RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 CNNM3Q8NE01 707 aa18.59■□□□□ 0.57
CCDC8-201ENST00000307522 RIN2Q8WYP3 895 aaPredicted RBP18.59■□□□□ 0.57
CCDC8-201ENST00000307522 ADD1P35611 737 aaKnown RBP18.59■□□□□ 0.57
CCDC8-201ENST00000307522 UBASH3AP57075 661 aa18.59■□□□□ 0.57
CCDC8-201ENST00000307522 FAM160A1Q05DH4 1040 aa18.59■□□□□ 0.57
CCDC8-201ENST00000307522 GPHNQ9NQX3 736 aaPredicted RBP18.59■□□□□ 0.57
CCDC8-201ENST00000307522 JAG2Q9Y219 1238 aa18.59■□□□□ 0.57
CCDC8-201ENST00000307522 COL15A1P39059 1388 aa18.58■□□□□ 0.57
CCDC8-201ENST00000307522 FBXW10Q5XX13 1052 aa18.58■□□□□ 0.57
CCDC8-201ENST00000307522 LRRC31Q6UY01 552 aa18.58■□□□□ 0.57
CCDC8-201ENST00000307522 GPR161Q8N6U8 529 aaKnown RBP18.58■□□□□ 0.57
CCDC8-201ENST00000307522 ABCB6Q9NP58 842 aa18.58■□□□□ 0.57
CCDC8-201ENST00000307522 PCDHA7Q9UN72 937 aa18.58■□□□□ 0.57
CCDC8-201ENST00000307522 SCN11AQ9UI33 1791 aa18.58■□□□□ 0.57
CCDC8-201ENST00000307522 PHLPP2Q6ZVD8 1323 aa18.58■□□□□ 0.56
CCDC8-201ENST00000307522 CACNA1FO60840 1977 aa18.58■□□□□ 0.56
CCDC8-201ENST00000307522 SCRN1Q12765 414 aa18.58■□□□□ 0.56
CCDC8-201ENST00000307522 RABL6Q3YEC7 729 aaPredicted RBP18.58■□□□□ 0.56
CCDC8-201ENST00000307522 NLRP10Q86W26 655 aa18.58■□□□□ 0.56
CCDC8-201ENST00000307522 ECM2O94769 699 aaPredicted RBP18.57■□□□□ 0.56
CCDC8-201ENST00000307522 MNAT1P51948 309 aa18.57■□□□□ 0.56
CCDC8-201ENST00000307522 TTC39AQ5SRH9 613 aa18.57■□□□□ 0.56
CCDC8-201ENST00000307522 XAGE2Q96GT9 111 aa18.57■□□□□ 0.56
CCDC8-201ENST00000307522 PAG1Q9NWQ8 432 aa18.57■□□□□ 0.56
CCDC8-201ENST00000307522 ZAP70P43403 619 aa18.57■□□□□ 0.56
CCDC8-201ENST00000307522 CRKLP46109 303 aaKnown RBP18.57■□□□□ 0.56
CCDC8-201ENST00000307522 TTC19Q6DKK2 380 aaPredicted RBP18.57■□□□□ 0.56
CCDC8-201ENST00000307522 IDH1O75874 414 aaKnown RBP18.56■□□□□ 0.56
CCDC8-201ENST00000307522 PSMA5P28066 241 aa18.56■□□□□ 0.56
CCDC8-201ENST00000307522 CTR9Q6PD62 1173 aa18.56■□□□□ 0.56
CCDC8-201ENST00000307522 ENGASEQ8NFI3 743 aa18.56■□□□□ 0.56
CCDC8-201ENST00000307522 CLIC6Q96NY7 704 aa18.56■□□□□ 0.56
CCDC8-201ENST00000307522 EHD4Q9H223 541 aa18.56■□□□□ 0.56
CCDC8-201ENST00000307522 UBN2Q6ZU65 1347 aa18.56■□□□□ 0.56
CCDC8-201ENST00000307522 CAVIN2O95810 425 aa18.56■□□□□ 0.56
CCDC8-201ENST00000307522 CPLX3Q8WVH0 158 aa18.56■□□□□ 0.56
CCDC8-201ENST00000307522 FAM204AQ9H8W3 233 aa18.56■□□□□ 0.56
CCDC8-201ENST00000307522 POLD4Q9HCU8 107 aa18.56■□□□□ 0.56
CCDC8-201ENST00000307522 LOC102724428A0A0B4J2F2 783 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 WDHD1O75717 1129 aaPredicted RBP18.55■□□□□ 0.56
CCDC8-201ENST00000307522 MARCKSP29966 332 aaPredicted RBP18.55■□□□□ 0.56
CCDC8-201ENST00000307522 SIK1P57059 783 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 SUSD4Q5VX71 490 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 GOLGA1Q92805 767 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 TM6SF1Q9BZW5 370 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 DENND2AQ9ULE3 1009 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 TOP1P11387 765 aaKnown RBP18.55■□□□□ 0.56
CCDC8-201ENST00000307522 AOX1Q06278 1338 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 MAP3K15Q6ZN16 1313 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.55■□□□□ 0.56
CCDC8-201ENST00000307522 KAT2BQ92831 832 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 MAP4K1Q92918 833 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 CXorf56Q9H5V9 222 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 FANCLQ9NW38 375 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 IMPACTQ9P2X3 320 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 NIP7Q9Y221 180 aaKnown RBP eCLIP18.55■□□□□ 0.56
CCDC8-201ENST00000307522 MRFAP1Q9Y605 127 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 CLIC4Q9Y696 253 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 JAKMIP3Q5VZ66 844 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 GIGYF2Q6Y7W6 1299 aaKnown RBP18.55■□□□□ 0.56
CCDC8-201ENST00000307522 ISCA1Q9BUE6 129 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 INCENPQ9NQS7 918 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 KIAA1468Q9P260 1216 aa18.55■□□□□ 0.56
CCDC8-201ENST00000307522 TUBGCP6Q96RT7 1819 aa18.54■□□□□ 0.56
CCDC8-201ENST00000307522 CTAGE5O15320 804 aa18.54■□□□□ 0.56
CCDC8-201ENST00000307522 ATP5JP18859 108 aa18.54■□□□□ 0.56
CCDC8-201ENST00000307522 CHMP4BP1P59074 171 aa18.54■□□□□ 0.56
CCDC8-201ENST00000307522 NCAPHQ15003 741 aa18.54■□□□□ 0.56
CCDC8-201ENST00000307522 TTLL11Q8NHH1 800 aa18.54■□□□□ 0.56
CCDC8-201ENST00000307522 IVLP07476 585 aa18.53■□□□□ 0.56
CCDC8-201ENST00000307522 SLC3A2P08195 630 aaKnown RBP18.53■□□□□ 0.56
CCDC8-201ENST00000307522 TXLNAP40222 546 aa18.53■□□□□ 0.56
CCDC8-201ENST00000307522 MAP3K9P80192 1104 aa18.53■□□□□ 0.56
CCDC8-201ENST00000307522 MRPS27Q92552 414 aaKnown RBP18.53■□□□□ 0.56
CCDC8-201ENST00000307522 PTPDC1A2A3K4 754 aa18.53■□□□□ 0.56
CCDC8-201ENST00000307522 ZMYND10O75800 440 aa18.53■□□□□ 0.56
CCDC8-201ENST00000307522 IL15P40933 162 aaPredicted RBP18.53■□□□□ 0.56
CCDC8-201ENST00000307522 SLC4A8Q2Y0W8 1093 aa18.53■□□□□ 0.56
CCDC8-201ENST00000307522 LONRF3Q496Y0 759 aa18.53■□□□□ 0.56
CCDC8-201ENST00000307522 RSRC2Q7L4I2 434 aaKnown RBP18.53■□□□□ 0.56
CCDC8-201ENST00000307522 PPM1EQ8WY54 764 aa18.53■□□□□ 0.56
CCDC8-201ENST00000307522 MRPL44Q9H9J2 332 aaKnown RBP18.53■□□□□ 0.56
CCDC8-201ENST00000307522 CYP21A2P08686 494 aa18.53■□□□□ 0.56
CCDC8-201ENST00000307522 VSNL1P62760 191 aa18.53■□□□□ 0.56
CCDC8-201ENST00000307522 ANKZF1Q9H8Y5 726 aa18.53■□□□□ 0.56
CCDC8-201ENST00000307522 SRP68Q9UHB9 627 aaKnown RBP18.53■□□□□ 0.56
CCDC8-201ENST00000307522 M0R2C6 588 aa18.52■□□□□ 0.56
CCDC8-201ENST00000307522 STK38Q15208 465 aa18.52■□□□□ 0.56
CCDC8-201ENST00000307522 ILDR1Q86SU0 546 aaPredicted RBP18.52■□□□□ 0.56
CCDC8-201ENST00000307522 FMR1NBQ8N0W7 255 aaPredicted RBP18.52■□□□□ 0.56
CCDC8-201ENST00000307522 RCOR1Q9UKL0 485 aa18.52■□□□□ 0.56
CCDC8-201ENST00000307522 ZNF609O15014 1411 aa18.52■□□□□ 0.56
CCDC8-201ENST00000307522 CORO7P57737 925 aa18.52■□□□□ 0.55
CCDC8-201ENST00000307522 ZBTB38Q8NAP3 1195 aaPredicted RBP18.52■□□□□ 0.55
CCDC8-201ENST00000307522 ZSCAN16Q9H4T2 348 aaPredicted RBP18.52■□□□□ 0.55
CCDC8-201ENST00000307522 PHKA1P46020 1223 aa18.51■□□□□ 0.55
CCDC8-201ENST00000307522 HSP90B2PQ58FF3 399 aa18.51■□□□□ 0.55
CCDC8-201ENST00000307522 BEND6Q5SZJ8 279 aaPredicted RBP18.51■□□□□ 0.55
CCDC8-201ENST00000307522 OSBP2Q969R2 916 aa18.51■□□□□ 0.55
CCDC8-201ENST00000307522 SPATA31A1Q5TZJ5 1347 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms