RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Spata31d1bE9QA57 1361 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Krt12Q64291 487 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Cfap69Q8BH53 942 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Prr16A3KMN5 304 aa18.27■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Slc20a2Q80UP8 656 aa18.27■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ccdc28aQ8CEI3 192 aa18.27■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Q8CEZ4 452 aa18.27■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Nr1d1Q3UV55 615 aa18.27■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Prpf38aQ4FK66 312 aaKnown RBP18.27■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Soga3Q6NZL0 945 aa18.27■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ighmbp2P40694 993 aa18.27■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Rps6kb1Q8BSK8 525 aa18.27■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Fermt3Q8K1B8 665 aa18.27■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Zkscan3Q91VW9 553 aa18.27■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Rps6ka1P18653 724 aa18.27■□□□□ 0.51
Col17a1-202ENSMUST00000086923 S100bP50114 92 aa18.27■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Stmn1P54227 149 aaKnown RBP18.27■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Atg3Q9CPX6 314 aa18.27■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Actn2Q9JI91 894 aa18.27■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Snx1Q9WV80 522 aa18.27■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Top2aQ01320 1528 aaKnown RBP18.27■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Cetn1P41209 172 aa18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Nlrp4aQ8BU40 982 aa18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Stat2Q9WVL2 923 aa18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Iqca1lA6H690 825 aa18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Pde6bP23440 856 aa18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Gm136Q3V037 328 aa18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Slc10a4Q3UEZ8 437 aa18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Rbm19Q8R3C6 952 aaKnown RBP18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Pdrg1P59048 133 aa18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Tpp2Q64514 1262 aa18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Bfsp1A2AMT1 669 aa18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Gm10220K7N660 267 aa18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Nap1l2P51860 460 aa18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Nub1P54729 614 aa18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Mcm7Q61881 719 aaKnown RBP18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Ovgp1Q62010 721 aa18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 HdlbpQ8VDJ3 1268 aaKnown RBP18.26■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Pdha1P35486 390 aaKnown RBP18.25■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Gbp10Q000W5 611 aa18.25■□□□□ 0.51
Col17a1-202ENSMUST00000086923 TfrcQ62351 763 aaKnown RBP18.25■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Fbxo18Q8K2I9 1042 aa18.25■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Polr2dQ9D7M8 142 aaKnown RBP18.25■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Prdm16A2A935 1275 aa18.25■□□□□ 0.51
Col17a1-202ENSMUST00000086923 G3bp2P97379 482 aaKnown RBP18.25■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Ccpg1Q640L3 753 aa18.25■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Hs2st1Q8R3H7 356 aa18.25■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Klhdc4Q921I2 584 aa18.25■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Clcn6O35454 870 aa18.25■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Cnot6lQ8VEG6 555 aa18.25■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Vps36Q91XD6 386 aa18.25■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Gucy1b3O54865 620 aa18.24■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Tcp1P11983 556 aaKnown RBP18.24■□□□□ 0.51
Col17a1-202ENSMUST00000086923 ApobrQ8VBT6 942 aa18.24■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Pik3ap1Q9EQ32 811 aa18.24■□□□□ 0.51
Col17a1-202ENSMUST00000086923 PigoQ9JJI6 1093 aa18.24■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Pak1O88643 545 aa18.24■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Mdm2P23804 489 aa18.24■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Phf20l1Q8CCJ9 1013 aa18.24■□□□□ 0.51
Col17a1-202ENSMUST00000086923 A630010A05RikA9C473 232 aa18.24■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Trim34bJ3QNR8 485 aa18.24■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Gdap1O88741 358 aa18.24■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Trim17Q7TPM3 477 aa18.24■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Triml1Q8BVP1 470 aa18.24■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Rabep2Q91WG2 554 aa18.24■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Rtl9Q32KG4 1339 aa18.24■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Trpa1Q8BLA8 1125 aa18.23■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Epc1Q8C9X6 813 aa18.23■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Trpc3Q9QZC1 836 aa18.23■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Epb41l2O70318 988 aaKnown RBP18.23■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Map3k7Q62073 579 aa18.23■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Map2k2Q63932 401 aa18.23■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Gm2030D3Z7C4 212 aa18.23■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Trim80Q3V061 624 aa18.23■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Zbtb43Q9DAI4 467 aa18.23■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Taf4bG5E8Z2 855 aa18.23■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Nrg3O35181 713 aa18.23■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Tmem87bQ8BKU8 555 aa18.23■□□□□ 0.51
Col17a1-202ENSMUST00000086923 SdsQ8VBT2 327 aa18.23■□□□□ 0.51
Col17a1-202ENSMUST00000086923 WtapQ9ER69 396 aa18.23■□□□□ 0.51
Col17a1-202ENSMUST00000086923 XpcP51612 930 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Daam2Q80U19 1115 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Aldh1l2Q8K009 923 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Nek9Q8K1R7 984 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Wbp11Q923D5 641 aaKnown RBP18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Olr1Q9EQ09 363 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Znf394Q9Z1D9 521 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 E330017A01RikQ8BU47 192 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Vps33aQ9D2N9 598 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Efhd1Q9D4J1 240 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Cul3Q9JLV5 768 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 1700113H08RikE9Q9Q5 327 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Rapgef1Q3UHC1 1224 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Npdc1Q64322 332 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Slc26a7Q8R2Z3 656 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Spocd1B1ASB6 936 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Naif1Q6PFD7 327 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Ranbp6Q8BIV3 1105 aa18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Arid5bQ8BM75 1188 aaKnown RBP18.22■□□□□ 0.51
Col17a1-202ENSMUST00000086923 Ccz1Q8C1Y8 480 aa18.22■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms