RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 GPAA1O43292 621 aa17.21■□□□□ 0.34
SHROOM4-201ENST00000289292 ACTN2P35609 894 aa17.21■□□□□ 0.34
SHROOM4-201ENST00000289292 PLCB3Q01970 1234 aa17.21■□□□□ 0.34
SHROOM4-201ENST00000289292 GOLGA8FQ08AF8 430 aa17.21■□□□□ 0.34
SHROOM4-201ENST00000289292 GOLGA8DPQ0D2H9 430 aa17.21■□□□□ 0.34
SHROOM4-201ENST00000289292 DIS3L2Q8IYB7 885 aaKnown RBP17.21■□□□□ 0.34
SHROOM4-201ENST00000289292 ZNF215Q9UL58 517 aaPredicted RBP17.21■□□□□ 0.34
SHROOM4-201ENST00000289292 TNRQ92752 1358 aa17.21■□□□□ 0.34
SHROOM4-201ENST00000289292 PEG3Q9GZU2 1588 aa17.21■□□□□ 0.34
SHROOM4-201ENST00000289292 MAST1Q9Y2H9 1570 aa17.21■□□□□ 0.34
SHROOM4-201ENST00000289292 TUBB4BP68371 445 aa17.2■□□□□ 0.34
SHROOM4-201ENST00000289292 PLVAPQ9BX97 442 aa17.2■□□□□ 0.34
SHROOM4-201ENST00000289292 CUTAO60888 179 aa17.2■□□□□ 0.34
SHROOM4-201ENST00000289292 KDM5AP29375 1690 aaKnown RBP17.2■□□□□ 0.34
SHROOM4-201ENST00000289292 PRDM1O75626 825 aa17.2■□□□□ 0.34
SHROOM4-201ENST00000289292 SV2BQ7L1I2 683 aa17.2■□□□□ 0.34
SHROOM4-201ENST00000289292 SECISBP2LQ93073 1101 aaKnown RBP17.2■□□□□ 0.34
SHROOM4-201ENST00000289292 A0A087WWV3 80 aa17.2■□□□□ 0.34
SHROOM4-201ENST00000289292 FAM212AQ96EL1 285 aa17.2■□□□□ 0.34
SHROOM4-201ENST00000289292 TBC1D7Q9P0N9 293 aa17.2■□□□□ 0.34
SHROOM4-201ENST00000289292 GOLGA6BA6NDN3 693 aa17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 CHL1O00533 1208 aa17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 DEXIO95424 95 aa17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 CLNS1AP54105 237 aaKnown RBP17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 CSGALNACT2Q8N6G5 542 aa17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 RBM28Q9NW13 759 aaKnown RBP17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 LRRC8AQ8IWT6 810 aa17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 NELFBQ8WX92 580 aa17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 SERTAD1Q9UHV2 236 aa17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 PRPHP41219 470 aa17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 KRT40Q6A162 431 aa17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 CCDC77Q9BR77 488 aa17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 RFC4P35249 363 aa17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 RILPL1Q5EBL4 403 aa17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 ANGEL1Q9UNK9 670 aaKnown RBP17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 ZNF622Q969S3 477 aaKnown RBP eCLIP17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 PKD2L1Q9P0L9 805 aa17.19■□□□□ 0.34
SHROOM4-201ENST00000289292 A0A0D9SFI3 127 aa17.18■□□□□ 0.34
SHROOM4-201ENST00000289292 E7EWF7 191 aa17.18■□□□□ 0.34
SHROOM4-201ENST00000289292 ARHGAP6O43182 974 aa17.18■□□□□ 0.34
SHROOM4-201ENST00000289292 MTMR6Q9Y217 621 aa17.18■□□□□ 0.34
SHROOM4-201ENST00000289292 YTHDC2Q9H6S0 1430 aaKnown RBP17.18■□□□□ 0.34
SHROOM4-201ENST00000289292 COBLO75128 1261 aa17.18■□□□□ 0.34
SHROOM4-201ENST00000289292 PPM1EQ8WY54 764 aa17.18■□□□□ 0.34
SHROOM4-201ENST00000289292 EIF6P56537 245 aaKnown RBP17.18■□□□□ 0.34
SHROOM4-201ENST00000289292 SEC31AO94979 1220 aaKnown RBP17.18■□□□□ 0.34
SHROOM4-201ENST00000289292 ZSCAN26Q16670 478 aa17.18■□□□□ 0.34
SHROOM4-201ENST00000289292 SND1Q7KZF4 910 aaKnown RBP eCLIP17.18■□□□□ 0.34
SHROOM4-201ENST00000289292 ATP6V0A2Q9Y487 856 aa17.18■□□□□ 0.34
SHROOM4-201ENST00000289292 TRPM2O94759 1503 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 ABCC4O15439 1325 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 ITGA6P23229 1130 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 KRT9P35527 623 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 UAP1Q16222 522 aaPredicted RBP17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 METTL22Q9BUU2 404 aaPredicted RBP17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 PFKFB1P16118 471 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 COMMD10Q9Y6G5 202 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 BUB1BO60566 1050 aaPredicted RBP17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 MYCNP04198 464 aaPredicted RBP17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 TTC38Q5R3I4 469 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 SPATA24Q86W54 205 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 GPCPD1Q9NPB8 672 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 MTRF1LQ9UGC7 380 aaKnown RBP17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 DYMQ7RTS9 669 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 DMTNQ08495 405 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 TRIM14Q14142 442 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 B4GALNT4Q76KP1 1039 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 TSNARE1Q96NA8 513 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 USP28Q96RU2 1077 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 CEP83Q9Y592 693 aa17.17■□□□□ 0.34
SHROOM4-201ENST00000289292 TXKP42681 527 aa17.16■□□□□ 0.34
SHROOM4-201ENST00000289292 ASIC2Q16515 512 aa17.16■□□□□ 0.34
SHROOM4-201ENST00000289292 ZNF827Q17R98 1081 aa17.16■□□□□ 0.34
SHROOM4-201ENST00000289292 DDX21Q9NR30 783 aaKnown RBP eCLIP17.16■□□□□ 0.34
SHROOM4-201ENST00000289292 PTPROQ16827 1216 aa17.16■□□□□ 0.34
SHROOM4-201ENST00000289292 ARFGAP2Q8N6H7 521 aa17.16■□□□□ 0.34
SHROOM4-201ENST00000289292 TTC14Q96N46 770 aa17.16■□□□□ 0.34
SHROOM4-201ENST00000289292 TAF5LO75529 589 aa17.16■□□□□ 0.34
SHROOM4-201ENST00000289292 CERS3Q8IU89 383 aa17.16■□□□□ 0.34
SHROOM4-201ENST00000289292 MLKLQ8NB16 471 aa17.16■□□□□ 0.34
SHROOM4-201ENST00000289292 SETDB2Q96T68 719 aa17.16■□□□□ 0.34
SHROOM4-201ENST00000289292 EYA2O00167 538 aa17.16■□□□□ 0.34
SHROOM4-201ENST00000289292 SEL1L2Q5TEA6 688 aa17.16■□□□□ 0.34
SHROOM4-201ENST00000289292 TTC19Q6DKK2 380 aaPredicted RBP17.16■□□□□ 0.34
SHROOM4-201ENST00000289292 SPDYE3A6NKU9 549 aa17.15■□□□□ 0.34
SHROOM4-201ENST00000289292 PARP1P09874 1014 aaKnown RBP17.15■□□□□ 0.34
SHROOM4-201ENST00000289292 RAD51AP2Q09MP3 1159 aa17.15■□□□□ 0.34
SHROOM4-201ENST00000289292 TYW1BQ6NUM6 668 aa17.15■□□□□ 0.34
SHROOM4-201ENST00000289292 E7EVH7 732 aa17.15■□□□□ 0.34
SHROOM4-201ENST00000289292 CCDC26Q8TAB7 109 aa17.15■□□□□ 0.34
SHROOM4-201ENST00000289292 VPS54Q9P1Q0 977 aa17.15■□□□□ 0.34
SHROOM4-201ENST00000289292 CHMP2AO43633 222 aa17.15■□□□□ 0.34
SHROOM4-201ENST00000289292 KRT5P13647 590 aa17.15■□□□□ 0.34
SHROOM4-201ENST00000289292 ZAP70P43403 619 aa17.15■□□□□ 0.34
SHROOM4-201ENST00000289292 GUCY2FP51841 1108 aa17.15■□□□□ 0.34
SHROOM4-201ENST00000289292 TMEM87BQ96K49 555 aa17.15■□□□□ 0.34
SHROOM4-201ENST00000289292 ABCC10Q5T3U5 1492 aa17.15■□□□□ 0.34
SHROOM4-201ENST00000289292 NSFL1CQ9UNZ2 370 aaKnown RBP17.14■□□□□ 0.34
SHROOM4-201ENST00000289292 PPP2R2CQ9Y2T4 447 aa17.14■□□□□ 0.34
SHROOM4-201ENST00000289292 CLIC4Q9Y696 253 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms