RNA–Protein interactions for RNA: ENST00000397345.7

NEB-203, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-203ENST00000397345 PLCD3Q8N3E9 789 aa3.43□□□□□ -1.86
NEB-203ENST00000397345 LAS1LQ9Y4W2 734 aaKnown RBP3.43□□□□□ -1.86
NEB-203ENST00000397345 NCLP19338 710 aaKnown RBP3.42□□□□□ -1.86
NEB-203ENST00000397345 NPM1P06748 294 aaKnown RBP eCLIP3.42□□□□□ -1.86
NEB-203ENST00000397345 HSP90AA1P07900 732 aaKnown RBP3.42□□□□□ -1.86
NEB-203ENST00000397345 HSP90AA2PQ14568 343 aaPredicted RBP3.42□□□□□ -1.86
NEB-203ENST00000397345 DCAF1Q9Y4B6 1507 aa3.42□□□□□ -1.86
NEB-203ENST00000397345 ZBTB7CA1YPR0 619 aa3.42□□□□□ -1.86
NEB-203ENST00000397345 WWC1Q8IX03 1113 aa3.41□□□□□ -1.86
NEB-203ENST00000397345 PNNQ9H307 717 aaKnown RBP3.41□□□□□ -1.86
NEB-203ENST00000397345 ANP32BQ92688 251 aaKnown RBP3.41□□□□□ -1.86
NEB-203ENST00000397345 CHMP4CQ96CF2 233 aa3.41□□□□□ -1.86
NEB-203ENST00000397345 HDGFP51858 240 aaKnown RBP3.4□□□□□ -1.86
NEB-203ENST00000397345 NCBP3Q53F19 620 aaKnown RBP3.4□□□□□ -1.86
NEB-203ENST00000397345 AAMPQ13685 434 aa3.4□□□□□ -1.86
NEB-203ENST00000397345 TRHP20396 242 aaPredicted RBP3.4□□□□□ -1.87
NEB-203ENST00000397345 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.4□□□□□ -1.87
NEB-203ENST00000397345 TNNT2P45379 298 aaPredicted RBP3.4□□□□□ -1.87
NEB-203ENST00000397345 TULP1O00294 542 aaPredicted RBP3.4□□□□□ -1.87
NEB-203ENST00000397345 PTMSP20962 102 aa3.4□□□□□ -1.87
NEB-203ENST00000397345 HNRNPUL2Q1KMD3 747 aaKnown RBP3.4□□□□□ -1.87
NEB-203ENST00000397345 APPP05067 770 aa3.4□□□□□ -1.87
NEB-203ENST00000397345 C14orf37Q86TY3 774 aa3.39□□□□□ -1.87
NEB-203ENST00000397345 FBLN2P98095 1184 aa3.39□□□□□ -1.87
NEB-203ENST00000397345 HDAC5Q9UQL6 1122 aa3.39□□□□□ -1.87
NEB-203ENST00000397345 HMGB1P09429 215 aaKnown RBP3.39□□□□□ -1.87
NEB-203ENST00000397345 UBTFP17480 764 aaKnown RBP3.39□□□□□ -1.87
NEB-203ENST00000397345 MS4A1P11836 297 aa3.39□□□□□ -1.87
NEB-203ENST00000397345 ZNF326Q5BKZ1 582 aaKnown RBP3.39□□□□□ -1.87
NEB-203ENST00000397345 EEA1Q15075 1411 aa3.39□□□□□ -1.87
NEB-203ENST00000397345 SUPT16HQ9Y5B9 1047 aaKnown RBP3.38□□□□□ -1.87
NEB-203ENST00000397345 CDK11BP21127 795 aaKnown RBP3.38□□□□□ -1.87
NEB-203ENST00000397345 PATL2C9JE40 543 aaKnown RBP3.38□□□□□ -1.87
NEB-203ENST00000397345 ANP32AP39687 249 aaKnown RBP3.38□□□□□ -1.87
NEB-203ENST00000397345 UPF2Q9HAU5 1272 aaKnown RBP3.38□□□□□ -1.87
NEB-203ENST00000397345 SENP3-EIF4A1A0A087X0R7 540 aa3.38□□□□□ -1.87
NEB-203ENST00000397345 E9PSI1 815 aa3.38□□□□□ -1.87
NEB-203ENST00000397345 BBXQ8WY36 941 aaPredicted RBP3.37□□□□□ -1.87
NEB-203ENST00000397345 C11orf95C9JLR9 678 aaPredicted RBP3.37□□□□□ -1.87
NEB-203ENST00000397345 ANP32CO43423 234 aa3.36□□□□□ -1.87
NEB-203ENST00000397345 DNTTIP2Q5QJE6 756 aaKnown RBP3.36□□□□□ -1.87
NEB-203ENST00000397345 EIF3DO15371 548 aaKnown RBP eCLIP3.36□□□□□ -1.87
NEB-203ENST00000397345 FGD1P98174 961 aa3.36□□□□□ -1.87
NEB-203ENST00000397345 BRPF3Q9ULD4 1205 aa3.35□□□□□ -1.87
NEB-203ENST00000397345 RGS3P49796 1198 aa3.35□□□□□ -1.87
NEB-203ENST00000397345 NAP1L2Q9ULW6 460 aaPredicted RBP3.34□□□□□ -1.87
NEB-203ENST00000397345 CANXP27824 592 aaKnown RBP3.34□□□□□ -1.87
NEB-203ENST00000397345 TNNT3P45378 269 aaPredicted RBP3.34□□□□□ -1.87
NEB-203ENST00000397345 TRIM52Q96A61 297 aa3.34□□□□□ -1.88
NEB-203ENST00000397345 GZF1Q9H116 711 aaPredicted RBP3.34□□□□□ -1.88
NEB-203ENST00000397345 RSPH6AQ9H0K4 717 aa3.34□□□□□ -1.88
NEB-203ENST00000397345 ESF1Q9H501 851 aaKnown RBP3.33□□□□□ -1.88
NEB-203ENST00000397345 HIRIP3Q9BW71 556 aaPredicted RBP3.33□□□□□ -1.88
NEB-203ENST00000397345 DHX8Q14562 1220 aaKnown RBP3.33□□□□□ -1.88
NEB-203ENST00000397345 TRIM44Q96DX7 344 aaPredicted RBP3.33□□□□□ -1.88
NEB-203ENST00000397345 BAZ1BQ9UIG0 1483 aaKnown RBP3.33□□□□□ -1.88
NEB-203ENST00000397345 TAF7LQ5H9L4 462 aa3.33□□□□□ -1.88
NEB-203ENST00000397345 TPRNQ4KMQ1 711 aa3.33□□□□□ -1.88
NEB-203ENST00000397345 NOP58Q9Y2X3 529 aaKnown RBP3.33□□□□□ -1.88
NEB-203ENST00000397345 MYO15BQ96JP2 1530 aa3.32□□□□□ -1.88
NEB-203ENST00000397345 HMGB1P1B2RPK0 211 aaPredicted RBP3.32□□□□□ -1.88
NEB-203ENST00000397345 MSH5O43196 834 aa3.32□□□□□ -1.88
NEB-203ENST00000397345 DDRGK1Q96HY6 314 aa3.32□□□□□ -1.88
NEB-203ENST00000397345 TSPY4P0CV99 314 aa3.32□□□□□ -1.88
NEB-203ENST00000397345 TSPY10P0CW01 314 aa3.32□□□□□ -1.88
NEB-203ENST00000397345 CHIC1Q5VXU3 224 aa3.31□□□□□ -1.88
NEB-203ENST00000397345 L1TD1Q5T7N2 865 aaKnown RBP3.31□□□□□ -1.88
NEB-203ENST00000397345 HOXA7P31268 230 aaPredicted RBP3.31□□□□□ -1.88
NEB-203ENST00000397345 VGLL3A8MV65 326 aa3.31□□□□□ -1.88
NEB-203ENST00000397345 NRDCO43847 1150 aa3.31□□□□□ -1.88
NEB-203ENST00000397345 SPRYD3Q8NCJ5 442 aa3.31□□□□□ -1.88
NEB-203ENST00000397345 CERS3Q8IU89 383 aa3.31□□□□□ -1.88
NEB-203ENST00000397345 CCDC34Q96HJ3 373 aa3.31□□□□□ -1.88
NEB-203ENST00000397345 ISY1Q9ULR0 285 aaKnown RBP3.31□□□□□ -1.88
NEB-203ENST00000397345 WASHC2AQ641Q2 1341 aa3.3□□□□□ -1.88
NEB-203ENST00000397345 WASHC2CQ9Y4E1 1318 aa3.3□□□□□ -1.88
NEB-203ENST00000397345 AEBP1Q8IUX7 1158 aa3.3□□□□□ -1.88
NEB-203ENST00000397345 PDE3BQ13370 1112 aa3.3□□□□□ -1.88
NEB-203ENST00000397345 SLC4A3P48751 1232 aa3.3□□□□□ -1.88
NEB-203ENST00000397345 RBM25P49756 843 aaKnown RBP3.3□□□□□ -1.88
NEB-203ENST00000397345 PRDM10Q9NQV6 1147 aa3.3□□□□□ -1.88
NEB-203ENST00000397345 FAM13BQ9NYF5 915 aa3.29□□□□□ -1.88
NEB-203ENST00000397345 ZHX1Q9UKY1 873 aaPredicted RBP3.29□□□□□ -1.88
NEB-203ENST00000397345 GOLGA6L22H0YM25 854 aa3.29□□□□□ -1.88
NEB-203ENST00000397345 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.29□□□□□ -1.88
NEB-203ENST00000397345 EIF4G2P78344 907 aaKnown RBP eCLIP3.29□□□□□ -1.88
NEB-203ENST00000397345 ZFP91Q96JP5 570 aaPredicted RBP3.29□□□□□ -1.88
NEB-203ENST00000397345 CCDC180Q9P1Z9 1646 aa3.29□□□□□ -1.88
NEB-203ENST00000397345 RSF1Q96T23 1441 aaPredicted RBP3.29□□□□□ -1.88
NEB-203ENST00000397345 DDX10Q13206 875 aaKnown RBP3.29□□□□□ -1.88
NEB-203ENST00000397345 CALD1Q05682 793 aaKnown RBP3.28□□□□□ -1.88
NEB-203ENST00000397345 AKNAQ7Z591 1439 aa3.28□□□□□ -1.88
NEB-203ENST00000397345 BECN1Q14457 450 aa3.28□□□□□ -1.88
NEB-203ENST00000397345 B4GALNT3Q6L9W6 998 aa3.28□□□□□ -1.88
NEB-203ENST00000397345 PAK3O75914 559 aaPredicted RBP3.27□□□□□ -1.89
NEB-203ENST00000397345 MTERF4Q7Z6M4 381 aaKnown RBP3.27□□□□□ -1.89
NEB-203ENST00000397345 CCER2I3L3R5 266 aa3.27□□□□□ -1.89
NEB-203ENST00000397345 CHMP7Q8WUX9 453 aaPredicted RBP3.27□□□□□ -1.89
NEB-203ENST00000397345 CNPY4Q8N129 248 aa3.27□□□□□ -1.89
NEB-203ENST00000397345 KCNH8Q96L42 1107 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms