□□ 0.64
SSH3-201ENST00000308127 OXER1Q8TDS5 423 aa19.06■□□□□ 0.64
SSH3-201ENST00000308127 AIDAQ96BJ3 306 aa19.06■□□□□ 0.64
SSH3-201ENST00000308127 NOL10Q9BSC4 688 aaKnown RBP19.06■□□□□ 0.64
SSH3-201ENST00000308127 ISCA1Q9BUE6 129 aa19.06■□□□□ 0.64
SSH3-201ENST00000308127 A0A0G2JS52 829 aa19.06■□□□□ 0.64
SSH3-201ENST00000308127 PDE6AP16499 860 aa19.06■□□□□ 0.64
SSH3-201ENST00000308127 NTRK3Q16288 839 aa19.06■□□□□ 0.64
SSH3-201ENST00000308127 LRRFIP1Q32MZ4 808 aaKnown RBP19.06■□□□□ 0.64
SSH3-201ENST00000308127 LY9Q9HBG7 655 aa19.06■□□□□ 0.64
SSH3-201ENST00000308127 PCDHB6Q9Y5E3 794 aa19.06■□□□□ 0.64
SSH3-201ENST00000308127 PARP3Q9Y6F1 533 aa19.06■□□□□ 0.64
SSH3-201ENST00000308127 CAMTA1Q9Y6Y1 1673 aa19.06■□□□□ 0.64
SSH3-201ENST00000308127 SMYD4Q8IYR2 804 aaPredicted RBP19.05■□□□□ 0.64
SSH3-201ENST00000308127 STAMQ92783 540 aa19.05■□□□□ 0.64
SSH3-201ENST00000308127 CHMP4CQ96CF2 233 aa19.05■□□□□ 0.64
SSH3-201ENST00000308127 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.05■□□□□ 0.64
SSH3-201ENST00000308127 EPB41L4AQ9HCS5 686 aaPredicted RBP19.05■□□□□ 0.64
SSH3-201ENST00000308127 TRPM3Q9HCF6 1732 aaPredicted RBP19.05■□□□□ 0.64
SSH3-201ENST00000308127 MBD4O95243 580 aa19.05■□□□□ 0.64
SSH3-201ENST00000308127 TOB1P50616 345 aaPredicted RBP19.05■□□□□ 0.64
SSH3-201ENST00000308127 DIS3L2Q8IYB7 885 aaKnown RBP19.05■□□□□ 0.64
SSH3-201ENST00000308127 MIGA1Q8NAN2 632 aa19.05■□□□□ 0.64
SSH3-201ENST00000308127 IGDCC4Q8TDY8 1250 aa19.05■□□□□ 0.64
SSH3-201ENST00000308127 MAN1B1Q9UKM7 699 aa19.05■□□□□ 0.64
SSH3-201ENST00000308127 SLC12A7Q9Y666 1083 aa19.05■□□□□ 0.64
SSH3-201ENST00000308127 BMS1Q14692 1282 aaKnown RBP19.04■□□□□ 0.64
SSH3-201ENST00000308127 CPLX2Q6PUV4 134 aaKnown RBP19.04■□□□□ 0.64
SSH3-201ENST00000308127 CREBRFQ8IUR6 639 aa19.04■□□□□ 0.64
SSH3-201ENST00000308127 TMEM139Q8IV31 216 aa19.04■□□□□ 0.64
SSH3-201ENST00000308127 FBXL16Q8N461 479 aa19.04■□□□□ 0.64
SSH3-201ENST00000308127 MAGEB6Q8N7X4 407 aa19.04■□□□□ 0.64
SSH3-201ENST00000308127 LZTFL1Q9NQ48 299 aa19.04■□□□□ 0.64
SSH3-201ENST00000308127 AFMP43652 599 aa19.04■□□□□ 0.64
SSH3-201ENST00000308127 TMCO3Q6UWJ1 677 aa19.04■□□□□ 0.64
SSH3-201ENST00000308127 JMYQ8N9B5 988 aa19.04■□□□□ 0.64
SSH3-201ENST00000308127 MED15Q96RN5 788 aa19.04■□□□□ 0.64
SSH3-201ENST00000308127 BAG1Q99933 345 aaPredicted RBP19.04■□□□□ 0.64
SSH3-201ENST00000308127 KCND1Q9NSA2 647 aa19.04■□□□□ 0.64
SSH3-201ENST00000308127 RIPOR2Q9Y4F9 1068 aa19.04■□□□□ 0.64
SSH3-201ENST00000308127 MYO5AQ9Y4I1 1855 aaKnown RBP19.04■□□□□ 0.64
SSH3-201ENST00000308127 TTLL11Q8NHH1 800 aa19.03■□□□□ 0.64
SSH3-201ENST00000308127 TJP1Q07157 1748 aa19.03■□□□□ 0.64
SSH3-201ENST00000308127 TADA3O75528 432 aa19.03■□□□□ 0.64
SSH3-201ENST00000308127 NEK11Q8NG66 645 aa19.03■□□□□ 0.64
SSH3-201ENST00000308127 FAM53CQ9NYF3 392 aa19.03■□□□□ 0.64
SSH3-201ENST00000308127 RIC1Q4ADV7 1423 aa19.03■□□□□ 0.64
SSH3-201ENST00000308127 TEX33O43247 280 aa19.03■□□□□ 0.64
SSH3-201ENST00000308127 SASH3O75995 380 aa19.03■□□□□ 0.64
SSH3-201ENST00000308127 SSRP1Q08945 709 aaKnown RBP19.03■□□□□ 0.64
SSH3-201ENST00000308127 KIF6Q6ZMV9 814 aa19.03■□□□□ 0.64
SSH3-201ENST00000308127 KRI1Q8N9T8 703 aaKnown RBP19.03■□□□□ 0.64
SSH3-201ENST00000308127 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.03■□□□□ 0.64
SSH3-201ENST00000308127 NAPBQ9H115 298 aa19.03■□□□□ 0.64
SSH3-201ENST00000308127 TBC1D2BQ9UPU7 963 aa19.03■□□□□ 0.64
SSH3-201ENST00000308127 GLI3P10071 1580 aa19.02■□□□□ 0.64
SSH3-201ENST00000308127 CBFA2T2O43439 604 aa19.02■□□□□ 0.64
SSH3-201ENST00000308127 PPP6R2O75170 966 aa19.02■□□□□ 0.64
SSH3-201ENST00000308127 BAZ2BQ9UIF8 2168 aaKnown RBP19.02■□□□□ 0.64
SSH3-201ENST00000308127 SOWAHDA6NJG2 315 aa19.02■□□□□ 0.63
SSH3-201ENST00000308127 CDKL5O76039 1030 aa19.02■□□□□ 0.63
SSH3-201ENST00000308127 POSTNQ15063 836 aa19.02■□□□□ 0.63
SSH3-201ENST00000308127 NOSTRINQ8IVI9 506 aa19.02■□□□□ 0.63
SSH3-201ENST00000308127 PCDH11XQ9BZA7 1347 aa19.02■□□□□ 0.63
SSH3-201ENST00000308127 PCDH11YQ9BZA8 1340 aa19.02■□□□□ 0.63
SSH3-201ENST00000308127 PRDM1O75626 825 aa19.01■□□□□ 0.63
SSH3-201ENST00000308127 TC2NQ8N9U0 490 aa19.01■□□□□ 0.63
SSH3-201ENST00000308127 DHX58Q96C10 678 aa19.01■□□□□ 0.63
SSH3-201ENST00000308127 MRPL44Q9H9J2 332 aaKnown RBP19.01■□□□□ 0.63
SSH3-201ENST00000308127 CABP5Q9NP86 173 aa19.01■□□□□ 0.63
SSH3-201ENST00000308127 ATG3Q9NT62 314 aa19.01■□□□□ 0.63
SSH3-201ENST00000308127 TRMT112Q9UI30 125 aaKnown RBP19.01■□□□□ 0.63
SSH3-201ENST00000308127 TMEM94Q12767 1356 aa19.01■□□□□ 0.63
SSH3-201ENST00000308127 CUTAO60888 179 aa19.01■□□□□ 0.63
SSH3-201ENST00000308127 CASQ1P31415 396 aa19.01■□□□□ 0.63
SSH3-201ENST00000308127 TIGD1Q96MW7 591 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms