RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 HCLS1P14317 486 aaPredicted RBP6.49□□□□□ -1.37
RFX4-201ENST00000229387 VCAM1P19320 739 aa6.49□□□□□ -1.37
RFX4-201ENST00000229387 SDSP20132 328 aa6.49□□□□□ -1.37
RFX4-201ENST00000229387 FNTAP49354 379 aa6.49□□□□□ -1.37
RFX4-201ENST00000229387 CCDC181Q5TID7 509 aa6.49□□□□□ -1.37
RFX4-201ENST00000229387 FBXW10Q5XX13 1052 aa6.49□□□□□ -1.37
RFX4-201ENST00000229387 CWF19L1Q69YN2 538 aaKnown RBP6.49□□□□□ -1.37
RFX4-201ENST00000229387 TAX1BP1Q86VP1 789 aa6.49□□□□□ -1.37
RFX4-201ENST00000229387 ANKLE2Q86XL3 938 aa6.49□□□□□ -1.37
RFX4-201ENST00000229387 SPDYE1Q8NFV5 336 aaPredicted RBP6.49□□□□□ -1.37
RFX4-201ENST00000229387 UNC45AQ9H3U1 944 aa6.49□□□□□ -1.37
RFX4-201ENST00000229387 MAP2P11137 1827 aaKnown RBP6.48□□□□□ -1.37
RFX4-201ENST00000229387 SRGAP3O43295 1099 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 GJA8P48165 433 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 GCLCP48506 637 aaPredicted RBP6.48□□□□□ -1.37
RFX4-201ENST00000229387 ARMC3Q5W041 872 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 CCDC50Q8IVM0 306 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 B4GALNT2Q8NHY0 566 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 ZFAND2BQ8WV99 257 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 UBXN4Q92575 508 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 GCC1Q96CN9 775 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 OSBPL9Q96SU4 736 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 CDCA7Q9BWT1 371 aaPredicted RBP6.48□□□□□ -1.37
RFX4-201ENST00000229387 TSGA10Q9BZW7 698 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 AXIN2Q9Y2T1 843 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 PLEKHG1Q9ULL1 1385 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 ADGRB2O60241 1585 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 H3BQF6 201 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 ERLIN1O75477 346 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 HIC1Q14526 733 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 ZNF530Q6P9A1 599 aaPredicted RBP6.48□□□□□ -1.37
RFX4-201ENST00000229387 PLA2G4DQ86XP0 818 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 GPR161Q8N6U8 529 aaKnown RBP6.48□□□□□ -1.37
RFX4-201ENST00000229387 PHC3Q8NDX5 983 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 ARFGAP3Q9NP61 516 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 CHPF2Q9P2E5 772 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 TFIP11Q9UBB9 837 aaKnown RBP6.48□□□□□ -1.37
RFX4-201ENST00000229387 TMEM98Q9Y2Y6 226 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 SPDYE3A6NKU9 549 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 SASH1O94885 1247 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 CDR1P51861 262 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 TEFQ10587 303 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 PKP1Q13835 747 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 BMP2KLQ5H9B9 411 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 ELOA2Q8IYF1 753 aaPredicted RBP6.48□□□□□ -1.37
RFX4-201ENST00000229387 SPC24Q8NBT2 197 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 HNRNPLLQ8WVV9 542 aaKnown RBP6.48□□□□□ -1.37
RFX4-201ENST00000229387 ARHGAP45Q92619 1136 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 DCTPP1Q9H773 170 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 SUGT1Q9Y2Z0 365 aa6.48□□□□□ -1.37
RFX4-201ENST00000229387 FLT4P35916 1363 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 CDK12Q9NYV4 1490 aaPredicted RBP6.47□□□□□ -1.37
RFX4-201ENST00000229387 E2F6O75461 281 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 VDRP11473 427 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 MYL6BP14649 208 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 CLK2P49760 499 aaKnown RBP6.47□□□□□ -1.37
RFX4-201ENST00000229387 LIG3P49916 1009 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 ROR2Q01974 943 aaKnown RBP6.47□□□□□ -1.37
RFX4-201ENST00000229387 PLCB4Q15147 1175 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 TAF7Q15545 349 aaPredicted RBP6.47□□□□□ -1.37
RFX4-201ENST00000229387 PROSER3Q2NL68 480 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 ARHGAP22Q7Z5H3 698 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 ANKRD44Q8N8A2 993 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 DTNBP1Q96EV8 351 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 MMADHCQ9H3L0 296 aaPredicted RBP6.47□□□□□ -1.37
RFX4-201ENST00000229387 NLRP2Q9NX02 1062 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 SPATA7Q9P0W8 599 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 THRAP3Q9Y2W1 955 aaKnown RBP6.47□□□□□ -1.37
RFX4-201ENST00000229387 ZC3H4Q9UPT8 1303 aaKnown RBP6.47□□□□□ -1.37
RFX4-201ENST00000229387 NRXN3Q9Y4C0 1643 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 AGLP35573 1532 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 SETD1BQ9UPS6 1966 aaKnown RBP6.47□□□□□ -1.37
RFX4-201ENST00000229387 PI4KAP2A4QPH2 592 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 LIN7AO14910 233 aaPredicted RBP6.47□□□□□ -1.37
RFX4-201ENST00000229387 OSBPP22059 807 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 INPP5BP32019 993 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 KCNJ6P48051 423 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 APOBRQ0VD83 1088 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 RRP12Q5JTH9 1297 aaKnown RBP6.47□□□□□ -1.37
RFX4-201ENST00000229387 INTS3Q68E01 1043 aaKnown RBP6.47□□□□□ -1.37
RFX4-201ENST00000229387 UNC5CLQ8IV45 518 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 CCDC170Q8IYT3 715 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 CEP112Q8N8E3 955 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 PI4KAP1Q8N8J0 262 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 LMBR1Q8WVP7 490 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 SPDL1Q96EA4 605 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 EPAS1Q99814 870 aa6.47□□□□□ -1.37
RFX4-201ENST00000229387 CEP170BQ9Y4F5 1589 aaPredicted RBP6.47□□□□□ -1.37
RFX4-201ENST00000229387 SHTN1A0MZ66 631 aa6.46□□□□□ -1.37
RFX4-201ENST00000229387 TADA3O75528 432 aa6.46□□□□□ -1.37
RFX4-201ENST00000229387 SURF6O75683 361 aaKnown RBP6.46□□□□□ -1.37
RFX4-201ENST00000229387 GCP02774 474 aa6.46□□□□□ -1.37
RFX4-201ENST00000229387 SESN3P58005 492 aa6.46□□□□□ -1.37
RFX4-201ENST00000229387 LRMPQ12912 555 aa6.46□□□□□ -1.37
RFX4-201ENST00000229387 PKN1Q16512 942 aa6.46□□□□□ -1.37
RFX4-201ENST00000229387 QPCTQ16769 361 aa6.46□□□□□ -1.37
RFX4-201ENST00000229387 CWF19L2Q2TBE0 894 aaKnown RBP6.46□□□□□ -1.37
RFX4-201ENST00000229387 MTHFD1LQ6UB35 978 aa6.46□□□□□ -1.37
RFX4-201ENST00000229387 MICALCLQ6ZW33 695 aa6.46□□□□□ -1.37
RFX4-201ENST00000229387 SPATS2Q86XZ4 545 aaKnown RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms