RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 USP17L22D6RA61 530 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 USP17L17D6RBQ6 530 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 USP17L19D6RCP7 530 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 USP17L20D6RJB6 530 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 RNF223E7ERA6 249 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 VAMP4O75379 141 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 TCF3P15923 654 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 RPS8P62241 208 aaKnown RBP7.13□□□□□ -1.27
AFP-201ENST00000226359 USP17L24Q0WX57 530 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 TNIP1Q15025 636 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 PNMA8AQ86V59 439 aaPredicted RBP7.13□□□□□ -1.27
AFP-201ENST00000226359 GPC2Q8N158 579 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 LINS1Q8NG48 757 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 ANKIB1Q9P2G1 1089 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 SLX4Q8IY92 1834 aa7.12□□□□□ -1.27
AFP-201ENST00000226359 DDNO94850 711 aaPredicted RBP7.12□□□□□ -1.27
AFP-201ENST00000226359 CT47B1P0C2W7 299 aaPredicted RBP7.12□□□□□ -1.27
AFP-201ENST00000226359 TAGLNQ01995 201 aaKnown RBP7.12□□□□□ -1.27
AFP-201ENST00000226359 AOC3Q16853 763 aa7.12□□□□□ -1.27
AFP-201ENST00000226359 EAPPQ56P03 285 aaPredicted RBP7.12□□□□□ -1.27
AFP-201ENST00000226359 TAF7LQ5H9L4 462 aa7.12□□□□□ -1.27
AFP-201ENST00000226359 OLFM4Q6UX06 510 aa7.12□□□□□ -1.27
AFP-201ENST00000226359 UBE3BQ7Z3V4 1068 aa7.12□□□□□ -1.27
AFP-201ENST00000226359 LDHDQ86WU2 507 aa7.12□□□□□ -1.27
AFP-201ENST00000226359 RTFDC1Q9BY42 306 aaPredicted RBP7.12□□□□□ -1.27
AFP-201ENST00000226359 BIN2Q9UBW5 565 aaPredicted RBP7.12□□□□□ -1.27
AFP-201ENST00000226359 GGA1Q9UJY5 639 aa7.12□□□□□ -1.27
AFP-201ENST00000226359 ZNRF3Q9ULT6 936 aa7.12□□□□□ -1.27
AFP-201ENST00000226359 CHMP3Q9Y3E7 222 aa7.12□□□□□ -1.27
AFP-201ENST00000226359 ZNF541Q9H0D2 1346 aa7.12□□□□□ -1.27
AFP-201ENST00000226359 ANKRD33BA6NCL7 494 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 FZD9O00144 591 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 UFL1O94874 794 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 ERCC3P19447 782 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 PRELPP51888 382 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 KIAA2012Q0VF49 1180 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 BAP1Q92560 729 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 MPHOSPH8Q99549 860 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 C9orf78Q9NZ63 289 aaPredicted RBP7.11□□□□□ -1.27
AFP-201ENST00000226359 MKRN1Q9UHC7 482 aaKnown RBP7.11□□□□□ -1.27
AFP-201ENST00000226359 NSFL1CQ9UNZ2 370 aaKnown RBP7.11□□□□□ -1.27
AFP-201ENST00000226359 FER1L6Q2WGJ9 1857 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 MAGEB6P1A0A0J9YX57 407 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 ALDH1L1O75891 902 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 EPHX2P34913 555 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 KCNJ4P48050 445 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 GCKRQ14397 625 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 CWF19L2Q2TBE0 894 aaKnown RBP7.11□□□□□ -1.27
AFP-201ENST00000226359 CIAPIN1Q6FI81 312 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 SLC4A10Q6U841 1118 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 G2E3Q7L622 706 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 NPAS4Q8IUM7 802 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 CELF1Q92879 486 aaKnown RBP7.11□□□□□ -1.27
AFP-201ENST00000226359 CCDC85AQ96PX6 553 aaPredicted RBP7.11□□□□□ -1.27
AFP-201ENST00000226359 ZC3H12CQ9C0D7 883 aaKnown RBP7.11□□□□□ -1.27
AFP-201ENST00000226359 SRCIN1Q9C0H9 1055 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 SMC4Q9NTJ3 1288 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 PTPRCP08575 1304 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 XDHP47989 1333 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 RTL9Q8NET4 1388 aa7.11□□□□□ -1.27
AFP-201ENST00000226359 WDR90Q96KV7 1748 aa7.1□□□□□ -1.27
AFP-201ENST00000226359 CACNA1SQ13698 1873 aa7.1□□□□□ -1.27
AFP-201ENST00000226359 ANKRD18BA2A2Z9 1011 aa7.1□□□□□ -1.27
AFP-201ENST00000226359 FAM196BA6NMK8 535 aa7.1□□□□□ -1.27
AFP-201ENST00000226359 IGKV5-2P06315 115 aa7.1□□□□□ -1.27
AFP-201ENST00000226359 ATP2B4P23634 1241 aa7.1□□□□□ -1.27
AFP-201ENST00000226359 PTK7Q13308 1070 aa7.1□□□□□ -1.27
AFP-201ENST00000226359 PDXDC2PQ6P474 469 aa7.1□□□□□ -1.27
AFP-201ENST00000226359 SH3BP5LQ7L8J4 393 aa7.1□□□□□ -1.27
AFP-201ENST00000226359 ARMC2Q8NEN0 867 aa7.1□□□□□ -1.27
AFP-201ENST00000226359 ADAM32Q8TC27 787 aa7.1□□□□□ -1.27
AFP-201ENST00000226359 PLA2G12BQ9BX93 195 aa7.1□□□□□ -1.27
AFP-201ENST00000226359 ANKRD2Q9GZV1 360 aa7.1□□□□□ -1.27
AFP-201ENST00000226359 TAF1DQ9H5J8 278 aaPredicted RBP7.1□□□□□ -1.27
AFP-201ENST00000226359 HDAC5Q9UQL6 1122 aa7.1□□□□□ -1.27
AFP-201ENST00000226359 ZNF521Q96K83 1311 aa7.1□□□□□ -1.27
AFP-201ENST00000226359 NEFLP07196 543 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 GPSM2P81274 684 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 PRR20EP86478 221 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 PRR20CP86479 221 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 PRR20DP86480 221 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 PRR20BP86481 221 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 PRR20AP86496 221 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 SLFN5Q08AF3 891 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 IFIT5Q13325 482 aaKnown RBP7.09□□□□□ -1.27
AFP-201ENST00000226359 ALDH1L2Q3SY69 923 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 C4orf48Q5BLP8 95 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 JARID2Q92833 1246 aaPredicted RBP7.09□□□□□ -1.27
AFP-201ENST00000226359 FOXJ1Q92949 421 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 LAMB2P55268 1798 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 SNED1Q8TER0 1413 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 H7C1D1 291 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 H7C1W4 665 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 RASA1P20936 1047 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 PTK2Q05397 1052 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 CCDC57Q2TAC2 916 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 USP50Q70EL3 339 aaPredicted RBP7.09□□□□□ -1.27
AFP-201ENST00000226359 PLEKHM2Q8IWE5 1019 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 ZNF511Q8NB15 262 aa7.09□□□□□ -1.27
AFP-201ENST00000226359 FAM200AQ8TCP9 573 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms