RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 ICOSQ9Y6W8 199 aa14.41□□□□□ -0.1
SCARB2-219ENST00000639738 SNRPEP62304 92 aaKnown RBP14.4□□□□□ -0.1
SCARB2-219ENST00000639738 LAGE3Q14657 143 aa14.4□□□□□ -0.1
SCARB2-219ENST00000639738 KIR2DL4Q99706 377 aa14.39□□□□□ -0.11
SCARB2-219ENST00000639738 CHCHD7Q9BUK0 85 aa14.39□□□□□ -0.11
SCARB2-219ENST00000639738 GTSF1LQ9H1H1 148 aa14.39□□□□□ -0.11
SCARB2-219ENST00000639738 STARD9Q9P2P6 4700 aa14.37□□□□□ -0.11
SCARB2-219ENST00000639738 PMCHL1Q16048 86 aa14.37□□□□□ -0.11
SCARB2-219ENST00000639738 CEMP1Q6PRD7 247 aaPredicted RBP14.37□□□□□ -0.11
SCARB2-219ENST00000639738 HIST3H2BBQ8N257 126 aa14.37□□□□□ -0.11
SCARB2-219ENST00000639738 IGHV1-24A0A0C4DH33 117 aa14.36□□□□□ -0.11
SCARB2-219ENST00000639738 IFITM10A6NMD0 228 aa14.36□□□□□ -0.11
SCARB2-219ENST00000639738 S100A6P06703 90 aa14.36□□□□□ -0.11
SCARB2-219ENST00000639738 COTL1Q14019 142 aa14.36□□□□□ -0.11
SCARB2-219ENST00000639738 SH2D6Q7Z4S9 175 aa14.36□□□□□ -0.11
SCARB2-219ENST00000639738 FAM19A2Q8N3H0 131 aa14.36□□□□□ -0.11
SCARB2-219ENST00000639738 PLECQ15149 4684 aaKnown RBP14.36□□□□□ -0.11
SCARB2-219ENST00000639738 FCER1GP30273 86 aa14.36□□□□□ -0.11
SCARB2-219ENST00000639738 ORMDL2Q53FV1 153 aa14.36□□□□□ -0.11
SCARB2-219ENST00000639738 TRBV6-8A0A0A6YYG3 113 aa14.35□□□□□ -0.11
SCARB2-219ENST00000639738 HSBP1O75506 76 aa14.35□□□□□ -0.11
SCARB2-219ENST00000639738 NUDT3O95989 172 aa14.35□□□□□ -0.11
SCARB2-219ENST00000639738 TIRAPP58753 221 aa14.35□□□□□ -0.11
SCARB2-219ENST00000639738 LYPD5Q6UWN5 251 aa14.35□□□□□ -0.11
SCARB2-219ENST00000639738 C15orf53Q8NAA6 179 aa14.35□□□□□ -0.11
SCARB2-219ENST00000639738 IGLL5B9A064 214 aa14.34□□□□□ -0.11
SCARB2-219ENST00000639738 C20orf203Q8NBC4 194 aa14.34□□□□□ -0.11
SCARB2-219ENST00000639738 ESRGQ1W209 222 aa14.32□□□□□ -0.12
SCARB2-219ENST00000639738 TMEM97Q5BJF2 176 aa14.32□□□□□ -0.12
SCARB2-219ENST00000639738 PDZD11Q5EBL8 140 aa14.32□□□□□ -0.12
SCARB2-219ENST00000639738 APLNQ9ULZ1 77 aa14.32□□□□□ -0.12
SCARB2-219ENST00000639738 TENM2Q9NT68 2774 aa14.32□□□□□ -0.12
SCARB2-219ENST00000639738 RPL39P62891 51 aaKnown RBP14.31□□□□□ -0.12
SCARB2-219ENST00000639738 NUPR2A6NF83 97 aa14.31□□□□□ -0.12
SCARB2-219ENST00000639738 HBDP02042 147 aa14.31□□□□□ -0.12
SCARB2-219ENST00000639738 AMTP48728 403 aa14.31□□□□□ -0.12
SCARB2-219ENST00000639738 TOMM6Q96B49 74 aa14.31□□□□□ -0.12
SCARB2-219ENST00000639738 PACRGQ96M98 296 aaPredicted RBP14.31□□□□□ -0.12
SCARB2-219ENST00000639738 C2orf66Q6UXQ4 117 aa14.3□□□□□ -0.12
SCARB2-219ENST00000639738 FAM104AQ969W3 186 aa14.3□□□□□ -0.12
SCARB2-219ENST00000639738 RYR3Q15413 4870 aa14.3□□□□□ -0.12
SCARB2-219ENST00000639738 HIST1H2BLQ99880 126 aa14.29□□□□□ -0.12
SCARB2-219ENST00000639738 TRBV25-1A0A075B6N4 114 aa14.28□□□□□ -0.12
SCARB2-219ENST00000639738 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.28□□□□□ -0.12
SCARB2-219ENST00000639738 IGKV2-29A2NJV5 120 aaPredicted RBP14.28□□□□□ -0.12
SCARB2-219ENST00000639738 BTF3P20290 206 aaKnown RBP14.28□□□□□ -0.12
SCARB2-219ENST00000639738 LELP1Q5T871 98 aa14.28□□□□□ -0.12
SCARB2-219ENST00000639738 LINC00173Q6ZV60 143 aa14.28□□□□□ -0.12
SCARB2-219ENST00000639738 TMEM243Q9BU79 118 aa14.28□□□□□ -0.12
SCARB2-219ENST00000639738 IGIPA6NJ69 53 aa14.27□□□□□ -0.12
SCARB2-219ENST00000639738 MUC7Q8TAX7 377 aa14.27□□□□□ -0.12
SCARB2-219ENST00000639738 CYSLTR1Q9Y271 337 aa14.27□□□□□ -0.12
SCARB2-219ENST00000639738 C3orf84H3BNL1 204 aa14.25□□□□□ -0.13
SCARB2-219ENST00000639738 G0S2P27469 103 aa14.25□□□□□ -0.13
SCARB2-219ENST00000639738 UBE2D4Q9Y2X8 147 aa14.25□□□□□ -0.13
SCARB2-219ENST00000639738 KLK5Q9Y337 293 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-219ENST00000639738 H7C423 109 aa14.25□□□□□ -0.13
SCARB2-219ENST00000639738 MRPL52Q86TS9 123 aaKnown RBP14.25□□□□□ -0.13
SCARB2-219ENST00000639738 TIMM21Q9BVV7 248 aa14.25□□□□□ -0.13
SCARB2-219ENST00000639738 PYGO1Q9Y3Y4 419 aa14.25□□□□□ -0.13
SCARB2-219ENST00000639738 ZFAND6Q6FIF0 208 aa14.24□□□□□ -0.13
SCARB2-219ENST00000639738 TMEM18Q96B42 140 aa14.24□□□□□ -0.13
SCARB2-219ENST00000639738 LINC00588Q9Y4M8 146 aa14.24□□□□□ -0.13
SCARB2-219ENST00000639738 LEPROTL1O95214 131 aa14.23□□□□□ -0.13
SCARB2-219ENST00000639738 FABP4P15090 132 aa14.23□□□□□ -0.13
SCARB2-219ENST00000639738 TCTAP57738 103 aa14.23□□□□□ -0.13
SCARB2-219ENST00000639738 ERASQ7Z444 233 aa14.23□□□□□ -0.13
SCARB2-219ENST00000639738 LINC01549A6NIU2 74 aa14.22□□□□□ -0.13
SCARB2-219ENST00000639738 FGF6P10767 208 aa14.22□□□□□ -0.13
SCARB2-219ENST00000639738 GAGE6Q13070 117 aa14.22□□□□□ -0.13
SCARB2-219ENST00000639738 CHCHD5Q9BSY4 110 aa14.22□□□□□ -0.13
SCARB2-219ENST00000639738 LYSTQ99698 3801 aa14.22□□□□□ -0.13
SCARB2-219ENST00000639738 VPS13DQ5THJ4 4388 aa14.21□□□□□ -0.13
SCARB2-219ENST00000639738 S100A2P29034 98 aa14.21□□□□□ -0.13
SCARB2-219ENST00000639738 SCGB3A1Q96QR1 104 aa14.21□□□□□ -0.13
SCARB2-219ENST00000639738 TIMM17AQ99595 171 aa14.21□□□□□ -0.13
SCARB2-219ENST00000639738 OPRPNQ99935 248 aaPredicted RBP14.21□□□□□ -0.13
SCARB2-219ENST00000639738 CSDC2Q9Y534 153 aaKnown RBP14.21□□□□□ -0.13
SCARB2-219ENST00000639738 SPANXA1Q9NS26 97 aa14.2□□□□□ -0.14
SCARB2-219ENST00000639738 MRPS16Q9Y3D3 137 aaKnown RBP14.2□□□□□ -0.14
SCARB2-219ENST00000639738 DNAH1Q9P2D7 4330 aa14.2□□□□□ -0.14
SCARB2-219ENST00000639738 CASC10Q5T4H9 136 aa14.2□□□□□ -0.14
SCARB2-219ENST00000639738 WFDC10BQ8IUB3 73 aa14.2□□□□□ -0.14
SCARB2-219ENST00000639738 Q8N3U1 123 aa14.2□□□□□ -0.14
SCARB2-219ENST00000639738 IGLV4-3A0A075B6K6 122 aa14.19□□□□□ -0.14
SCARB2-219ENST00000639738 A0A1B0GUV1 79 aa14.19□□□□□ -0.14
SCARB2-219ENST00000639738 IFI27L1Q96BM0 104 aa14.19□□□□□ -0.14
SCARB2-219ENST00000639738 IGLV4-60A0A075B6I1 120 aa14.18□□□□□ -0.14
SCARB2-219ENST00000639738 LOC105371267A0A1B0GV96 52 aa14.18□□□□□ -0.14
SCARB2-219ENST00000639738 ATP5LO75964 103 aa14.18□□□□□ -0.14
SCARB2-219ENST00000639738 NPSP0C0P6 89 aa14.18□□□□□ -0.14
SCARB2-219ENST00000639738 MRPS36P82909 103 aaKnown RBP14.18□□□□□ -0.14
SCARB2-219ENST00000639738 MPV17L2Q567V2 206 aa14.18□□□□□ -0.14
SCARB2-219ENST00000639738 TMEM141Q96I45 108 aa14.18□□□□□ -0.14
SCARB2-219ENST00000639738 UPK3BQ9BT76 320 aa14.18□□□□□ -0.14
SCARB2-219ENST00000639738 HSPB8Q9UJY1 196 aa14.18□□□□□ -0.14
SCARB2-219ENST00000639738 TRAV8-6A0A0B4J262 113 aa14.17□□□□□ -0.14
SCARB2-219ENST00000639738 UBE2L6O14933 153 aa14.17□□□□□ -0.14
SCARB2-219ENST00000639738 CCL18P55774 89 aa14.17□□□□□ -0.14
SCARB2-219ENST00000639738 RBX1P62877 108 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms