RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 NIT1Q86X76 327 aa12.11□□□□□ -0.47
PHGDH-230ENST00000641927 GTSF1LQ9H1H1 148 aa12.11□□□□□ -0.47
PHGDH-230ENST00000641927 TSHBP01222 138 aa12.1□□□□□ -0.47
PHGDH-230ENST00000641927 LINC00614P0C842 121 aa12.1□□□□□ -0.47
PHGDH-230ENST00000641927 LYPD5Q6UWN5 251 aa12.09□□□□□ -0.47
PHGDH-230ENST00000641927 AMTP48728 403 aa12.08□□□□□ -0.48
PHGDH-230ENST00000641927 NTM-AS1Q6ZSK4 140 aa12.08□□□□□ -0.48
PHGDH-230ENST00000641927 AP5S1Q9NUS5 200 aa12.08□□□□□ -0.48
PHGDH-230ENST00000641927 APLNQ9ULZ1 77 aa12.08□□□□□ -0.48
PHGDH-230ENST00000641927 TRBV6-8A0A0A6YYG3 113 aa12.07□□□□□ -0.48
PHGDH-230ENST00000641927 LAGE3Q14657 143 aa12.07□□□□□ -0.48
PHGDH-230ENST00000641927 TMEM97Q5BJF2 176 aa12.07□□□□□ -0.48
PHGDH-230ENST00000641927 URB1-AS1Q96HZ7 61 aa12.07□□□□□ -0.48
PHGDH-230ENST00000641927 CSMD3Q7Z407 3707 aa12.07□□□□□ -0.48
PHGDH-230ENST00000641927 TRBV25-1A0A075B6N4 114 aa12.06□□□□□ -0.48
PHGDH-230ENST00000641927 IGHV1-24A0A0C4DH33 117 aa12.06□□□□□ -0.48
PHGDH-230ENST00000641927 SERF1AO75920 110 aa12.06□□□□□ -0.48
PHGDH-230ENST00000641927 ESRGQ1W209 222 aa12.06□□□□□ -0.48
PHGDH-230ENST00000641927 TCTAP57738 103 aa12.06□□□□□ -0.48
PHGDH-230ENST00000641927 ORMDL2Q53FV1 153 aa12.06□□□□□ -0.48
PHGDH-230ENST00000641927 HIST3H2BBQ8N257 126 aa12.06□□□□□ -0.48
PHGDH-230ENST00000641927 CHCHD1Q96BP2 118 aaKnown RBP12.06□□□□□ -0.48
PHGDH-230ENST00000641927 K7EMI3 77 aa12.05□□□□□ -0.48
PHGDH-230ENST00000641927 HSBP1O75506 76 aa12.05□□□□□ -0.48
PHGDH-230ENST00000641927 CCL18P55774 89 aa12.05□□□□□ -0.48
PHGDH-230ENST00000641927 CHCHD5Q9BSY4 110 aa12.05□□□□□ -0.48
PHGDH-230ENST00000641927 BTF3P20290 206 aaKnown RBP12.04□□□□□ -0.48
PHGDH-230ENST00000641927 PMCHL1Q16048 86 aa12.04□□□□□ -0.48
PHGDH-230ENST00000641927 LELP1Q5T871 98 aa12.04□□□□□ -0.48
PHGDH-230ENST00000641927 TMEM243Q9BU79 118 aa12.04□□□□□ -0.48
PHGDH-230ENST00000641927 DYNC2H1Q8NCM8 4307 aaKnown RBP12.04□□□□□ -0.48
PHGDH-230ENST00000641927 UBE2L6O14933 153 aa12.03□□□□□ -0.48
PHGDH-230ENST00000641927 S100A2P29034 98 aa12.03□□□□□ -0.48
PHGDH-230ENST00000641927 LINC00310P59036 64 aa12.03□□□□□ -0.48
PHGDH-230ENST00000641927 CHCHD7Q9BUK0 85 aa12.03□□□□□ -0.48
PHGDH-230ENST00000641927 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-230ENST00000641927 IGKV2-29A2NJV5 120 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-230ENST00000641927 LINC01546A6NGU7 62 aa12.03□□□□□ -0.48
PHGDH-230ENST00000641927 C3orf84H3BNL1 204 aa12.03□□□□□ -0.48
PHGDH-230ENST00000641927 NUPR1O60356 82 aa12.03□□□□□ -0.48
PHGDH-230ENST00000641927 TIRAPP58753 221 aa12.03□□□□□ -0.48
PHGDH-230ENST00000641927 PDZD11Q5EBL8 140 aa12.03□□□□□ -0.48
PHGDH-230ENST00000641927 CASC10Q5T4H9 136 aa12.03□□□□□ -0.48
PHGDH-230ENST00000641927 STARD9Q9P2P6 4700 aa12.03□□□□□ -0.48
PHGDH-230ENST00000641927 TRAV8-6A0A0B4J262 113 aa12.02□□□□□ -0.49
PHGDH-230ENST00000641927 ESDP10768 282 aa12.02□□□□□ -0.49
PHGDH-230ENST00000641927 UBE2DNLQ8IWF7 75 aa12.01□□□□□ -0.49
PHGDH-230ENST00000641927 LINC00518Q8N0U6 118 aa12.01□□□□□ -0.49
PHGDH-230ENST00000641927 FAM19A2Q8N3H0 131 aa12.01□□□□□ -0.49
PHGDH-230ENST00000641927 C20orf203Q8NBC4 194 aa12.01□□□□□ -0.49
PHGDH-230ENST00000641927 LINC00588Q9Y4M8 146 aa12.01□□□□□ -0.49
PHGDH-230ENST00000641927 IFITM10A6NMD0 228 aa12□□□□□ -0.49
PHGDH-230ENST00000641927 TMEM262E9PQX1 116 aa12□□□□□ -0.49
PHGDH-230ENST00000641927 RPL39P62891 51 aaKnown RBP12□□□□□ -0.49
PHGDH-230ENST00000641927 GAGE6Q13070 117 aa12□□□□□ -0.49
PHGDH-230ENST00000641927 TMEM18Q96B42 140 aa12□□□□□ -0.49
PHGDH-230ENST00000641927 CYSLTR1Q9Y271 337 aa12□□□□□ -0.49
PHGDH-230ENST00000641927 G0S2P27469 103 aa12□□□□□ -0.49
PHGDH-230ENST00000641927 C2orf66Q6UXQ4 117 aa12□□□□□ -0.49
PHGDH-230ENST00000641927 HBDP02042 147 aa11.99□□□□□ -0.49
PHGDH-230ENST00000641927 HIST1H2BLQ99880 126 aa11.99□□□□□ -0.49
PHGDH-230ENST00000641927 FABP4P15090 132 aa11.98□□□□□ -0.49
PHGDH-230ENST00000641927 AKR1D1P51857 326 aa11.98□□□□□ -0.49
PHGDH-230ENST00000641927 AMMECR1LQ6DCA0 310 aa11.98□□□□□ -0.49
PHGDH-230ENST00000641927 WFDC10BQ8IUB3 73 aa11.98□□□□□ -0.49
PHGDH-230ENST00000641927 MRPS16Q9Y3D3 137 aaKnown RBP11.98□□□□□ -0.49
PHGDH-230ENST00000641927 TENM2Q9NT68 2774 aa11.97□□□□□ -0.49
PHGDH-230ENST00000641927 A0A096LNJ9 63 aa11.97□□□□□ -0.49
PHGDH-230ENST00000641927 FGF6P10767 208 aa11.97□□□□□ -0.49
PHGDH-230ENST00000641927 TOMM6Q96B49 74 aa11.97□□□□□ -0.49
PHGDH-230ENST00000641927 A0A087WX48 190 aa11.96□□□□□ -0.5
PHGDH-230ENST00000641927 H7C423 109 aa11.96□□□□□ -0.5
PHGDH-230ENST00000641927 DGAT2L7PQ6IED9 249 aa11.96□□□□□ -0.5
PHGDH-230ENST00000641927 PLECQ15149 4684 aaKnown RBP11.95□□□□□ -0.5
PHGDH-230ENST00000641927 PACRGQ96M98 296 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-230ENST00000641927 SCGB3A1Q96QR1 104 aa11.95□□□□□ -0.5
PHGDH-230ENST00000641927 UBE2D4Q9Y2X8 147 aa11.95□□□□□ -0.5
PHGDH-230ENST00000641927 PKIAP61925 76 aa11.94□□□□□ -0.5
PHGDH-230ENST00000641927 SMAGPQ0VAQ4 97 aa11.94□□□□□ -0.5
PHGDH-230ENST00000641927 MPV17L2Q567V2 206 aa11.94□□□□□ -0.5
PHGDH-230ENST00000641927 Q8N3U1 123 aa11.94□□□□□ -0.5
PHGDH-230ENST00000641927 IGHV3-30P01768 117 aa11.94□□□□□ -0.5
PHGDH-230ENST00000641927 IGHV3-33P01772 117 aa11.94□□□□□ -0.5
PHGDH-230ENST00000641927 IGHV3-30-3P0DP02 117 aa11.94□□□□□ -0.5
PHGDH-230ENST00000641927 IGHV3-30-5P0DP03 117 aa11.94□□□□□ -0.5
PHGDH-230ENST00000641927 Q8N976 141 aa11.94□□□□□ -0.5
PHGDH-230ENST00000641927 OR10D4PQ8NGN7 298 aa11.94□□□□□ -0.5
PHGDH-230ENST00000641927 TMEM101Q96IK0 257 aa11.94□□□□□ -0.5
PHGDH-230ENST00000641927 LINC01549A6NIU2 74 aa11.93□□□□□ -0.5
PHGDH-230ENST00000641927 SIVA1O15304 175 aa11.93□□□□□ -0.5
PHGDH-230ENST00000641927 RBX1P62877 108 aa11.93□□□□□ -0.5
PHGDH-230ENST00000641927 OR5A1Q8NGJ0 315 aa11.93□□□□□ -0.5
PHGDH-230ENST00000641927 UPK3BQ9BT76 320 aa11.93□□□□□ -0.5
PHGDH-230ENST00000641927 SPANXA1Q9NS26 97 aa11.93□□□□□ -0.5
PHGDH-230ENST00000641927 LYSTQ99698 3801 aa11.92□□□□□ -0.5
PHGDH-230ENST00000641927 LEPROTL1O95214 131 aa11.92□□□□□ -0.5
PHGDH-230ENST00000641927 ERASQ7Z444 233 aa11.92□□□□□ -0.5
PHGDH-230ENST00000641927 MRPL52Q86TS9 123 aaKnown RBP11.92□□□□□ -0.5
PHGDH-230ENST00000641927 ZNF25P17030 456 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-230ENST00000641927 OPRPNQ99935 248 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms