RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 UBAP1LF5GYI3 381 aa13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 SMIM22K7EJ46 135 aa13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 MARCH6O60337 910 aa13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 COBLO75128 1261 aa13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 GUCY1A2P33402 732 aa13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 RFC4P35249 363 aa13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 CCDC144BQ3MJ40 725 aa13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 XPO4Q9C0E2 1151 aaKnown RBP13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 KCNF1Q9H3M0 494 aa13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 FBXO3Q9UK99 471 aa13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 ZMYM6O95789 1325 aa13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 ITPK1Q13572 414 aa13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 RTEL1Q9NZ71 1219 aa13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 SAP30BPQ9UHR5 308 aaKnown RBP13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 KCNH3Q9ULD8 1083 aa13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 ZNF654Q8IZM8 581 aa13.64□□□□□ -0.23
SLC13A3-201ENST00000279027 DYNC1I1O14576 645 aa13.63□□□□□ -0.23
SLC13A3-201ENST00000279027 TOP1P11387 765 aaKnown RBP13.63□□□□□ -0.23
SLC13A3-201ENST00000279027 PDCL2Q8N4E4 241 aa13.63□□□□□ -0.23
SLC13A3-201ENST00000279027 FUCA2Q9BTY2 467 aa13.63□□□□□ -0.23
SLC13A3-201ENST00000279027 ALDH8A1Q9H2A2 487 aaPredicted RBP13.63□□□□□ -0.23
SLC13A3-201ENST00000279027 RGPD5Q99666 1765 aa13.63□□□□□ -0.23
SLC13A3-201ENST00000279027 TNKSO95271 1327 aa13.63□□□□□ -0.23
SLC13A3-201ENST00000279027 CEP135Q66GS9 1140 aa13.63□□□□□ -0.23
SLC13A3-201ENST00000279027 CELF1Q92879 486 aaKnown RBP13.63□□□□□ -0.23
SLC13A3-201ENST00000279027 HPS5Q9UPZ3 1129 aa13.63□□□□□ -0.23
SLC13A3-201ENST00000279027 BAZ2BQ9UIF8 2168 aaKnown RBP13.63□□□□□ -0.23
SLC13A3-201ENST00000279027 COL5A2P05997 1499 aaPredicted RBP13.63□□□□□ -0.23
SLC13A3-201ENST00000279027 MARCH10Q8NA82 808 aaPredicted RBP13.63□□□□□ -0.23
SLC13A3-201ENST00000279027 KIAA1524Q8TCG1 905 aa13.63□□□□□ -0.23
SLC13A3-201ENST00000279027 IL17RAQ96F46 866 aa13.63□□□□□ -0.23
SLC13A3-201ENST00000279027 TDRD7Q8NHU6 1098 aaKnown RBP13.62□□□□□ -0.23
SLC13A3-201ENST00000279027 SMARCE1Q969G3 411 aa13.62□□□□□ -0.23
SLC13A3-201ENST00000279027 PDCL3Q9H2J4 239 aa13.62□□□□□ -0.23
SLC13A3-201ENST00000279027 SLIT3O75094 1523 aa13.62□□□□□ -0.23
SLC13A3-201ENST00000279027 C6orf229H3BNL8 230 aa13.62□□□□□ -0.23
SLC13A3-201ENST00000279027 PPP4R3BQ5MIZ7 849 aa13.62□□□□□ -0.23
SLC13A3-201ENST00000279027 KRI1Q8N9T8 703 aaKnown RBP13.62□□□□□ -0.23
SLC13A3-201ENST00000279027 EPB41L4AQ9HCS5 686 aaPredicted RBP13.62□□□□□ -0.23
SLC13A3-201ENST00000279027 YEATS4O95619 227 aa13.62□□□□□ -0.23
SLC13A3-201ENST00000279027 SMARCC1Q92922 1105 aaPredicted RBP13.62□□□□□ -0.23
SLC13A3-201ENST00000279027 PCMTD1Q96MG8 357 aaPredicted RBP13.62□□□□□ -0.23
SLC13A3-201ENST00000279027 CCNL1Q9UK58 526 aaPredicted RBP13.62□□□□□ -0.23
SLC13A3-201ENST00000279027 MAPK8IP1Q9UQF2 711 aa13.62□□□□□ -0.23
SLC13A3-201ENST00000279027 VWA3AA6NCI4 1184 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 GSG1L2A8MUP6 293 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 ATP1A3P13637 1013 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 HIBADHP31937 336 aaKnown RBP13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 MCM7P33993 719 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 RPS8P62241 208 aaKnown RBP13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 FANCBQ8NB91 859 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 NKX2-3Q8TAU0 364 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 CRNKL1Q9BZJ0 848 aaKnown RBP13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 ERVV-1B6SEH8 477 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 IGSF3O75054 1194 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 TPTE2Q6XPS3 522 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 SERTAD1Q9UHV2 236 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 NMT2O60551 498 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 CAVIN2O95810 425 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 GNAT2P19087 354 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 PRIMPOLQ96LW4 560 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 RTCBQ9Y3I0 505 aaKnown RBP13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 FOXN1O15353 648 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 EIF5P55010 431 aaKnown RBP13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 ATL3Q6DD88 541 aa13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 ZNF444Q8N0Y2 327 aaPredicted RBP13.61□□□□□ -0.23
SLC13A3-201ENST00000279027 TRIM75PA6NK02 468 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 CASP1P29466 404 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 FANCCQ00597 558 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 MNS1Q8NEH6 495 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 OXER1Q8TDS5 423 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 AK7Q96M32 723 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 UIMC1Q96RL1 719 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 CDHR2Q9BYE9 1310 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 CYP2D6P10635 497 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 SLC39A14Q15043 492 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 NOSTRINQ8IVI9 506 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 ZNF34Q8IZ26 560 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 MYRIPQ8NFW9 859 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 LY9Q9HBG7 655 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 NAA30Q147X3 362 aaPredicted RBP13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 PIK3AP1Q6ZUJ8 805 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 ILDR1Q86SU0 546 aaPredicted RBP13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 FMR1NBQ8N0W7 255 aaPredicted RBP13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 PLA2G12BQ9BX93 195 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 KAT14Q9H8E8 782 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 PCDHB6Q9Y5E3 794 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 PCDHA5Q9Y5H7 936 aa13.6□□□□□ -0.23
SLC13A3-201ENST00000279027 RIMBP2O15034 1052 aa13.59□□□□□ -0.23
SLC13A3-201ENST00000279027 URI1O94763 535 aaPredicted RBP13.59□□□□□ -0.23
SLC13A3-201ENST00000279027 LONRF3Q496Y0 759 aa13.59□□□□□ -0.23
SLC13A3-201ENST00000279027 TMTC2Q8N394 836 aa13.59□□□□□ -0.23
SLC13A3-201ENST00000279027 LRRC37A3O60309 1634 aa13.59□□□□□ -0.23
SLC13A3-201ENST00000279027 DEXIO95424 95 aa13.59□□□□□ -0.23
SLC13A3-201ENST00000279027 PRDX5P30044 214 aa13.59□□□□□ -0.23
SLC13A3-201ENST00000279027 NLRP12P59046 1061 aa13.59□□□□□ -0.23
SLC13A3-201ENST00000279027 SNW1Q13573 536 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms