RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 CHMP4CQ96CF2 233 aa20.27■□□□□ 0.83
CDKN1B-201ENST00000228872 ANKZF1Q9H8Y5 726 aa20.27■□□□□ 0.83
CDKN1B-201ENST00000228872 FPGT-TNNI3KV9GXZ4 949 aa20.27■□□□□ 0.83
CDKN1B-201ENST00000228872 ARFGEF2Q9Y6D5 1785 aa20.27■□□□□ 0.83
CDKN1B-201ENST00000228872 SH3TC1Q8TE82 1336 aa20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 E7EWF7 191 aa20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 WDHD1O75717 1129 aaPredicted RBP20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 KARSQ15046 597 aaKnown RBP20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 CHST3Q7LGC8 479 aa20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 SRGAP1Q7Z6B7 1085 aa20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 PDILTQ8N807 584 aa20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 XAGE3Q8WTP9 111 aa20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 AFDNP55196 1824 aaKnown RBP20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 A0A0G2JLW4 131 aa20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 CUTAO60888 179 aa20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 USP5P45974 858 aa20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 TTC31Q49AM3 519 aaPredicted RBP20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 DDX46Q7L014 1031 aaKnown RBP20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 FNBP4Q8N3X1 1017 aaPredicted RBP20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 MSL3Q8N5Y2 521 aaKnown RBP20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 TC2NQ8N9U0 490 aa20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 PIGBQ92521 554 aa20.26■□□□□ 0.83
CDKN1B-201ENST00000228872 IGKV5-2P06315 115 aa20.25■□□□□ 0.83
CDKN1B-201ENST00000228872 SYKP43405 635 aa20.25■□□□□ 0.83
CDKN1B-201ENST00000228872 PIP4K2AP48426 406 aaPredicted RBP20.25■□□□□ 0.83
CDKN1B-201ENST00000228872 DDB1Q16531 1140 aa20.25■□□□□ 0.83
CDKN1B-201ENST00000228872 SYNE3Q6ZMZ3 975 aa20.25■□□□□ 0.83
CDKN1B-201ENST00000228872 COPS6Q7L5N1 327 aa20.25■□□□□ 0.83
CDKN1B-201ENST00000228872 PACS2Q86VP3 889 aa20.25■□□□□ 0.83
CDKN1B-201ENST00000228872 HAUS7Q99871 368 aa20.25■□□□□ 0.83
CDKN1B-201ENST00000228872 RAB21Q9UL25 225 aa20.25■□□□□ 0.83
CDKN1B-201ENST00000228872 FAN1Q9Y2M0 1017 aa20.25■□□□□ 0.83
CDKN1B-201ENST00000228872 N4BP1O75113 896 aaKnown RBP20.25■□□□□ 0.83
CDKN1B-201ENST00000228872 VPS72Q15906 364 aa20.25■□□□□ 0.83
CDKN1B-201ENST00000228872 DESI2Q9BSY9 194 aa20.25■□□□□ 0.83
CDKN1B-201ENST00000228872 DSCC1Q9BVC3 393 aa20.25■□□□□ 0.83
CDKN1B-201ENST00000228872 KIF28PB7ZC32 967 aa20.24■□□□□ 0.83
CDKN1B-201ENST00000228872 EIF3JO75822 258 aaKnown RBP20.24■□□□□ 0.83
CDKN1B-201ENST00000228872 PNOCQ13519 176 aa20.24■□□□□ 0.83
CDKN1B-201ENST00000228872 RGS22Q8NE09 1264 aa20.24■□□□□ 0.83
CDKN1B-201ENST00000228872 GEMIN8Q9NWZ8 242 aaKnown RBP20.24■□□□□ 0.83
CDKN1B-201ENST00000228872 EIF3CLB5ME19 914 aaKnown RBP20.24■□□□□ 0.83
CDKN1B-201ENST00000228872 POTEB2H3BUK9 544 aa20.24■□□□□ 0.83
CDKN1B-201ENST00000228872 ADKP55263 362 aaKnown RBP20.24■□□□□ 0.83
CDKN1B-201ENST00000228872 TFCP2Q12800 502 aa20.24■□□□□ 0.83
CDKN1B-201ENST00000228872 OLFM4Q6UX06 510 aa20.24■□□□□ 0.83
CDKN1B-201ENST00000228872 MSANTD4Q8NCY6 345 aa20.24■□□□□ 0.83
CDKN1B-201ENST00000228872 EIF3CQ99613 913 aaKnown RBP20.24■□□□□ 0.83
CDKN1B-201ENST00000228872 MARCKSP29966 332 aaPredicted RBP20.23■□□□□ 0.83
CDKN1B-201ENST00000228872 NEXNQ0ZGT2 675 aa20.23■□□□□ 0.83
CDKN1B-201ENST00000228872 EPHA10Q5JZY3 1008 aa20.23■□□□□ 0.83
CDKN1B-201ENST00000228872 NGLY1Q96IV0 654 aa20.23■□□□□ 0.83
CDKN1B-201ENST00000228872 C8orf37Q96NL8 207 aa20.23■□□□□ 0.83
CDKN1B-201ENST00000228872 PNKPQ96T60 521 aa20.23■□□□□ 0.83
CDKN1B-201ENST00000228872 MRPL44Q9H9J2 332 aaKnown RBP20.23■□□□□ 0.83
CDKN1B-201ENST00000228872 L1RE1Q9UN81 338 aa20.23■□□□□ 0.83
CDKN1B-201ENST00000228872 HPSEQ9Y251 543 aa20.23■□□□□ 0.83
CDKN1B-201ENST00000228872 NUP188Q5SRE5 1749 aa20.23■□□□□ 0.83
CDKN1B-201ENST00000228872 KBTBD3Q8NAB2 608 aa20.23■□□□□ 0.83
CDKN1B-201ENST00000228872 DBNDD2Q9BQY9 259 aa20.23■□□□□ 0.83
CDKN1B-201ENST00000228872 BRMS1Q9HCU9 246 aa20.23■□□□□ 0.83
CDKN1B-201ENST00000228872 PUF60Q9UHX1 559 aaKnown RBP20.23■□□□□ 0.83
CDKN1B-201ENST00000228872 JRKLQ9Y4A0 524 aa20.23■□□□□ 0.83
CDKN1B-201ENST00000228872 IRX2Q9BZI1 471 aaPredicted RBP20.22■□□□□ 0.83
CDKN1B-201ENST00000228872 GJB4Q9NTQ9 266 aa20.22■□□□□ 0.83
CDKN1B-201ENST00000228872 NEURL1BA8MQ27 555 aa20.22■□□□□ 0.83
CDKN1B-201ENST00000228872 ERLIN1O75477 346 aa20.22■□□□□ 0.83
CDKN1B-201ENST00000228872 SLC39A14Q15043 492 aa20.22■□□□□ 0.83
CDKN1B-201ENST00000228872 MYD88Q99836 296 aa20.22■□□□□ 0.83
CDKN1B-201ENST00000228872 ABCB6Q9NP58 842 aa20.22■□□□□ 0.83
CDKN1B-201ENST00000228872 GPHNQ9NQX3 736 aaPredicted RBP20.22■□□□□ 0.83
CDKN1B-201ENST00000228872 MKRN1Q9UHC7 482 aaKnown RBP20.22■□□□□ 0.83
CDKN1B-201ENST00000228872 KIF23Q02241 960 aaPredicted RBP20.21■□□□□ 0.83
CDKN1B-201ENST00000228872 SPECC1LQ69YQ0 1117 aa20.21■□□□□ 0.83
CDKN1B-201ENST00000228872 CEP112Q8N8E3 955 aa20.21■□□□□ 0.83
CDKN1B-201ENST00000228872 COPRSQ9NQ92 184 aa20.21■□□□□ 0.83
CDKN1B-201ENST00000228872 CCDC9Q9Y3X0 531 aaKnown RBP20.21■□□□□ 0.83
CDKN1B-201ENST00000228872 GUCY2CP25092 1073 aa20.21■□□□□ 0.83
CDKN1B-201ENST00000228872 PDE4BQ07343 736 aa20.21■□□□□ 0.83
CDKN1B-201ENST00000228872 METTL22Q9BUU2 404 aaPredicted RBP20.21■□□□□ 0.83
CDKN1B-201ENST00000228872 SUGCTQ9HAC7 445 aa20.21■□□□□ 0.83
CDKN1B-201ENST00000228872 HELLSQ9NRZ9 838 aa20.21■□□□□ 0.83
CDKN1B-201ENST00000228872 AKAP2Q9Y2D5 859 aa20.21■□□□□ 0.83
CDKN1B-201ENST00000228872 PTCD1O75127 700 aaKnown RBP20.2■□□□□ 0.82
CDKN1B-201ENST00000228872 HSP90AA4PQ58FG1 418 aa20.2■□□□□ 0.82
CDKN1B-201ENST00000228872 SHC4Q6S5L8 630 aa20.2■□□□□ 0.82
CDKN1B-201ENST00000228872 ANKRD13DQ6ZTN6 518 aa20.2■□□□□ 0.82
CDKN1B-201ENST00000228872 CDC23Q9UJX2 597 aa20.2■□□□□ 0.82
CDKN1B-201ENST00000228872 ASAP1Q9ULH1 1129 aa20.2■□□□□ 0.82
CDKN1B-201ENST00000228872 CORO7P57737 925 aa20.2■□□□□ 0.82
CDKN1B-201ENST00000228872 MTF1Q14872 753 aa20.2■□□□□ 0.82
CDKN1B-201ENST00000228872 LRRC31Q6UY01 552 aa20.2■□□□□ 0.82
CDKN1B-201ENST00000228872 TEX13AQ9BXU3 409 aaPredicted RBP20.2■□□□□ 0.82
CDKN1B-201ENST00000228872 GCKRQ14397 625 aa20.2■□□□□ 0.82
CDKN1B-201ENST00000228872 METTL16Q86W50 562 aaKnown RBP20.2■□□□□ 0.82
CDKN1B-201ENST00000228872 THSD7AQ9UPZ6 1657 aa20.19■□□□□ 0.82
CDKN1B-201ENST00000228872 CCDC175P0C221 793 aa20.19■□□□□ 0.82
CDKN1B-201ENST00000228872 HSPD1P10809 573 aaKnown RBP20.19■□□□□ 0.82
CDKN1B-201ENST00000228872 CDC27P30260 824 aa20.19■□□□□ 0.82
CDKN1B-201ENST00000228872 RFX5P48382 616 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms