RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 ATP6V1AP38606 617 aa20.15■□□□□ 0.82
PRPF19-201ENST00000227524 EIF5P55010 431 aaKnown RBP20.15■□□□□ 0.82
PRPF19-201ENST00000227524 ETF1P62495 437 aaKnown RBP20.15■□□□□ 0.82
PRPF19-201ENST00000227524 HOMER1Q86YM7 354 aa20.15■□□□□ 0.82
PRPF19-201ENST00000227524 FAM237AA0A1B0GTK4 181 aa20.14■□□□□ 0.81
PRPF19-201ENST00000227524 PCCAP05165 728 aaPredicted RBP20.14■□□□□ 0.81
PRPF19-201ENST00000227524 UBASH3AP57075 661 aa20.14■□□□□ 0.81
PRPF19-201ENST00000227524 PTPAQ15257 358 aa20.14■□□□□ 0.81
PRPF19-201ENST00000227524 PI16Q6UXB8 463 aa20.14■□□□□ 0.81
PRPF19-201ENST00000227524 FAM89AQ96GI7 184 aa20.14■□□□□ 0.81
PRPF19-201ENST00000227524 ANGEL1Q9UNK9 670 aaKnown RBP20.14■□□□□ 0.81
PRPF19-201ENST00000227524 PNOCQ13519 176 aa20.14■□□□□ 0.81
PRPF19-201ENST00000227524 KRT40Q6A162 431 aa20.14■□□□□ 0.81
PRPF19-201ENST00000227524 NLRP10Q86W26 655 aa20.14■□□□□ 0.81
PRPF19-201ENST00000227524 JMYQ8N9B5 988 aa20.14■□□□□ 0.81
PRPF19-201ENST00000227524 TMX1Q9H3N1 280 aa20.14■□□□□ 0.81
PRPF19-201ENST00000227524 TBC1D2BQ9UPU7 963 aa20.14■□□□□ 0.81
PRPF19-201ENST00000227524 COL5A3P25940 1745 aaPredicted RBP20.13■□□□□ 0.81
PRPF19-201ENST00000227524 SERPINC1P01008 464 aa20.13■□□□□ 0.81
PRPF19-201ENST00000227524 GPTP24298 496 aa20.13■□□□□ 0.81
PRPF19-201ENST00000227524 CRKLP46109 303 aaKnown RBP20.13■□□□□ 0.81
PRPF19-201ENST00000227524 METAP2P50579 478 aaKnown RBP eCLIP20.13■□□□□ 0.81
PRPF19-201ENST00000227524 RESP18Q5W5W9 173 aa20.13■□□□□ 0.81
PRPF19-201ENST00000227524 SYNE4Q8N205 404 aa20.13■□□□□ 0.81
PRPF19-201ENST00000227524 ZBTB38Q8NAP3 1195 aaPredicted RBP20.13■□□□□ 0.81
PRPF19-201ENST00000227524 DNAI1Q9UI46 699 aa20.13■□□□□ 0.81
PRPF19-201ENST00000227524 DENND2AQ9ULE3 1009 aa20.13■□□□□ 0.81
PRPF19-201ENST00000227524 MYO5AQ9Y4I1 1855 aaKnown RBP20.13■□□□□ 0.81
PRPF19-201ENST00000227524 RIC1Q4ADV7 1423 aa20.13■□□□□ 0.81
PRPF19-201ENST00000227524 SH2B2O14492 632 aaPredicted RBP20.12■□□□□ 0.81
PRPF19-201ENST00000227524 CDKL5O76039 1030 aa20.12■□□□□ 0.81
PRPF19-201ENST00000227524 TRDNQ13061 729 aa20.12■□□□□ 0.81
PRPF19-201ENST00000227524 BMS1Q14692 1282 aaKnown RBP20.12■□□□□ 0.81
PRPF19-201ENST00000227524 CYB5R4Q7L1T6 521 aa20.12■□□□□ 0.81
PRPF19-201ENST00000227524 DZIP3Q86Y13 1208 aaKnown RBP20.12■□□□□ 0.81
PRPF19-201ENST00000227524 TBC1D10CQ8IV04 446 aa20.12■□□□□ 0.81
PRPF19-201ENST00000227524 VSTM4Q8IW00 320 aa20.12■□□□□ 0.81
PRPF19-201ENST00000227524 MAP3K14Q99558 947 aa20.12■□□□□ 0.81
PRPF19-201ENST00000227524 CCDC87Q9NVE4 849 aa20.12■□□□□ 0.81
PRPF19-201ENST00000227524 ATRNO75882 1429 aa20.12■□□□□ 0.81
PRPF19-201ENST00000227524 CLCN6P51797 869 aa20.12■□□□□ 0.81
PRPF19-201ENST00000227524 CFAP100Q494V2 611 aa20.12■□□□□ 0.81
PRPF19-201ENST00000227524 TRIM65Q6PJ69 517 aa20.12■□□□□ 0.81
PRPF19-201ENST00000227524 PTF1AQ7RTS3 328 aa20.12■□□□□ 0.81
PRPF19-201ENST00000227524 NKX2-3Q8TAU0 364 aa20.12■□□□□ 0.81
PRPF19-201ENST00000227524 PLA2G12BQ9BX93 195 aa20.12■□□□□ 0.81
PRPF19-201ENST00000227524 ERVV-1B6SEH8 477 aa20.11■□□□□ 0.81
PRPF19-201ENST00000227524 GNL2Q13823 731 aaKnown RBP20.11■□□□□ 0.81
PRPF19-201ENST00000227524 ARHGAP29Q52LW3 1261 aa20.11■□□□□ 0.81
PRPF19-201ENST00000227524 ZNF831Q5JPB2 1677 aa20.11■□□□□ 0.81
PRPF19-201ENST00000227524 MYO1BO43795 1136 aa20.11■□□□□ 0.81
PRPF19-201ENST00000227524 RXRAP19793 462 aa20.11■□□□□ 0.81
PRPF19-201ENST00000227524 TAF7LQ5H9L4 462 aa20.11■□□□□ 0.81
PRPF19-201ENST00000227524 TAF3Q5VWG9 929 aa20.11■□□□□ 0.81
PRPF19-201ENST00000227524 OLFM4Q6UX06 510 aa20.11■□□□□ 0.81
PRPF19-201ENST00000227524 METTL16Q86W50 562 aaKnown RBP20.11■□□□□ 0.81
PRPF19-201ENST00000227524 REXO1L1PQ8IX06 675 aa20.11■□□□□ 0.81
PRPF19-201ENST00000227524 CCDC85AQ96PX6 553 aaPredicted RBP20.11■□□□□ 0.81
PRPF19-201ENST00000227524 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.11■□□□□ 0.818e-8■■■■□ 25
PRPF19-201ENST00000227524 ST7Q9NRC1 585 aa20.11■□□□□ 0.81
PRPF19-201ENST00000227524 UBN2Q6ZU65 1347 aa20.1■□□□□ 0.81
PRPF19-201ENST00000227524 TMEM232C9JQI7 657 aa20.1■□□□□ 0.81
PRPF19-201ENST00000227524 CDC27P30260 824 aa20.1■□□□□ 0.81
PRPF19-201ENST00000227524 ADD2P35612 726 aa20.1■□□□□ 0.81
PRPF19-201ENST00000227524 APOA5Q6Q788 366 aa20.1■□□□□ 0.81
PRPF19-201ENST00000227524 FCHSD1Q86WN1 690 aa20.1■□□□□ 0.81
PRPF19-201ENST00000227524 PHKBQ93100 1093 aa20.1■□□□□ 0.81
PRPF19-201ENST00000227524 CLIC6Q96NY7 704 aa20.1■□□□□ 0.81
PRPF19-201ENST00000227524 FHOD1Q9Y613 1164 aa20.1■□□□□ 0.81
PRPF19-201ENST00000227524 CUTAO60888 179 aa20.1■□□□□ 0.81
PRPF19-201ENST00000227524 TOP1P11387 765 aaKnown RBP20.1■□□□□ 0.81
PRPF19-201ENST00000227524 MCAMP43121 646 aa20.1■□□□□ 0.81
PRPF19-201ENST00000227524 CPLX2Q6PUV4 134 aaKnown RBP20.1■□□□□ 0.81
PRPF19-201ENST00000227524 CDHR2Q9BYE9 1310 aa20.09■□□□□ 0.81
PRPF19-201ENST00000227524 FANCGO15287 622 aa20.09■□□□□ 0.81
PRPF19-201ENST00000227524 CSF1RP07333 972 aa20.09■□□□□ 0.81
PRPF19-201ENST00000227524 GOLGA8FQ08AF8 430 aa20.09■□□□□ 0.81
PRPF19-201ENST00000227524 GOLGA8DPQ0D2H9 430 aa20.09■□□□□ 0.81
PRPF19-201ENST00000227524 UTP14AQ9BVJ6 771 aaKnown RBP20.09■□□□□ 0.81
PRPF19-201ENST00000227524 MYH3P11055 1940 aa20.09■□□□□ 0.81
PRPF19-201ENST00000227524 CHD4Q14839 1912 aa20.09■□□□□ 0.81
PRPF19-201ENST00000227524 LONRF3Q496Y0 759 aa20.08■□□□□ 0.81
PRPF19-201ENST00000227524 KRBA2Q6ZNG9 492 aa20.08■□□□□ 0.81
PRPF19-201ENST00000227524 ZNF34Q8IZ26 560 aa20.08■□□□□ 0.81
PRPF19-201ENST00000227524 SMARCC1Q92922 1105 aaPredicted RBP20.08■□□□□ 0.81
PRPF19-201ENST00000227524 SENP2Q9HC62 589 aa20.08■□□□□ 0.81
PRPF19-201ENST00000227524 FANCLQ9NW38 375 aa20.08■□□□□ 0.81
PRPF19-201ENST00000227524 TAOK2Q9UL54 1235 aa20.08■□□□□ 0.81
PRPF19-201ENST00000227524 IFIT5Q13325 482 aaKnown RBP20.08■□□□□ 0.8
PRPF19-201ENST00000227524 MICU3Q86XE3 530 aa20.08■□□□□ 0.8
PRPF19-201ENST00000227524 TMEM139Q8IV31 216 aa20.08■□□□□ 0.8
PRPF19-201ENST00000227524 SRRTQ9BXP5 876 aaKnown RBP20.08■□□□□ 0.8
PRPF19-201ENST00000227524 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.08■□□□□ 0.8
PRPF19-201ENST00000227524 INTS13Q9NVM9 706 aa20.08■□□□□ 0.8
PRPF19-201ENST00000227524 TADA3O75528 432 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 FAM193AP78312 1265 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 NTRK3Q16288 839 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 CCDC102BQ68D86 513 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 FOXP4Q8IVH2 680 aaPredicted RBP20.07■□□□□ 0.8
PRPF19-201ENST00000227524 CNNM3Q8NE01 707 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms