RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 TCP10Q12799 353 aa27.37■■□□□ 1.97
APOE-201ENST00000252486 SUPT20HL1Q3ZLR7 823 aa27.37■■□□□ 1.97
APOE-201ENST00000252486 CASC1Q6TDU7 716 aa27.37■■□□□ 1.97
APOE-201ENST00000252486 CWC27Q6UX04 472 aaKnown RBP27.37■■□□□ 1.97
APOE-201ENST00000252486 SEC62Q99442 399 aaKnown RBP27.37■■□□□ 1.97
APOE-201ENST00000252486 OSBPL5Q9H0X9 879 aaPredicted RBP27.37■■□□□ 1.97
APOE-201ENST00000252486 DDX4Q9NQI0 724 aaKnown RBP27.37■■□□□ 1.97
APOE-201ENST00000252486 FLT1P17948 1338 aa27.37■■□□□ 1.97
APOE-201ENST00000252486 RAD50Q92878 1312 aa27.37■■□□□ 1.97
APOE-201ENST00000252486 CDK5RAP2Q96SN8 1893 aa27.36■■□□□ 1.97
APOE-201ENST00000252486 NF2P35240 595 aa27.36■■□□□ 1.97
APOE-201ENST00000252486 CDCA5Q96FF9 252 aa27.36■■□□□ 1.97
APOE-201ENST00000252486 SCAF8Q9UPN6 1271 aaKnown RBP27.36■■□□□ 1.97
APOE-201ENST00000252486 SLC4A4Q9Y6R1 1079 aa27.36■■□□□ 1.97
APOE-201ENST00000252486 GIMAP6Q6P9H5 292 aa27.35■■□□□ 1.97
APOE-201ENST00000252486 MAPKAPK5Q8IW41 473 aa27.35■■□□□ 1.97
APOE-201ENST00000252486 ZSCAN29Q8IWY8 852 aaPredicted RBP27.35■■□□□ 1.97
APOE-201ENST00000252486 TMEM39BQ9GZU3 492 aa27.35■■□□□ 1.97
APOE-201ENST00000252486 DHX36Q9H2U1 1008 aaKnown RBP27.35■■□□□ 1.97
APOE-201ENST00000252486 ATRNL1Q5VV63 1379 aa27.35■■□□□ 1.97
APOE-201ENST00000252486 CDC45O75419 566 aa27.34■■□□□ 1.97
APOE-201ENST00000252486 TEPSINQ96N21 525 aa27.34■■□□□ 1.97
APOE-201ENST00000252486 CCDC171Q6TFL3 1326 aa27.34■■□□□ 1.97
APOE-201ENST00000252486 PATL2C9JE40 543 aaKnown RBP27.33■■□□□ 1.97
APOE-201ENST00000252486 TRAF5O00463 557 aa27.33■■□□□ 1.97
APOE-201ENST00000252486 NACAP1Q9BZK3 213 aa27.33■■□□□ 1.97
APOE-201ENST00000252486 PASKQ96RG2 1323 aa27.33■■□□□ 1.97
APOE-201ENST00000252486 ZFPM1Q8IX07 1006 aa27.32■■□□□ 1.96
APOE-201ENST00000252486 SDR42E1Q8WUS8 393 aa27.32■■□□□ 1.96
APOE-201ENST00000252486 DCP1AQ9NPI6 582 aaPredicted RBP27.32■■□□□ 1.96
APOE-201ENST00000252486 MKRN1Q9UHC7 482 aaKnown RBP27.32■■□□□ 1.96
APOE-201ENST00000252486 PRKAB2O43741 272 aa27.31■■□□□ 1.96
APOE-201ENST00000252486 CCDC129Q6ZRS4 1044 aa27.31■■□□□ 1.96
APOE-201ENST00000252486 AMOTL1Q8IY63 956 aa27.31■■□□□ 1.96
APOE-201ENST00000252486 NAV1Q8NEY1 1877 aa27.3■■□□□ 1.96
APOE-201ENST00000252486 TRPM7Q96QT4 1865 aa27.3■■□□□ 1.96
APOE-201ENST00000252486 GSG1L2A8MUP6 293 aa27.3■■□□□ 1.96
APOE-201ENST00000252486 APPP05067 770 aa27.3■■□□□ 1.96
APOE-201ENST00000252486 HLA-DOAP06340 250 aa27.3■■□□□ 1.96
APOE-201ENST00000252486 NBPF12Q5TAG4 269 aaPredicted RBP27.3■■□□□ 1.96
APOE-201ENST00000252486 PRAMEF18Q5VWM3 479 aa27.3■■□□□ 1.96
APOE-201ENST00000252486 TTC6Q86TZ1 520 aa27.3■■□□□ 1.96
APOE-201ENST00000252486 CSRNP1Q96S65 589 aa27.3■■□□□ 1.96
APOE-201ENST00000252486 DCAF15Q66K64 600 aa27.29■■□□□ 1.96
APOE-201ENST00000252486 ZNF589Q86UQ0 364 aaPredicted RBP27.29■■□□□ 1.96
APOE-201ENST00000252486 MCM9Q9NXL9 1143 aa27.29■■□□□ 1.96
APOE-201ENST00000252486 PI4KBQ9UBF8 816 aa27.29■■□□□ 1.96
APOE-201ENST00000252486 TAOK2Q9UL54 1235 aa27.29■■□□□ 1.96
APOE-201ENST00000252486 MYH1P12882 1939 aa27.29■■□□□ 1.96
APOE-201ENST00000252486 DDTLA6NHG4 134 aaPredicted RBP27.28■■□□□ 1.96
APOE-201ENST00000252486 SGSM2O43147 1006 aa27.28■■□□□ 1.96
APOE-201ENST00000252486 PPP1R12BO60237 982 aaPredicted RBP27.28■■□□□ 1.96
APOE-201ENST00000252486 FKBP1BP68106 108 aa27.28■■□□□ 1.96
APOE-201ENST00000252486 SH3BP5LQ7L8J4 393 aa27.28■■□□□ 1.96
APOE-201ENST00000252486 SAP30BPQ9UHR5 308 aaKnown RBP27.28■■□□□ 1.96
APOE-201ENST00000252486 CELF2O95319 508 aaKnown RBP27.27■■□□□ 1.96
APOE-201ENST00000252486 POLR3DP05423 398 aaPredicted RBP27.27■■□□□ 1.96
APOE-201ENST00000252486 ALX1Q15699 326 aa27.27■■□□□ 1.96
APOE-201ENST00000252486 DLK2Q6UY11 383 aa27.27■■□□□ 1.96
APOE-201ENST00000252486 IFNL3Q8IZI9 196 aa27.27■■□□□ 1.96
APOE-201ENST00000252486 ZNF408Q9H9D4 720 aa27.27■■□□□ 1.96
APOE-201ENST00000252486 ARPP21Q9UBL0 812 aaPredicted RBP27.27■■□□□ 1.96
APOE-201ENST00000252486 PALD1Q9ULE6 856 aa27.27■■□□□ 1.96
APOE-201ENST00000252486 DDX60LQ5H9U9 1706 aaKnown RBP27.27■■□□□ 1.96
APOE-201ENST00000252486 HSPD1P10809 573 aaKnown RBP27.26■■□□□ 1.95
APOE-201ENST00000252486 TDO2P48775 406 aa27.26■■□□□ 1.95
APOE-201ENST00000252486 SBK1Q52WX2 424 aa27.26■■□□□ 1.95
APOE-201ENST00000252486 FOXP4Q8IVH2 680 aaPredicted RBP27.26■■□□□ 1.95
APOE-201ENST00000252486 C2orf69Q8N8R5 385 aa27.26■■□□□ 1.95
APOE-201ENST00000252486 ESYT1Q9BSJ8 1104 aa27.26■■□□□ 1.95
APOE-201ENST00000252486 NAPBQ9H115 298 aa27.26■■□□□ 1.95
APOE-201ENST00000252486 TBC1D12O60347 775 aa27.25■■□□□ 1.95
APOE-201ENST00000252486 FMR1Q06787 632 aaKnown RBP eCLIP27.25■■□□□ 1.958e-9■■□□□ 11.7
APOE-201ENST00000252486 CDAN1Q8IWY9 1227 aa27.25■■□□□ 1.95
APOE-201ENST00000252486 DSCC1Q9BVC3 393 aa27.25■■□□□ 1.95
APOE-201ENST00000252486 HERC5Q9UII4 1024 aaKnown RBP27.25■■□□□ 1.95
APOE-201ENST00000252486 ZMYM6O95789 1325 aa27.24■■□□□ 1.95
APOE-201ENST00000252486 SSC5DA1L4H1 1573 aa27.24■■□□□ 1.95
APOE-201ENST00000252486 MAP3K10Q02779 954 aa27.24■■□□□ 1.95
APOE-201ENST00000252486 ARMC9Q7Z3E5 817 aa27.24■■□□□ 1.95
APOE-201ENST00000252486 TRIM34Q9BYJ4 488 aa27.24■■□□□ 1.95
APOE-201ENST00000252486 EHD4Q9H223 541 aa27.24■■□□□ 1.95
APOE-201ENST00000252486 GBA2Q9HCG7 927 aaPredicted RBP27.24■■□□□ 1.95
APOE-201ENST00000252486 EPB41L4AQ9HCS5 686 aaPredicted RBP27.24■■□□□ 1.95
APOE-201ENST00000252486 PAPPA2Q9BXP8 1791 aa27.24■■□□□ 1.95
APOE-201ENST00000252486 TMEM88BA6NKF7 163 aa27.23■■□□□ 1.95
APOE-201ENST00000252486 USP17L12C9JPN9 530 aa27.23■■□□□ 1.95
APOE-201ENST00000252486 USP17L21D6R901 530 aa27.23■■□□□ 1.95
APOE-201ENST00000252486 VPS53Q5VIR6 699 aa27.23■■□□□ 1.95
APOE-201ENST00000252486 CST9Q5W186 159 aa27.23■■□□□ 1.95
APOE-201ENST00000252486 CTR9Q6PD62 1173 aa27.23■■□□□ 1.95
APOE-201ENST00000252486 KIAA1211Q6ZU35 1233 aa27.23■■□□□ 1.95
APOE-201ENST00000252486 METTL16Q86W50 562 aaKnown RBP27.23■■□□□ 1.95
APOE-201ENST00000252486 ZNF341Q9BYN7 854 aa27.23■■□□□ 1.95
APOE-201ENST00000252486 BAZ2AQ9UIF9 1905 aaKnown RBP27.22■■□□□ 1.95
APOE-201ENST00000252486 UNCXA6NJT0 531 aa27.22■■□□□ 1.95
APOE-201ENST00000252486 APLP1P51693 650 aa27.22■■□□□ 1.95
APOE-201ENST00000252486 C1QTNF8P60827 252 aa27.22■■□□□ 1.95
APOE-201ENST00000252486 TTLL12Q14166 644 aaPredicted RBP27.22■■□□□ 1.95
APOE-201ENST00000252486 C12orf60Q5U649 245 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms