RNA–Protein interactions for RNA: ENST00000301323.7

RECQL4-201, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-201ENST00000301323 PTPN18Q99952 460 aa20.14■□□□□ 0.81
RECQL4-201ENST00000301323 ZNF112Q9UJU3 913 aa20.14■□□□□ 0.81
RECQL4-201ENST00000301323 FOCADQ5VW36 1801 aa20.13■□□□□ 0.81
RECQL4-201ENST00000301323 GPR25O00155 361 aa20.13■□□□□ 0.81
RECQL4-201ENST00000301323 HSP90AB4PQ58FF6 505 aa20.13■□□□□ 0.81
RECQL4-201ENST00000301323 AACSQ86V21 672 aa20.13■□□□□ 0.81
RECQL4-201ENST00000301323 ERO1BQ86YB8 467 aa20.13■□□□□ 0.81
RECQL4-201ENST00000301323 RHPN1Q8TCX5 695 aa20.13■□□□□ 0.81
RECQL4-201ENST00000301323 BRI3BPQ8WY22 251 aa20.13■□□□□ 0.81
RECQL4-201ENST00000301323 LRP2BPQ9P2M1 347 aa20.13■□□□□ 0.81
RECQL4-201ENST00000301323 CDK5RAP2Q96SN8 1893 aa20.13■□□□□ 0.81
RECQL4-201ENST00000301323 HMMRO75330 724 aa20.12■□□□□ 0.81
RECQL4-201ENST00000301323 LDHCP07864 332 aa20.12■□□□□ 0.81
RECQL4-201ENST00000301323 ZAP70P43403 619 aa20.12■□□□□ 0.81
RECQL4-201ENST00000301323 CTU1Q7Z7A3 348 aaKnown RBP20.12■□□□□ 0.81
RECQL4-201ENST00000301323 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.12■□□□□ 0.81
RECQL4-201ENST00000301323 CHMP4BQ9H444 224 aaKnown RBP20.12■□□□□ 0.81
RECQL4-201ENST00000301323 PIH1D3Q9NQM4 214 aaKnown RBP20.12■□□□□ 0.81
RECQL4-201ENST00000301323 DOCK1Q14185 1865 aa20.11■□□□□ 0.81
RECQL4-201ENST00000301323 DDTLA6NHG4 134 aaPredicted RBP20.11■□□□□ 0.81
RECQL4-201ENST00000301323 NPM3O75607 178 aaKnown RBP20.11■□□□□ 0.81
RECQL4-201ENST00000301323 MAP4K4O95819 1239 aaPredicted RBP20.11■□□□□ 0.81
RECQL4-201ENST00000301323 PICALMQ13492 652 aa20.11■□□□□ 0.81
RECQL4-201ENST00000301323 NOL9Q5SY16 702 aaKnown RBP20.11■□□□□ 0.81
RECQL4-201ENST00000301323 IL1RAPL2Q9NP60 686 aa20.11■□□□□ 0.81
RECQL4-201ENST00000301323 SIPA1L1O43166 1804 aa20.11■□□□□ 0.81
RECQL4-201ENST00000301323 CCL15-CCL14A0A0B4J2E2 113 aa20.1■□□□□ 0.81
RECQL4-201ENST00000301323 IRF6O14896 467 aa20.1■□□□□ 0.81
RECQL4-201ENST00000301323 GTF2A2P52657 109 aa20.1■□□□□ 0.81
RECQL4-201ENST00000301323 MAP3K10Q02779 954 aa20.1■□□□□ 0.81
RECQL4-201ENST00000301323 PPIL2Q13356 520 aa20.1■□□□□ 0.81
RECQL4-201ENST00000301323 CCL15Q16663 113 aa20.1■□□□□ 0.81
RECQL4-201ENST00000301323 NAA16Q6N069 864 aaPredicted RBP20.1■□□□□ 0.81
RECQL4-201ENST00000301323 ADGRA1Q86SQ6 560 aa20.1■□□□□ 0.81
RECQL4-201ENST00000301323 KIF1BPQ96EK5 621 aa20.1■□□□□ 0.81
RECQL4-201ENST00000301323 PHF20L1A8MW92 1017 aa20.09■□□□□ 0.81
RECQL4-201ENST00000301323 IGSF3O75054 1194 aa20.09■□□□□ 0.81
RECQL4-201ENST00000301323 CRHR2Q13324 411 aa20.09■□□□□ 0.81
RECQL4-201ENST00000301323 NDUFB9Q9Y6M9 179 aa20.09■□□□□ 0.81
RECQL4-201ENST00000301323 FKTNO75072 461 aa20.08■□□□□ 0.81
RECQL4-201ENST00000301323 SLURP2P0DP57 97 aa20.08■□□□□ 0.81
RECQL4-201ENST00000301323 MLLT1Q03111 559 aaPredicted RBP20.08■□□□□ 0.81
RECQL4-201ENST00000301323 PPATQ06203 517 aa20.08■□□□□ 0.81
RECQL4-201ENST00000301323 OTUD7BQ6GQQ9 843 aa20.08■□□□□ 0.81
RECQL4-201ENST00000301323 ZSCAN29Q8IWY8 852 aaPredicted RBP20.08■□□□□ 0.81
RECQL4-201ENST00000301323 SH3RF3Q8TEJ3 882 aaPredicted RBP20.08■□□□□ 0.81
RECQL4-201ENST00000301323 OSBPL5Q9H0X9 879 aaPredicted RBP20.08■□□□□ 0.81
RECQL4-201ENST00000301323 APBB1O00213 710 aa20.07■□□□□ 0.8
RECQL4-201ENST00000301323 SNAPC2Q13487 334 aa20.07■□□□□ 0.8
RECQL4-201ENST00000301323 TEX11Q8IYF3 940 aa20.07■□□□□ 0.8
RECQL4-201ENST00000301323 CLASRPQ8N2M8 674 aaKnown RBP20.07■□□□□ 0.8
RECQL4-201ENST00000301323 FAM43AQ8N2R8 423 aa20.07■□□□□ 0.8
RECQL4-201ENST00000301323 PHIPQ8WWQ0 1821 aa20.06■□□□□ 0.8
RECQL4-201ENST00000301323 RAB11FIP3O75154 756 aa20.06■□□□□ 0.8
RECQL4-201ENST00000301323 CETPP11597 493 aa20.06■□□□□ 0.8
RECQL4-201ENST00000301323 PPP4CP60510 307 aa20.06■□□□□ 0.8
RECQL4-201ENST00000301323 ANTXR1Q9H6X2 564 aa20.06■□□□□ 0.8
RECQL4-201ENST00000301323 AATFQ9NY61 560 aaKnown RBP eCLIP20.06■□□□□ 0.8
RECQL4-201ENST00000301323 KCNH4Q9UQ05 1017 aa20.06■□□□□ 0.8
RECQL4-201ENST00000301323 PTPRFP10586 1907 aa20.06■□□□□ 0.8
RECQL4-201ENST00000301323 DDX60LQ5H9U9 1706 aaKnown RBP20.05■□□□□ 0.8
RECQL4-201ENST00000301323 SCYL3Q8IZE3 742 aa20.05■□□□□ 0.8
RECQL4-201ENST00000301323 NOL10Q9BSC4 688 aaKnown RBP20.05■□□□□ 0.8
RECQL4-201ENST00000301323 ATAD5Q96QE3 1844 aa20.04■□□□□ 0.8
RECQL4-201ENST00000301323 BTBD19C9JJ37 291 aa20.04■□□□□ 0.8
RECQL4-201ENST00000301323 IDH1O75874 414 aaKnown RBP20.04■□□□□ 0.8
RECQL4-201ENST00000301323 BAG3O95817 575 aa20.04■□□□□ 0.8
RECQL4-201ENST00000301323 PLCG2P16885 1265 aa20.04■□□□□ 0.8
RECQL4-201ENST00000301323 ZCCHC17Q9NP64 241 aaKnown RBP20.04■□□□□ 0.8
RECQL4-201ENST00000301323 FLT1P17948 1338 aa20.03■□□□□ 0.8
RECQL4-201ENST00000301323 FAM196BA6NMK8 535 aa20.03■□□□□ 0.8
RECQL4-201ENST00000301323 TBC1D12O60347 775 aa20.03■□□□□ 0.8
RECQL4-201ENST00000301323 RGS19P49795 217 aa20.03■□□□□ 0.8
RECQL4-201ENST00000301323 MOGSQ13724 837 aa20.03■□□□□ 0.8
RECQL4-201ENST00000301323 TAF1CQ15572 869 aaPredicted RBP20.03■□□□□ 0.8
RECQL4-201ENST00000301323 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.03■□□□□ 0.8
RECQL4-201ENST00000301323 IFIT2P09913 472 aaKnown RBP20.02■□□□□ 0.8
RECQL4-201ENST00000301323 CYP7A1P22680 504 aa20.02■□□□□ 0.8
RECQL4-201ENST00000301323 RRP1P56182 461 aaKnown RBP20.02■□□□□ 0.8
RECQL4-201ENST00000301323 PKN2Q16513 984 aaKnown RBP20.02■□□□□ 0.8
RECQL4-201ENST00000301323 MAGEB6Q8N7X4 407 aa20.02■□□□□ 0.8
RECQL4-201ENST00000301323 CTNND1O60716 968 aaKnown RBP20.01■□□□□ 0.79
RECQL4-201ENST00000301323 PTPRAP18433 802 aa20.01■□□□□ 0.79
RECQL4-201ENST00000301323 TMED8Q6PL24 325 aaPredicted RBP20.01■□□□□ 0.79
RECQL4-201ENST00000301323 HPS5Q9UPZ3 1129 aa20.01■□□□□ 0.79
RECQL4-201ENST00000301323 CENPFP49454 3210 aa20■□□□□ 0.79
RECQL4-201ENST00000301323 ZSWIM8A7E2V4 1837 aa20■□□□□ 0.79
RECQL4-201ENST00000301323 SOX10P56693 466 aa20■□□□□ 0.79
RECQL4-201ENST00000301323 DYNLL1P63167 89 aaKnown RBP20■□□□□ 0.79
RECQL4-201ENST00000301323 CAP1Q01518 475 aa20■□□□□ 0.79
RECQL4-201ENST00000301323 MAP3K12Q12852 859 aa20■□□□□ 0.79
RECQL4-201ENST00000301323 ANKRD23Q86SG2 305 aa20■□□□□ 0.79
RECQL4-201ENST00000301323 MAPKAPK5Q8IW41 473 aa20■□□□□ 0.79
RECQL4-201ENST00000301323 MIGA1Q8NAN2 632 aa20■□□□□ 0.79
RECQL4-201ENST00000301323 CD99L2Q8TCZ2 262 aa20■□□□□ 0.79
RECQL4-201ENST00000301323 TGFBRAP1Q8WUH2 860 aa20■□□□□ 0.79
RECQL4-201ENST00000301323 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20■□□□□ 0.79
RECQL4-201ENST00000301323 ZFYVE28Q9HCC9 887 aa20■□□□□ 0.79
RECQL4-201ENST00000301323 PICK1Q9NRD5 415 aa20■□□□□ 0.79
RECQL4-201ENST00000301323 FRMD4AQ9P2Q2 1039 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms