RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 AOPEPQ8N6M6 819 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 DDX54Q8TDD1 881 aaKnown RBP6.37□□□□□ -1.39
VCAN-201ENST00000265077 AKR1B15C9JRZ8 316 aaPredicted RBP6.37□□□□□ -1.39
VCAN-201ENST00000265077 DNA2P51530 1060 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 ENO4A6NNW6 628 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 DIXDC1Q155Q3 683 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 BATF3Q9NR55 127 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 CA8P35219 290 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 PPP1R2P41236 205 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 PDE1CQ14123 709 aaPredicted RBP6.37□□□□□ -1.39
VCAN-201ENST00000265077 MIER3Q7Z3K6 550 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 KLHDC4Q8TBB5 520 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 KAT14Q9H8E8 782 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 RRAGBQ5VZM2 374 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 CCHCR1Q8TD31 782 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 CAPS2Q9BXY5 557 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 MTRF1LQ9UGC7 380 aaKnown RBP6.37□□□□□ -1.39
VCAN-201ENST00000265077 RASIP1Q5U651 963 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 PPP1R14CQ8TAE6 165 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 FAM204AQ9H8W3 233 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 IDEP14735 1019 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 LMOD1P29536 600 aaPredicted RBP6.37□□□□□ -1.39
VCAN-201ENST00000265077 MUM1Q2TAK8 710 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 GNPTABQ3T906 1256 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 CEP85Q6P2H3 762 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 PROSER2Q86WR7 435 aaPredicted RBP6.37□□□□□ -1.39
VCAN-201ENST00000265077 YIPF3Q9GZM5 350 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 RABEP2Q9H5N1 569 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 TMOD3Q9NYL9 352 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 TEX14Q8IWB6 1497 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 SCP2P22307 547 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 CREB3L3Q68CJ9 461 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 ZSCAN29Q8IWY8 852 aaPredicted RBP6.37□□□□□ -1.39
VCAN-201ENST00000265077 CRACR2BQ8N4Y2 399 aaPredicted RBP6.37□□□□□ -1.39
VCAN-201ENST00000265077 ABCC1P33527 1531 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 NOL3O60936 208 aaKnown RBP6.37□□□□□ -1.39
VCAN-201ENST00000265077 AK2P54819 239 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 KMT5BQ4FZB7 885 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 PYCARDQ9ULZ3 195 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 RFC1P35251 1148 aaPredicted RBP6.36□□□□□ -1.39
VCAN-201ENST00000265077 BAG1Q99933 345 aaPredicted RBP6.36□□□□□ -1.39
VCAN-201ENST00000265077 TMEM63CQ9P1W3 806 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 SYCP2Q9BX26 1530 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 RUFY3Q7L099 469 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 NECAB1Q8N987 351 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 KRI1Q8N9T8 703 aaKnown RBP6.36□□□□□ -1.39
VCAN-201ENST00000265077 SSH2Q76I76 1423 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 FANCAO15360 1455 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 UQCRFS1P1P0C7P4 283 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 RBM5P52756 815 aaKnown RBP eCLIP6.36□□□□□ -1.39
VCAN-201ENST00000265077 TSHZ3Q63HK5 1081 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 FAM43BQ6ZT52 329 aaPredicted RBP6.36□□□□□ -1.39
VCAN-201ENST00000265077 CCDC85AQ96PX6 553 aaPredicted RBP6.36□□□□□ -1.39
VCAN-201ENST00000265077 SMC6Q96SB8 1091 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 IFNKQ9P0W0 207 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 GRM8O00222 908 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 TNNC1P63316 161 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 ACTR5Q9H9F9 607 aaPredicted RBP6.36□□□□□ -1.39
VCAN-201ENST00000265077 FAF1Q9UNN5 650 aaPredicted RBP6.36□□□□□ -1.39
VCAN-201ENST00000265077 BLMP54132 1417 aaPredicted RBP6.36□□□□□ -1.39
VCAN-201ENST00000265077 PRC1O43663 620 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 TMED1Q13445 227 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 CROCCP2Q86T23 111 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 PLEKHM2Q8IWE5 1019 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 SYCP3Q8IZU3 236 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 KIAA0556O60303 1618 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 TRIM75PA6NK02 468 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 CAND2O75155 1236 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 POLE2P56282 527 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 ZC3H6P61129 1189 aaKnown RBP6.36□□□□□ -1.39
VCAN-201ENST00000265077 PHLDB2Q86SQ0 1253 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 TRIM58Q8NG06 486 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 MORC4Q8TE76 937 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 ZGPATQ8N5A5 531 aaKnown RBP6.36□□□□□ -1.39
VCAN-201ENST00000265077 PDLIM2Q96JY6 352 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 LDHCP07864 332 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 IQUBQ8NA54 791 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 TSNARE1Q96NA8 513 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 SCOCQ9UIL1 159 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 BICRAQ9NZM4 1560 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 MMP14P50281 582 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 ASIC1P78348 528 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 SETDB1Q15047 1291 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 ZNF569Q5MCW4 686 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 CLTAP09496 248 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 SNRPA1P09661 255 aaKnown RBP6.36□□□□□ -1.39
VCAN-201ENST00000265077 CCDC82Q8N4S0 544 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 ITFG2Q969R8 447 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 FERMT2Q96AC1 680 aa6.36□□□□□ -1.39
VCAN-201ENST00000265077 MPHOSPH6Q99547 160 aaKnown RBP6.36□□□□□ -1.39
VCAN-201ENST00000265077 MAP2P11137 1827 aaKnown RBP6.35□□□□□ -1.39
VCAN-201ENST00000265077 TSPY2A6NKD2 308 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 CTIFO43310 598 aaKnown RBP6.35□□□□□ -1.39
VCAN-201ENST00000265077 GIGYF1O75420 1035 aaPredicted RBP6.35□□□□□ -1.39
VCAN-201ENST00000265077 ZBTB16Q05516 673 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 CCDC152Q4G0S7 254 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 KIF24Q5T7B8 1368 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 IFIT1BQ5T764 474 aaKnown RBP6.35□□□□□ -1.39
VCAN-201ENST00000265077 KLHL23Q8NBE8 558 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 CCDC26Q8TAB7 109 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms