RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SKILP12757 684 aa19.7■□□□□ 0.74
FOXA1-201ENST00000250448 FAM160A1Q05DH4 1040 aa19.7■□□□□ 0.74
FOXA1-201ENST00000250448 APOBRQ0VD83 1088 aa19.7■□□□□ 0.74
FOXA1-201ENST00000250448 ATL3Q6DD88 541 aa19.7■□□□□ 0.74
FOXA1-201ENST00000250448 NYAP1Q6ZVC0 841 aa19.7■□□□□ 0.74
FOXA1-201ENST00000250448 ENGASEQ8NFI3 743 aa19.7■□□□□ 0.74
FOXA1-201ENST00000250448 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.69■□□□□ 0.74
FOXA1-201ENST00000250448 CCDC69A6NI79 296 aa19.69■□□□□ 0.74
FOXA1-201ENST00000250448 GPR101Q96P66 508 aaPredicted RBP19.69■□□□□ 0.74
FOXA1-201ENST00000250448 HELLSQ9NRZ9 838 aa19.69■□□□□ 0.74
FOXA1-201ENST00000250448 ST5P78524 1137 aa19.69■□□□□ 0.74
FOXA1-201ENST00000250448 CCZ1BP86790 482 aa19.69■□□□□ 0.74
FOXA1-201ENST00000250448 CCZ1P86791 482 aaPredicted RBP19.69■□□□□ 0.74
FOXA1-201ENST00000250448 FSIP1Q8NA03 581 aa19.69■□□□□ 0.74
FOXA1-201ENST00000250448 ZNF512BQ96KM6 892 aaPredicted RBP19.69■□□□□ 0.74
FOXA1-201ENST00000250448 TNS1Q9HBL0 1735 aaKnown RBP19.69■□□□□ 0.74
FOXA1-201ENST00000250448 PTPN14Q15678 1187 aa19.69■□□□□ 0.74
FOXA1-201ENST00000250448 CEP57L1Q8IYX8 460 aa19.69■□□□□ 0.74
FOXA1-201ENST00000250448 RPGRQ92834 1020 aaKnown RBP19.69■□□□□ 0.74
FOXA1-201ENST00000250448 A0A087WWV3 80 aa19.68■□□□□ 0.74
FOXA1-201ENST00000250448 TTLL5Q6EMB2 1281 aa19.68■□□□□ 0.74
FOXA1-201ENST00000250448 TXNRD3Q86VQ6 643 aa19.68■□□□□ 0.74
FOXA1-201ENST00000250448 JAG2Q9Y219 1238 aa19.68■□□□□ 0.74
FOXA1-201ENST00000250448 PNPLA7Q6ZV29 1317 aa19.68■□□□□ 0.74
FOXA1-201ENST00000250448 ARAP2Q8WZ64 1704 aa19.68■□□□□ 0.74
FOXA1-201ENST00000250448 HSPD1P10809 573 aaKnown RBP19.68■□□□□ 0.74
FOXA1-201ENST00000250448 FILIP1Q7Z7B0 1213 aa19.68■□□□□ 0.74
FOXA1-201ENST00000250448 SALL1Q9NSC2 1324 aa19.68■□□□□ 0.74
FOXA1-201ENST00000250448 DDX41Q9UJV9 622 aaKnown RBP19.68■□□□□ 0.74
FOXA1-201ENST00000250448 A0A1B0GUL6 1792 aa19.67■□□□□ 0.74
FOXA1-201ENST00000250448 CCT2P78371 535 aaKnown RBP19.67■□□□□ 0.74
FOXA1-201ENST00000250448 VPS37DQ86XT2 251 aa19.67■□□□□ 0.74
FOXA1-201ENST00000250448 HOMEZQ8IX15 550 aa19.67■□□□□ 0.74
FOXA1-201ENST00000250448 AGXT2Q9BYV1 514 aa19.67■□□□□ 0.74
FOXA1-201ENST00000250448 ZNF532Q9HCE3 1301 aa19.67■□□□□ 0.74
FOXA1-201ENST00000250448 ME1P48163 572 aa19.67■□□□□ 0.74
FOXA1-201ENST00000250448 EXOSC10Q01780 885 aaKnown RBP19.67■□□□□ 0.74
FOXA1-201ENST00000250448 UBE4AQ14139 1066 aa19.67■□□□□ 0.74
FOXA1-201ENST00000250448 DEFB132Q7Z7B7 95 aa19.67■□□□□ 0.74
FOXA1-201ENST00000250448 PLCD3Q8N3E9 789 aa19.67■□□□□ 0.74
FOXA1-201ENST00000250448 AOPEPQ8N6M6 819 aa19.67■□□□□ 0.74
FOXA1-201ENST00000250448 FAM84BQ96KN1 310 aaPredicted RBP19.67■□□□□ 0.74
FOXA1-201ENST00000250448 ANKIB1Q9P2G1 1089 aa19.67■□□□□ 0.74
FOXA1-201ENST00000250448 GRAPQ13588 217 aa19.66■□□□□ 0.74
FOXA1-201ENST00000250448 GRAPLQ8TC17 118 aaPredicted RBP19.66■□□□□ 0.74
FOXA1-201ENST00000250448 DSCC1Q9BVC3 393 aa19.66■□□□□ 0.74
FOXA1-201ENST00000250448 MMP10P09238 476 aa19.66■□□□□ 0.74
FOXA1-201ENST00000250448 PDE6AP16499 860 aa19.66■□□□□ 0.74
FOXA1-201ENST00000250448 ADD2P35612 726 aa19.66■□□□□ 0.74
FOXA1-201ENST00000250448 APPBP2Q92624 585 aa19.66■□□□□ 0.74
FOXA1-201ENST00000250448 ABCF2Q9UG63 623 aa19.66■□□□□ 0.74
FOXA1-201ENST00000250448 FOXP2O15409 715 aa19.66■□□□□ 0.74
FOXA1-201ENST00000250448 ILDR1Q86SU0 546 aaPredicted RBP19.66■□□□□ 0.74
FOXA1-201ENST00000250448 MAGEB6Q8N7X4 407 aa19.66■□□□□ 0.74
FOXA1-201ENST00000250448 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.66■□□□□ 0.74
FOXA1-201ENST00000250448 NCOA5Q9HCD5 579 aaKnown RBP19.66■□□□□ 0.74
FOXA1-201ENST00000250448 GUCY1B3Q02153 619 aa19.65■□□□□ 0.74
FOXA1-201ENST00000250448 TTF1Q15361 905 aaPredicted RBP19.65■□□□□ 0.74
FOXA1-201ENST00000250448 CCAR2Q8N163 923 aaKnown RBP19.65■□□□□ 0.74
FOXA1-201ENST00000250448 NAT10Q9H0A0 1025 aaKnown RBP19.65■□□□□ 0.74
FOXA1-201ENST00000250448 ZNF215Q9UL58 517 aaPredicted RBP19.65■□□□□ 0.74
FOXA1-201ENST00000250448 GPAA1O43292 621 aa19.65■□□□□ 0.74
FOXA1-201ENST00000250448 MRPS27Q92552 414 aaKnown RBP19.65■□□□□ 0.74
FOXA1-201ENST00000250448 KCND1Q9NSA2 647 aa19.65■□□□□ 0.74
FOXA1-201ENST00000250448 MYH7P12883 1935 aa19.64■□□□□ 0.74
FOXA1-201ENST00000250448 COL1A1P02452 1464 aaPredicted RBP19.64■□□□□ 0.74
FOXA1-201ENST00000250448 ZFYP08048 801 aaPredicted RBP19.64■□□□□ 0.73
FOXA1-201ENST00000250448 GSDMDP57764 484 aa19.64■□□□□ 0.73
FOXA1-201ENST00000250448 HAND2P61296 217 aa19.64■□□□□ 0.73
FOXA1-201ENST00000250448 CAVIN4Q5BKX8 364 aa19.64■□□□□ 0.73
FOXA1-201ENST00000250448 ZNF397Q8NF99 534 aaPredicted RBP19.64■□□□□ 0.73
FOXA1-201ENST00000250448 PDGFDQ9GZP0 370 aaPredicted RBP19.64■□□□□ 0.73
FOXA1-201ENST00000250448 TRMT1Q9NXH9 659 aaKnown RBP19.64■□□□□ 0.73
FOXA1-201ENST00000250448 KIF18AQ8NI77 898 aa19.64■□□□□ 0.73
FOXA1-201ENST00000250448 CAMKK2Q96RR4 588 aa19.64■□□□□ 0.73
FOXA1-201ENST00000250448 ZNF804BA4D1E1 1349 aa19.63■□□□□ 0.73
FOXA1-201ENST00000250448 E7EWF7 191 aa19.63■□□□□ 0.73
FOXA1-201ENST00000250448 GABPB1Q06547 395 aaPredicted RBP19.63■□□□□ 0.73
FOXA1-201ENST00000250448 FMR1NBQ8N0W7 255 aaPredicted RBP19.63■□□□□ 0.73
FOXA1-201ENST00000250448 NLGN1Q8N2Q7 840 aa19.63■□□□□ 0.73
FOXA1-201ENST00000250448 ERCC4Q92889 916 aaPredicted RBP19.63■□□□□ 0.73
FOXA1-201ENST00000250448 LRP2BPQ9P2M1 347 aa19.63■□□□□ 0.73
FOXA1-201ENST00000250448 MORC2Q9Y6X9 1032 aaPredicted RBP19.63■□□□□ 0.73
FOXA1-201ENST00000250448 LRRFIP1Q32MZ4 808 aaKnown RBP19.63■□□□□ 0.73
FOXA1-201ENST00000250448 CRY2Q49AN0 593 aa19.63■□□□□ 0.73
FOXA1-201ENST00000250448 FBXW7Q969H0 707 aa19.63■□□□□ 0.73
FOXA1-201ENST00000250448 PCDHA7Q9UN72 937 aa19.63■□□□□ 0.73
FOXA1-201ENST00000250448 PPFIA3O75145 1194 aa19.62■□□□□ 0.73
FOXA1-201ENST00000250448 PDIA3P30101 505 aaKnown RBP19.62■□□□□ 0.73
FOXA1-201ENST00000250448 ZNF274Q96GC6 653 aaPredicted RBP19.62■□□□□ 0.73
FOXA1-201ENST00000250448 ERO1AQ96HE7 468 aa19.62■□□□□ 0.73
FOXA1-201ENST00000250448 OSBPL5Q9H0X9 879 aaPredicted RBP19.62■□□□□ 0.73
FOXA1-201ENST00000250448 OLFM4Q6UX06 510 aa19.62■□□□□ 0.73
FOXA1-201ENST00000250448 ANKRD2Q9GZV1 360 aa19.62■□□□□ 0.73
FOXA1-201ENST00000250448 TCRBV5S4A2TA0A5A2 114 aa19.62■□□□□ 0.73
FOXA1-201ENST00000250448 KIF2AO00139 706 aaPredicted RBP19.62■□□□□ 0.73
FOXA1-201ENST00000250448 IGSF3O75054 1194 aa19.62■□□□□ 0.73
FOXA1-201ENST00000250448 NBPF11Q86T75 865 aa19.62■□□□□ 0.73
FOXA1-201ENST00000250448 MIGA1Q8NAN2 632 aa19.62■□□□□ 0.73
FOXA1-201ENST00000250448 RTEL1Q9NZ71 1219 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms