RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 MBD4O95243 580 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 PDE1AP54750 535 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 RHBDL3P58872 404 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 NUCB1Q02818 461 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 LRRFIP1Q32MZ4 808 aaKnown RBP7.89□□□□□ -1.15
CD44-204ENST00000279452 SLFNL1Q499Z3 407 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 FKBP1CQ5VVH2 108 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 ZFPM1Q8IX07 1006 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 PI4K2BQ8TCG2 481 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 RILPL2Q969X0 211 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 AIDAQ96BJ3 306 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 FAM163AQ96GL9 167 aaPredicted RBP7.89□□□□□ -1.15
CD44-204ENST00000279452 CCDC136Q96JN2 1154 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 TEPSINQ96N21 525 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 WRNIP1Q96S55 665 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 CRNKL1Q9BZJ0 848 aaKnown RBP7.89□□□□□ -1.15
CD44-204ENST00000279452 DDX4Q9NQI0 724 aaKnown RBP7.89□□□□□ -1.15
CD44-204ENST00000279452 SAP30BPQ9UHR5 308 aaKnown RBP7.89□□□□□ -1.15
CD44-204ENST00000279452 CSADQ9Y600 493 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 TRPM7Q96QT4 1865 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 FLT1P17948 1338 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 IGSF3O75054 1194 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 CHGBP05060 677 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 HLA-DOAP06340 250 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 ADD2P35612 726 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 RASAL3Q86YV0 1011 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 CERS3Q8IU89 383 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 ANKRD13AQ8IZ07 590 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 LCORLQ8N3X6 602 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 CRACR2BQ8N4Y2 399 aaPredicted RBP7.88□□□□□ -1.15
CD44-204ENST00000279452 KBTBD3Q8NAB2 608 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 CCDC102AQ96A19 550 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 SLC10A4Q96EP9 437 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 DDRGK1Q96HY6 314 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 CLMNQ96JQ2 1002 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 BEGAINQ9BUH8 593 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 IDI2Q9BXS1 227 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 ZNF341Q9BYN7 854 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 OSBPL5Q9H0X9 879 aaPredicted RBP7.88□□□□□ -1.15
CD44-204ENST00000279452 ARMT1Q9H993 441 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 ELP3Q9H9T3 547 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 MYH2Q9UKX2 1941 aa7.88□□□□□ -1.15
CD44-204ENST00000279452 RFX7Q2KHR2 1363 aa7.87□□□□□ -1.15
CD44-204ENST00000279452 DDTLA6NHG4 134 aaPredicted RBP7.87□□□□□ -1.15
CD44-204ENST00000279452 FAM196BA6NMK8 535 aa7.87□□□□□ -1.15
CD44-204ENST00000279452 RNF113AO15541 343 aaKnown RBP7.87□□□□□ -1.15
CD44-204ENST00000279452 USP2O75604 605 aaPredicted RBP7.87□□□□□ -1.15
CD44-204ENST00000279452 POLR3DP05423 398 aaPredicted RBP7.87□□□□□ -1.15
CD44-204ENST00000279452 SLC10A3P09131 477 aa7.87□□□□□ -1.15
CD44-204ENST00000279452 PPP4CP60510 307 aa7.87□□□□□ -1.15
CD44-204ENST00000279452 NOGQ13253 232 aa7.87□□□□□ -1.15
CD44-204ENST00000279452 VGLL4Q14135 290 aa7.87□□□□□ -1.15
CD44-204ENST00000279452 TMED8Q6PL24 325 aaPredicted RBP7.87□□□□□ -1.15
CD44-204ENST00000279452 AMOTL1Q8IY63 956 aa7.87□□□□□ -1.15
CD44-204ENST00000279452 DNAJC5GQ8N7S2 189 aa7.87□□□□□ -1.15
CD44-204ENST00000279452 SDR42E1Q8WUS8 393 aa7.87□□□□□ -1.15
CD44-204ENST00000279452 OTUD5Q96G74 571 aa7.87□□□□□ -1.15
CD44-204ENST00000279452 HHIPL1Q96JK4 782 aa7.87□□□□□ -1.15
CD44-204ENST00000279452 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.87□□□□□ -1.15
CD44-204ENST00000279452 PALD1Q9ULE6 856 aa7.87□□□□□ -1.15
CD44-204ENST00000279452 SLC4A4Q9Y6R1 1079 aa7.87□□□□□ -1.15
CD44-204ENST00000279452 AKAP11Q9UKA4 1901 aa7.87□□□□□ -1.15
CD44-204ENST00000279452 SALL3Q9BXA9 1300 aa7.86□□□□□ -1.15
CD44-204ENST00000279452 TCRBV5S4A2TA0A5A2 114 aa7.86□□□□□ -1.15
CD44-204ENST00000279452 APPP05067 770 aa7.86□□□□□ -1.15
CD44-204ENST00000279452 ZFYP08048 801 aaPredicted RBP7.86□□□□□ -1.15
CD44-204ENST00000279452 MAP3K9P80192 1104 aa7.86□□□□□ -1.15
CD44-204ENST00000279452 KIF23Q02241 960 aaPredicted RBP7.86□□□□□ -1.15
CD44-204ENST00000279452 UBE3CQ15386 1083 aa7.86□□□□□ -1.15
CD44-204ENST00000279452 CENPQQ7L2Z9 268 aaPredicted RBP7.86□□□□□ -1.15
CD44-204ENST00000279452 SH3BP5LQ7L8J4 393 aa7.86□□□□□ -1.15
CD44-204ENST00000279452 PLEKHM2Q8IWE5 1019 aa7.86□□□□□ -1.15
CD44-204ENST00000279452 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.86□□□□□ -1.15
CD44-204ENST00000279452 APPBP2Q92624 585 aa7.86□□□□□ -1.15
CD44-204ENST00000279452 ZKSCAN4Q969J2 545 aaPredicted RBP7.86□□□□□ -1.15
CD44-204ENST00000279452 EVI5LQ96CN4 794 aa7.86□□□□□ -1.15
CD44-204ENST00000279452 RIOK1Q9BRS2 568 aaKnown RBP7.86□□□□□ -1.15
CD44-204ENST00000279452 DHX36Q9H2U1 1008 aaKnown RBP7.86□□□□□ -1.15
CD44-204ENST00000279452 PICK1Q9NRD5 415 aa7.86□□□□□ -1.15
CD44-204ENST00000279452 MCM9Q9NXL9 1143 aa7.86□□□□□ -1.15
CD44-204ENST00000279452 STAP2Q9UGK3 403 aa7.86□□□□□ -1.15
CD44-204ENST00000279452 U3KPZ7 1027 aaPredicted RBP7.86□□□□□ -1.15
CD44-204ENST00000279452 DOCK2Q92608 1830 aa7.86□□□□□ -1.15
CD44-204ENST00000279452 PRKAB2O43741 272 aa7.85□□□□□ -1.15
CD44-204ENST00000279452 HSPA1AP0DMV8 641 aaKnown RBP7.85□□□□□ -1.15
CD44-204ENST00000279452 HSPA1BP0DMV9 641 aaKnown RBP7.85□□□□□ -1.15
CD44-204ENST00000279452 SLURP2P0DP57 97 aa7.85□□□□□ -1.15
CD44-204ENST00000279452 PDE4AP27815 886 aa7.85□□□□□ -1.15
CD44-204ENST00000279452 INPP5BP32019 993 aa7.85□□□□□ -1.15
CD44-204ENST00000279452 TDO2P48775 406 aa7.85□□□□□ -1.15
CD44-204ENST00000279452 MAP2K1Q02750 393 aaPredicted RBP7.85□□□□□ -1.15
CD44-204ENST00000279452 MAP3K11Q16584 847 aa7.85□□□□□ -1.15
CD44-204ENST00000279452 LDLRAD1Q5T700 205 aa7.85□□□□□ -1.15
CD44-204ENST00000279452 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.85□□□□□ -1.15
CD44-204ENST00000279452 OPTNQ96CV9 577 aa7.85□□□□□ -1.15
CD44-204ENST00000279452 WNK4Q96J92 1243 aa7.85□□□□□ -1.15
CD44-204ENST00000279452 PUS7LQ9H0K6 701 aaKnown RBP7.85□□□□□ -1.15
CD44-204ENST00000279452 PI4KBQ9UBF8 816 aa7.85□□□□□ -1.15
CD44-204ENST00000279452 ATRNL1Q5VV63 1379 aa7.84□□□□□ -1.15
CD44-204ENST00000279452 COL2A1P02458 1487 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms