RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Wasf1Q8R5H6 559 aa17.99■□□□□ 0.47
Vcan-201ENSMUST00000109543 NenfQ9CQ45 171 aa17.99■□□□□ 0.47
Vcan-201ENSMUST00000109543 Mtx1P47802 317 aa17.98■□□□□ 0.47
Vcan-201ENSMUST00000109543 Bap1Q99PU7 728 aa17.98■□□□□ 0.47
Vcan-201ENSMUST00000109543 Mrps25Q9D125 171 aaKnown RBP17.98■□□□□ 0.47
Vcan-201ENSMUST00000109543 Stxbp4Q9WV89 557 aa17.98■□□□□ 0.47
Vcan-201ENSMUST00000109543 Rps8P62242 208 aaKnown RBP17.98■□□□□ 0.47
Vcan-201ENSMUST00000109543 SfswapQ3USH5 945 aaKnown RBP17.98■□□□□ 0.47
Vcan-201ENSMUST00000109543 Ehd2Q8BH64 543 aa17.98■□□□□ 0.47
Vcan-201ENSMUST00000109543 Sde2Q8K1J5 448 aaKnown RBP17.98■□□□□ 0.47
Vcan-201ENSMUST00000109543 Tlcd1Q99JT6 247 aa17.98■□□□□ 0.47
Vcan-201ENSMUST00000109543 IqcgQ80W32 419 aa17.97■□□□□ 0.47
Vcan-201ENSMUST00000109543 Inpp5bQ8K337 993 aa17.97■□□□□ 0.47
Vcan-201ENSMUST00000109543 Duox1A2AQ92 1551 aa17.97■□□□□ 0.47
Vcan-201ENSMUST00000109543 Myh15E9Q264 1925 aa17.97■□□□□ 0.47
Vcan-201ENSMUST00000109543 Myh4Q5SX39 1939 aa17.97■□□□□ 0.47
Vcan-201ENSMUST00000109543 A0A1W2P7S8 802 aa17.97■□□□□ 0.47
Vcan-201ENSMUST00000109543 Pet2A2AHY8 747 aa17.97■□□□□ 0.47
Vcan-201ENSMUST00000109543 Zscan29E9Q5B4 869 aa17.97■□□□□ 0.47
Vcan-201ENSMUST00000109543 Hspa1lP16627 641 aa17.97■□□□□ 0.47
Vcan-201ENSMUST00000109543 Cdc5lQ6A068 802 aaKnown RBP17.97■□□□□ 0.47
Vcan-201ENSMUST00000109543 Slu7Q8BHJ9 585 aa17.97■□□□□ 0.47
Vcan-201ENSMUST00000109543 Letm1Q9Z2I0 738 aa17.97■□□□□ 0.47
Vcan-201ENSMUST00000109543 Prss40A6H6T1 365 aa17.96■□□□□ 0.47
Vcan-201ENSMUST00000109543 Gm7347D3YYI9 267 aa17.96■□□□□ 0.47
Vcan-201ENSMUST00000109543 Speer4aF8VPX6 267 aa17.96■□□□□ 0.47
Vcan-201ENSMUST00000109543 Tpd52l1O54818 204 aa17.96■□□□□ 0.47
Vcan-201ENSMUST00000109543 Sec23aQ01405 765 aa17.96■□□□□ 0.47
Vcan-201ENSMUST00000109543 Gas2l3Q3UWW6 683 aa17.96■□□□□ 0.47
Vcan-201ENSMUST00000109543 Prpf4bQ61136 1007 aaKnown RBP17.96■□□□□ 0.47
Vcan-201ENSMUST00000109543 HlfQ8BW74 295 aa17.96■□□□□ 0.47
Vcan-201ENSMUST00000109543 Tbc1d8bA3KGB4 1114 aa17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 Ythdc1E9Q5K9 736 aaKnown RBP17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 Ppfibp2O35711 882 aa17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 Il15P48346 162 aa17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 Fam83bQ0VBM2 1012 aa17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 MlphQ91V27 590 aa17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 Adarb2Q9JI20 745 aa17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 Large1Q9Z1M7 756 aa17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 Stk39Q9Z1W9 556 aa17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 AfdnQ9QZQ1 1820 aaKnown RBP17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 Wdr78E9PYY5 807 aa17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 Gm973E9Q295 1059 aa17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 Ehmt1Q5DW34 1296 aa17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 Tbc1d5Q80XQ2 815 aa17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 Haus7Q8BKT8 364 aa17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 Tcp11l1Q8BTG3 509 aa17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 Etnk1Q9D4V0 363 aa17.95■□□□□ 0.46
Vcan-201ENSMUST00000109543 Dapk3O54784 448 aa17.94■□□□□ 0.46
Vcan-201ENSMUST00000109543 RdxP26043 583 aaKnown RBP17.94■□□□□ 0.46
Vcan-201ENSMUST00000109543 Arid5bQ8BM75 1188 aaKnown RBP17.94■□□□□ 0.46
Vcan-201ENSMUST00000109543 NsmfQ99NF2 532 aa17.94■□□□□ 0.46
Vcan-201ENSMUST00000109543 Cep89Q9CZX2 791 aa17.94■□□□□ 0.46
Vcan-201ENSMUST00000109543 Pik3ap1Q9EQ32 811 aa17.94■□□□□ 0.46
Vcan-201ENSMUST00000109543 PcQ05920 1178 aa17.94■□□□□ 0.46
Vcan-201ENSMUST00000109543 Prl2c1Q5SVL9 228 aa17.94■□□□□ 0.46
Vcan-201ENSMUST00000109543 Ctr9Q62018 1173 aaKnown RBP17.94■□□□□ 0.46
Vcan-201ENSMUST00000109543 Larp6Q8BN59 492 aa17.94■□□□□ 0.46
Vcan-201ENSMUST00000109543 Map3k15A2AQW0 1331 aa17.94■□□□□ 0.46
Vcan-201ENSMUST00000109543 Ampd3O08739 766 aa17.93■□□□□ 0.46
Vcan-201ENSMUST00000109543 Cdk4P30285 303 aa17.93■□□□□ 0.46
Vcan-201ENSMUST00000109543 TbcaP48428 108 aaKnown RBP17.93■□□□□ 0.46
Vcan-201ENSMUST00000109543 Zkscan4Q5SZT6 480 aa17.93■□□□□ 0.46
Vcan-201ENSMUST00000109543 Cdcp1Q5U462 833 aa17.93■□□□□ 0.46
Vcan-201ENSMUST00000109543 Znf653Q6YND2 615 aa17.93■□□□□ 0.46
Vcan-201ENSMUST00000109543 Emilin2Q8K482 1074 aa17.93■□□□□ 0.46
Vcan-201ENSMUST00000109543 Aox3G3X982 1335 aa17.93■□□□□ 0.46
Vcan-201ENSMUST00000109543 Zscan20B2KFW1 1030 aa17.93■□□□□ 0.46
Vcan-201ENSMUST00000109543 Myo1bP46735 1107 aa17.93■□□□□ 0.46
Vcan-201ENSMUST00000109543 RtcbQ99LF4 505 aaKnown RBP17.93■□□□□ 0.46
Vcan-201ENSMUST00000109543 Trim11Q99PQ2 467 aa17.93■□□□□ 0.46
Vcan-201ENSMUST00000109543 Ccdc39Q9D5Y1 937 aa17.93■□□□□ 0.46
Vcan-201ENSMUST00000109543 Tfcp2Q9ERA0 502 aa17.93■□□□□ 0.46
Vcan-201ENSMUST00000109543 Prr16A3KMN5 304 aa17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 InhbeO08717 350 aa17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Arhgef16Q3U5C8 713 aa17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Pus7lQ8CE46 702 aa17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Afg3l2Q8JZQ2 802 aaKnown RBP17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Serpina10Q8R121 448 aa17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Slc14a2Q8R4T9 930 aa17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Ltbp1Q8CG19 1712 aa17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Myh6Q02566 1938 aaKnown RBP17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Gpatch11Q3UFS4 262 aa17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Gm5592Q3V0A6 857 aa17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Slc27a1Q60714 646 aa17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Arid3aQ62431 601 aa17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Cep120Q7TSG1 988 aa17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Ccz1Q8C1Y8 480 aa17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Ints4Q8CIM8 964 aa17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Lrit1Q8K099 624 aa17.92■□□□□ 0.46
Vcan-201ENSMUST00000109543 Zfyve9A2A8R0 1397 aa17.91■□□□□ 0.46
Vcan-201ENSMUST00000109543 Oas2E9Q9A9 742 aa17.91■□□□□ 0.46
Vcan-201ENSMUST00000109543 Grin1P35438 938 aa17.91■□□□□ 0.46
Vcan-201ENSMUST00000109543 Lrrc8aQ80WG5 810 aa17.91■□□□□ 0.46
Vcan-201ENSMUST00000109543 QarsQ8BML9 775 aa17.91■□□□□ 0.46
Vcan-201ENSMUST00000109543 Kri1Q8VDQ9 704 aaKnown RBP17.91■□□□□ 0.46
Vcan-201ENSMUST00000109543 Ifi35Q9D8C4 286 aa17.91■□□□□ 0.46
Vcan-201ENSMUST00000109543 Kcnh3Q9WVJ0 1095 aa17.91■□□□□ 0.46
Vcan-201ENSMUST00000109543 Vnn1Q9Z0K8 512 aa17.91■□□□□ 0.46
Vcan-201ENSMUST00000109543 CoblQ5NBX1 1337 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms