RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 VPS37CA5D8V6 355 aaPredicted RBP24.14■■□□□ 1.46
LYSMD2-201ENST00000267838 GOLGA8BA8MQT2 603 aa24.14■■□□□ 1.46
LYSMD2-201ENST00000267838 HPS5Q9UPZ3 1129 aa24.14■■□□□ 1.46
LYSMD2-201ENST00000267838 CYP2D7A0A087X1C5 515 aa24.14■■□□□ 1.45
LYSMD2-201ENST00000267838 USP17L12C9JPN9 530 aa24.14■■□□□ 1.45
LYSMD2-201ENST00000267838 USP17L21D6R901 530 aa24.14■■□□□ 1.45
LYSMD2-201ENST00000267838 TMEM67Q5HYA8 995 aa24.14■■□□□ 1.45
LYSMD2-201ENST00000267838 RTFDC1Q9BY42 306 aaPredicted RBP24.14■■□□□ 1.45
LYSMD2-201ENST00000267838 PTPDC1A2A3K4 754 aa24.13■■□□□ 1.45
LYSMD2-201ENST00000267838 HMGN5P82970 282 aaKnown RBP24.13■■□□□ 1.45
LYSMD2-201ENST00000267838 DOK7Q18PE1 504 aa24.13■■□□□ 1.45
LYSMD2-201ENST00000267838 SH3RF3Q8TEJ3 882 aaPredicted RBP24.13■■□□□ 1.45
LYSMD2-201ENST00000267838 DDX11Q96FC9 970 aa24.13■■□□□ 1.45
LYSMD2-201ENST00000267838 LY9Q9HBG7 655 aa24.13■■□□□ 1.45
LYSMD2-201ENST00000267838 ARPP21Q9UBL0 812 aaPredicted RBP24.13■■□□□ 1.45
LYSMD2-201ENST00000267838 DLEC1Q9Y238 1755 aa24.12■■□□□ 1.45
LYSMD2-201ENST00000267838 SMIM22K7EJ46 135 aa24.12■■□□□ 1.45
LYSMD2-201ENST00000267838 IFIT3O14879 490 aaKnown RBP24.12■■□□□ 1.45
LYSMD2-201ENST00000267838 PCP11498 1178 aaKnown RBP24.12■■□□□ 1.45
LYSMD2-201ENST00000267838 SBK1Q52WX2 424 aa24.12■■□□□ 1.45
LYSMD2-201ENST00000267838 CERS3Q8IU89 383 aa24.12■■□□□ 1.45
LYSMD2-201ENST00000267838 SLF2Q8IX21 1173 aa24.12■■□□□ 1.45
LYSMD2-201ENST00000267838 MTA3Q9BTC8 594 aa24.12■■□□□ 1.45
LYSMD2-201ENST00000267838 LMBRD1Q9NUN5 540 aa24.12■■□□□ 1.45
LYSMD2-201ENST00000267838 ZNF219Q9P2Y4 722 aaPredicted RBP24.12■■□□□ 1.45
LYSMD2-201ENST00000267838 ATP6V1DQ9Y5K8 247 aa24.12■■□□□ 1.45
LYSMD2-201ENST00000267838 G3V3G9 751 aa24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 DHX16O60231 1041 aaKnown RBP24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 LIFRP42702 1097 aa24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 DCAF8Q5TAQ9 597 aa24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 SGMS1Q86VZ5 419 aa24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 FAM184AQ8NB25 1140 aa24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 C7orf43Q8WVR3 580 aa24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 FBXW7Q969H0 707 aa24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 PANK2Q9BZ23 570 aa24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 GPR75-ASB3A0A0A6YYF3 556 aa24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 FGRP09769 529 aa24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 USP5P45974 858 aa24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 SART3Q15020 963 aaKnown RBP24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 KLHL40Q2TBA0 621 aa24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 ESR2Q92731 530 aa24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 UPF1Q92900 1129 aaKnown RBP eCLIP24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 FAM163AQ96GL9 167 aaPredicted RBP24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 SENP2Q9HC62 589 aa24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 SUGT1Q9Y2Z0 365 aa24.11■■□□□ 1.45
LYSMD2-201ENST00000267838 BTDP43251 543 aa24.1■■□□□ 1.45
LYSMD2-201ENST00000267838 FOXD4L6Q3SYB3 417 aaPredicted RBP24.1■■□□□ 1.45
LYSMD2-201ENST00000267838 FOXD4L3Q6VB84 417 aaPredicted RBP24.1■■□□□ 1.45
LYSMD2-201ENST00000267838 NFXL1Q6ZNB6 911 aa24.1■■□□□ 1.45
LYSMD2-201ENST00000267838 CDC37L1Q7L3B6 337 aa24.1■■□□□ 1.45
LYSMD2-201ENST00000267838 MKRN1Q9UHC7 482 aaKnown RBP24.1■■□□□ 1.45
LYSMD2-201ENST00000267838 KIF3AQ9Y496 699 aa24.1■■□□□ 1.45
LYSMD2-201ENST00000267838 PRPF40AO75400 957 aaKnown RBP24.09■■□□□ 1.45
LYSMD2-201ENST00000267838 APOA5Q6Q788 366 aa24.09■■□□□ 1.45
LYSMD2-201ENST00000267838 RAB11FIP4Q86YS3 637 aa24.09■■□□□ 1.45
LYSMD2-201ENST00000267838 RRAGDQ9NQL2 400 aaPredicted RBP24.09■■□□□ 1.45
LYSMD2-201ENST00000267838 MCM9Q9NXL9 1143 aa24.09■■□□□ 1.45
LYSMD2-201ENST00000267838 GAKO14976 1311 aa24.09■■□□□ 1.45
LYSMD2-201ENST00000267838 NAV1Q8NEY1 1877 aa24.09■■□□□ 1.45
LYSMD2-201ENST00000267838 CC2D2BQ6DHV5 1058 aa24.08■■□□□ 1.45
LYSMD2-201ENST00000267838 PODNQ7Z5L7 613 aa24.08■■□□□ 1.45
LYSMD2-201ENST00000267838 CDK5RAP2Q96SN8 1893 aa24.08■■□□□ 1.45
LYSMD2-201ENST00000267838 ERICH2A1L162 156 aa24.08■■□□□ 1.44
LYSMD2-201ENST00000267838 SLC3A2P08195 630 aaKnown RBP24.08■■□□□ 1.44
LYSMD2-201ENST00000267838 CYP2D6P10635 497 aa24.08■■□□□ 1.44
LYSMD2-201ENST00000267838 ZKSCAN3Q9BRR0 538 aa24.08■■□□□ 1.44
LYSMD2-201ENST00000267838 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.08■■□□□ 1.44
LYSMD2-201ENST00000267838 SNED1Q8TER0 1413 aa24.08■■□□□ 1.44
LYSMD2-201ENST00000267838 CCDC69A6NI79 296 aa24.07■■□□□ 1.44
LYSMD2-201ENST00000267838 USP17L8P0C7I0 530 aa24.07■■□□□ 1.44
LYSMD2-201ENST00000267838 PLCG2P16885 1265 aa24.07■■□□□ 1.44
LYSMD2-201ENST00000267838 METAP2P50579 478 aaKnown RBP eCLIP24.07■■□□□ 1.44
LYSMD2-201ENST00000267838 WTAPQ15007 396 aa24.07■■□□□ 1.44
LYSMD2-201ENST00000267838 CERS5Q8N5B7 392 aa24.07■■□□□ 1.44
LYSMD2-201ENST00000267838 TGFBRAP1Q8WUH2 860 aa24.07■■□□□ 1.44
LYSMD2-201ENST00000267838 DBNDD1Q9H9R9 158 aa24.07■■□□□ 1.44
LYSMD2-201ENST00000267838 CPLX1O14810 134 aa24.06■■□□□ 1.44
LYSMD2-201ENST00000267838 ZBTB43O43298 467 aa24.06■■□□□ 1.44
LYSMD2-201ENST00000267838 ORC4O43929 436 aa24.06■■□□□ 1.44
LYSMD2-201ENST00000267838 EVX2Q03828 476 aa24.06■■□□□ 1.44
LYSMD2-201ENST00000267838 UBAC1Q9BSL1 405 aa24.06■■□□□ 1.44
LYSMD2-201ENST00000267838 SLC12A7Q9Y666 1083 aa24.06■■□□□ 1.44
LYSMD2-201ENST00000267838 DDX49Q9Y6V7 483 aaKnown RBP24.06■■□□□ 1.44
LYSMD2-201ENST00000267838 TMTC2Q8N394 836 aa24.06■■□□□ 1.44
LYSMD2-201ENST00000267838 TCHHQ07283 1943 aa24.05■■□□□ 1.44
LYSMD2-201ENST00000267838 KIF13BQ9NQT8 1826 aa24.05■■□□□ 1.44
LYSMD2-201ENST00000267838 H3BQV1 296 aa24.05■■□□□ 1.44
LYSMD2-201ENST00000267838 RANBP6O60518 1105 aaKnown RBP24.05■■□□□ 1.44
LYSMD2-201ENST00000267838 PRDM1O75626 825 aa24.05■■□□□ 1.44
LYSMD2-201ENST00000267838 IFFO2Q5TF58 517 aa24.05■■□□□ 1.44
LYSMD2-201ENST00000267838 C12orf60Q5U649 245 aa24.05■■□□□ 1.44
LYSMD2-201ENST00000267838 MICU3Q86XE3 530 aa24.05■■□□□ 1.44
LYSMD2-201ENST00000267838 DAGLAQ9Y4D2 1042 aa24.05■■□□□ 1.44
LYSMD2-201ENST00000267838 FDPSP14324 419 aaKnown RBP24.04■■□□□ 1.44
LYSMD2-201ENST00000267838 PDE4BQ07343 736 aa24.04■■□□□ 1.44
LYSMD2-201ENST00000267838 SYNE3Q6ZMZ3 975 aa24.04■■□□□ 1.44
LYSMD2-201ENST00000267838 FERMT3Q86UX7 667 aa24.04■■□□□ 1.44
LYSMD2-201ENST00000267838 AMOTL1Q8IY63 956 aa24.04■■□□□ 1.44
LYSMD2-201ENST00000267838 TEX11Q8IYF3 940 aa24.04■■□□□ 1.44
LYSMD2-201ENST00000267838 TTLL6Q8N841 843 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms