RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ZSCAN29Q8IWY8 852 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-201ENST00000242776 DEFB118Q96PH6 123 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 SIL1Q9H173 461 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 STAP2Q9UGK3 403 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 PTPRFP10586 1907 aa17.23■□□□□ 0.35
DDX39A-201ENST00000242776 NOL9Q5SY16 702 aaKnown RBP17.23■□□□□ 0.35
DDX39A-201ENST00000242776 PRO3102Q9H379 93 aa17.23■□□□□ 0.35
DDX39A-201ENST00000242776 PICK1Q9NRD5 415 aa17.23■□□□□ 0.35
DDX39A-201ENST00000242776 CXCL11O14625 94 aa17.22■□□□□ 0.35
DDX39A-201ENST00000242776 TNPO2O14787 897 aaKnown RBP17.22■□□□□ 0.35
DDX39A-201ENST00000242776 LDHBP07195 334 aaKnown RBP17.22■□□□□ 0.35
DDX39A-201ENST00000242776 DOCK1Q14185 1865 aa17.21■□□□□ 0.35
DDX39A-201ENST00000242776 TRIM75PA6NK02 468 aa17.21■□□□□ 0.35
DDX39A-201ENST00000242776 EYA2O00167 538 aa17.21■□□□□ 0.35
DDX39A-201ENST00000242776 RGS3P49796 1198 aa17.21■□□□□ 0.35
DDX39A-201ENST00000242776 SCYL3Q8IZE3 742 aa17.21■□□□□ 0.35
DDX39A-201ENST00000242776 SMCR8Q8TEV9 937 aaPredicted RBP17.21■□□□□ 0.35
DDX39A-201ENST00000242776 LPIN2Q92539 896 aa17.21■□□□□ 0.35
DDX39A-201ENST00000242776 PHIPQ8WWQ0 1821 aa17.21■□□□□ 0.34
DDX39A-201ENST00000242776 PTPRAP18433 802 aa17.2■□□□□ 0.34
DDX39A-201ENST00000242776 PICALMQ13492 652 aa17.2■□□□□ 0.34
DDX39A-201ENST00000242776 MRPL50Q8N5N7 158 aaKnown RBP17.2■□□□□ 0.34
DDX39A-201ENST00000242776 DIS3LQ8TF46 1054 aaKnown RBP17.2■□□□□ 0.34
DDX39A-201ENST00000242776 PAWRQ96IZ0 340 aaKnown RBP17.2■□□□□ 0.34
DDX39A-201ENST00000242776 LRRFIP2Q9Y608 721 aaKnown RBP17.2■□□□□ 0.34
DDX39A-201ENST00000242776 A0A0G2JLL6 359 aaPredicted RBP17.19■□□□□ 0.34
DDX39A-201ENST00000242776 PHF20L1A8MW92 1017 aa17.19■□□□□ 0.34
DDX39A-201ENST00000242776 FASTKD5Q7L8L6 764 aaKnown RBP17.19■□□□□ 0.34
DDX39A-201ENST00000242776 PRRT2Q7Z6L0 340 aaPredicted RBP17.19■□□□□ 0.34
DDX39A-201ENST00000242776 ANKRD13CQ8N6S4 541 aa17.19■□□□□ 0.34
DDX39A-201ENST00000242776 KIF16BQ96L93 1317 aa17.19■□□□□ 0.34
DDX39A-201ENST00000242776 YTHDC1Q96MU7 727 aaKnown RBP17.19■□□□□ 0.34
DDX39A-201ENST00000242776 USP44Q9H0E7 712 aa17.19■□□□□ 0.34
DDX39A-201ENST00000242776 PHKA1P46020 1223 aa17.18■□□□□ 0.34
DDX39A-201ENST00000242776 RFX5P48382 616 aaPredicted RBP17.18■□□□□ 0.34
DDX39A-201ENST00000242776 ATP2B3Q16720 1220 aa17.18■□□□□ 0.34
DDX39A-201ENST00000242776 SH3BP5LQ7L8J4 393 aa17.18■□□□□ 0.34
DDX39A-201ENST00000242776 C7orf61Q8IZ16 206 aa17.18■□□□□ 0.34
DDX39A-201ENST00000242776 ZMYND8Q9ULU4 1186 aaPredicted RBP17.18■□□□□ 0.34
DDX39A-201ENST00000242776 AFG3L2Q9Y4W6 797 aa17.18■□□□□ 0.34
DDX39A-201ENST00000242776 COL6A3P12111 3177 aa17.18■□□□□ 0.34
DDX39A-201ENST00000242776 DDTLA6NHG4 134 aaPredicted RBP17.18■□□□□ 0.34
DDX39A-201ENST00000242776 FAM196BA6NMK8 535 aa17.18■□□□□ 0.34
DDX39A-201ENST00000242776 ATG9AQ7Z3C6 839 aa17.18■□□□□ 0.34
DDX39A-201ENST00000242776 GNL3LQ9NVN8 582 aaKnown RBP17.18■□□□□ 0.34
DDX39A-201ENST00000242776 ATRNL1Q5VV63 1379 aa17.17■□□□□ 0.34
DDX39A-201ENST00000242776 ZBED9Q6R2W3 1325 aa17.17■□□□□ 0.34
DDX39A-201ENST00000242776 TREML2Q5T2D2 321 aa17.17■□□□□ 0.34
DDX39A-201ENST00000242776 ABCF2Q9UG63 623 aa17.17■□□□□ 0.34
DDX39A-201ENST00000242776 SYN1P17600 705 aa17.16■□□□□ 0.34
DDX39A-201ENST00000242776 ADORA1P30542 326 aa17.16■□□□□ 0.34
DDX39A-201ENST00000242776 DZIP1Q86YF9 867 aaKnown RBP17.16■□□□□ 0.34
DDX39A-201ENST00000242776 COA7Q96BR5 231 aa17.16■□□□□ 0.34
DDX39A-201ENST00000242776 DDX4Q9NQI0 724 aaKnown RBP17.16■□□□□ 0.34
DDX39A-201ENST00000242776 CEP126Q9P2H0 1117 aa17.16■□□□□ 0.34
DDX39A-201ENST00000242776 ATAD5Q96QE3 1844 aa17.16■□□□□ 0.34
DDX39A-201ENST00000242776 LAMA3Q16787 3333 aa17.15■□□□□ 0.34
DDX39A-201ENST00000242776 PXYLP1Q8TE99 480 aa17.15■□□□□ 0.34
DDX39A-201ENST00000242776 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.15■□□□□ 0.347e-7■■■□□ 16.6
DDX39A-201ENST00000242776 DENND2AQ9ULE3 1009 aa17.15■□□□□ 0.34
DDX39A-201ENST00000242776 PA2G4Q9UQ80 394 aaKnown RBP17.15■□□□□ 0.34
DDX39A-201ENST00000242776 ENTPD3O75355 529 aa17.14■□□□□ 0.33
DDX39A-201ENST00000242776 BTDP43251 543 aa17.14■□□□□ 0.33
DDX39A-201ENST00000242776 TRIM32Q13049 653 aa17.14■□□□□ 0.33
DDX39A-201ENST00000242776 IRF5Q13568 498 aa17.14■□□□□ 0.33
DDX39A-201ENST00000242776 Q7L0L9 218 aa17.14■□□□□ 0.33
DDX39A-201ENST00000242776 NECAB2Q7Z6G3 386 aa17.14■□□□□ 0.33
DDX39A-201ENST00000242776 PAK6Q9NQU5 681 aaPredicted RBP17.14■□□□□ 0.33
DDX39A-201ENST00000242776 DDX60LQ5H9U9 1706 aaKnown RBP17.14■□□□□ 0.33
DDX39A-201ENST00000242776 PTPRCP08575 1304 aa17.13■□□□□ 0.33
DDX39A-201ENST00000242776 SSH1Q8WYL5 1049 aa17.13■□□□□ 0.33
DDX39A-201ENST00000242776 IDI2Q9BXS1 227 aa17.13■□□□□ 0.33
DDX39A-201ENST00000242776 AGTPBP1Q9UPW5 1226 aa17.13■□□□□ 0.33
DDX39A-201ENST00000242776 CTNND1O60716 968 aaKnown RBP17.12■□□□□ 0.33
DDX39A-201ENST00000242776 CRISPLD2Q9H0B8 497 aa17.12■□□□□ 0.33
DDX39A-201ENST00000242776 SLC45A1Q9Y2W3 748 aa17.12■□□□□ 0.33
DDX39A-201ENST00000242776 SALL1Q9NSC2 1324 aa17.12■□□□□ 0.33
DDX39A-201ENST00000242776 A0A1W2PPC1 479 aa17.12■□□□□ 0.33
DDX39A-201ENST00000242776 SPP2Q13103 211 aa17.12■□□□□ 0.33
DDX39A-201ENST00000242776 CCDC102BQ68D86 513 aa17.12■□□□□ 0.33
DDX39A-201ENST00000242776 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.12■□□□□ 0.33
DDX39A-201ENST00000242776 GAKO14976 1311 aa17.11■□□□□ 0.33
DDX39A-201ENST00000242776 ZNF521Q96K83 1311 aa17.11■□□□□ 0.33
DDX39A-201ENST00000242776 PEX10O60683 326 aa17.11■□□□□ 0.33
DDX39A-201ENST00000242776 UBTFL1P0CB47 393 aaPredicted RBP17.11■□□□□ 0.33
DDX39A-201ENST00000242776 TIMM10P62072 90 aa17.11■□□□□ 0.33
DDX39A-201ENST00000242776 RASGRF1Q13972 1273 aa17.11■□□□□ 0.33
DDX39A-201ENST00000242776 DEFB123Q8N688 67 aa17.11■□□□□ 0.33
DDX39A-201ENST00000242776 PNMA3Q9UL41 463 aa17.11■□□□□ 0.33
DDX39A-201ENST00000242776 RFX7Q2KHR2 1363 aa17.1■□□□□ 0.33
DDX39A-201ENST00000242776 LOC285556D6RIA3 1793 aa17.1■□□□□ 0.33
DDX39A-201ENST00000242776 HMGCS2P54868 508 aa17.1■□□□□ 0.33
DDX39A-201ENST00000242776 PLXNB2O15031 1838 aa17.1■□□□□ 0.33
DDX39A-201ENST00000242776 SEMA3EO15041 775 aa17.09■□□□□ 0.33
DDX39A-201ENST00000242776 CIAO1O76071 339 aa17.09■□□□□ 0.33
DDX39A-201ENST00000242776 HMGCRP04035 888 aa17.09■□□□□ 0.33
DDX39A-201ENST00000242776 FAM110CQ1W6H9 321 aa17.09■□□□□ 0.33
DDX39A-201ENST00000242776 ZGPATQ8N5A5 531 aaKnown RBP17.09■□□□□ 0.33
DDX39A-201ENST00000242776 GDF15Q99988 308 aa17.09■□□□□ 0.33
DDX39A-201ENST00000242776 HMX1Q9NP08 348 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms