RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 H7C1H1 209 aa10.58□□□□□ -0.72
COLCA2-207ENST00000639470 REG3AQ06141 175 aa10.58□□□□□ -0.72
COLCA2-207ENST00000639470 TMEM97Q5BJF2 176 aa10.58□□□□□ -0.72
COLCA2-207ENST00000639470 CNFNQ9BYD5 112 aa10.58□□□□□ -0.72
COLCA2-207ENST00000639470 PGLYRP4Q96LB8 373 aa10.57□□□□□ -0.72
COLCA2-207ENST00000639470 BIN3Q9NQY0 253 aa10.57□□□□□ -0.72
COLCA2-207ENST00000639470 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.57□□□□□ -0.72
COLCA2-207ENST00000639470 AMTP48728 403 aa10.56□□□□□ -0.72
COLCA2-207ENST00000639470 LYPD6BQ8NI32 183 aa10.56□□□□□ -0.72
COLCA2-207ENST00000639470 IGKV3OR2-268A0A0C4DH90 116 aa10.55□□□□□ -0.72
COLCA2-207ENST00000639470 GATCO43716 136 aaKnown RBP10.55□□□□□ -0.72
COLCA2-207ENST00000639470 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.54□□□□□ -0.72
COLCA2-207ENST00000639470 IGKV2-29A2NJV5 120 aaPredicted RBP10.54□□□□□ -0.72
COLCA2-207ENST00000639470 TMEM250H0YL14 139 aa10.54□□□□□ -0.72
COLCA2-207ENST00000639470 SLPIP03973 132 aa10.54□□□□□ -0.72
COLCA2-207ENST00000639470 PLA2G1BP04054 148 aaKnown RBP10.54□□□□□ -0.72
COLCA2-207ENST00000639470 TAGLN2P37802 199 aaKnown RBP10.54□□□□□ -0.72
COLCA2-207ENST00000639470 PKIAP61925 76 aa10.54□□□□□ -0.72
COLCA2-207ENST00000639470 BLOC1S1P78537 153 aa10.54□□□□□ -0.72
COLCA2-207ENST00000639470 COTL1Q14019 142 aa10.54□□□□□ -0.72
COLCA2-207ENST00000639470 C14orf177Q52M58 125 aa10.54□□□□□ -0.72
COLCA2-207ENST00000639470 WDR73Q6P4I2 378 aa10.54□□□□□ -0.72
COLCA2-207ENST00000639470 A0A1B0GUV1 79 aa10.51□□□□□ -0.73
COLCA2-207ENST00000639470 HNRNPA3P51991 378 aaKnown RBP10.51□□□□□ -0.73
COLCA2-207ENST00000639470 FAM231DQ6ZW35 169 aa10.51□□□□□ -0.73
COLCA2-207ENST00000639470 LINC01551Q86U37 167 aa10.51□□□□□ -0.73
COLCA2-207ENST00000639470 C9orf163Q8N9P6 203 aa10.51□□□□□ -0.73
COLCA2-207ENST00000639470 SMIM7Q9BQ49 75 aa10.51□□□□□ -0.73
COLCA2-207ENST00000639470 EIF5A2Q9GZV4 153 aaKnown RBP10.51□□□□□ -0.73
COLCA2-207ENST00000639470 hDV102S1A0JD36 115 aa10.5□□□□□ -0.73
COLCA2-207ENST00000639470 C9JQL5 133 aa10.5□□□□□ -0.73
COLCA2-207ENST00000639470 UBE2L6O14933 153 aa10.5□□□□□ -0.73
COLCA2-207ENST00000639470 SRP19P09132 144 aaKnown RBP10.5□□□□□ -0.73
COLCA2-207ENST00000639470 CHTF8P0CG12 524 aa10.5□□□□□ -0.73
COLCA2-207ENST00000639470 SDIM1Q6ZPB5 146 aa10.5□□□□□ -0.73
COLCA2-207ENST00000639470 FAM231BA6NCW3 169 aa10.49□□□□□ -0.73
COLCA2-207ENST00000639470 GAGE12HA6NDE8 117 aa10.49□□□□□ -0.73
COLCA2-207ENST00000639470 SDHAF1A6NFY7 115 aa10.49□□□□□ -0.73
COLCA2-207ENST00000639470 J3QL48 77 aa10.49□□□□□ -0.73
COLCA2-207ENST00000639470 RPS10P46783 165 aaKnown RBP10.49□□□□□ -0.73
COLCA2-207ENST00000639470 C15orf56Q8N910 161 aa10.49□□□□□ -0.73
COLCA2-207ENST00000639470 RNF185Q96GF1 192 aa10.49□□□□□ -0.73
COLCA2-207ENST00000639470 FAM210AQ96ND0 272 aa10.49□□□□□ -0.73
COLCA2-207ENST00000639470 A8MWL6 223 aa10.48□□□□□ -0.73
COLCA2-207ENST00000639470 SMKR1H3BMG3 65 aa10.48□□□□□ -0.73
COLCA2-207ENST00000639470 HIGD2BQ4VC39 106 aa10.48□□□□□ -0.73
COLCA2-207ENST00000639470 ZNF727A8MUV8 499 aa10.47□□□□□ -0.73
COLCA2-207ENST00000639470 HIGD1CA8MV81 97 aa10.47□□□□□ -0.73
COLCA2-207ENST00000639470 NCR2O95944 276 aa10.47□□□□□ -0.73
COLCA2-207ENST00000639470 SRSF3P84103 164 aaKnown RBP10.47□□□□□ -0.73
COLCA2-207ENST00000639470 DGAT2L7PQ6IED9 249 aa10.47□□□□□ -0.73
COLCA2-207ENST00000639470 RNASEKQ6P5S7 137 aaKnown RBP10.47□□□□□ -0.73
COLCA2-207ENST00000639470 TMEM242Q9NWH2 141 aa10.47□□□□□ -0.73
COLCA2-207ENST00000639470 TRAV8-4A0A0B4J246 113 aa10.46□□□□□ -0.73
COLCA2-207ENST00000639470 TSHBP01222 138 aa10.46□□□□□ -0.73
COLCA2-207ENST00000639470 FGF6P10767 208 aa10.46□□□□□ -0.73
COLCA2-207ENST00000639470 TEX261Q6UWH6 196 aa10.46□□□□□ -0.73
COLCA2-207ENST00000639470 AMN1Q8IY45 258 aa10.46□□□□□ -0.73
COLCA2-207ENST00000639470 KRTAP29-1A8MX34 341 aaPredicted RBP10.45□□□□□ -0.74
COLCA2-207ENST00000639470 APCSP02743 223 aa10.45□□□□□ -0.74
COLCA2-207ENST00000639470 RPL37AP61513 92 aaKnown RBP10.45□□□□□ -0.74
COLCA2-207ENST00000639470 CT83Q5H943 113 aa10.45□□□□□ -0.74
COLCA2-207ENST00000639470 AMMECR1LQ6DCA0 310 aa10.45□□□□□ -0.74
COLCA2-207ENST00000639470 SMIM15Q7Z3B0 74 aa10.45□□□□□ -0.74
COLCA2-207ENST00000639470 TSKUQ8WUA8 353 aa10.45□□□□□ -0.74
COLCA2-207ENST00000639470 V9GYV3 84 aa10.45□□□□□ -0.74
COLCA2-207ENST00000639470 PMCHP20382 165 aa10.44□□□□□ -0.74
COLCA2-207ENST00000639470 CNBPP62633 177 aaKnown RBP10.44□□□□□ -0.74
COLCA2-207ENST00000639470 CHCHD10Q8WYQ3 142 aaPredicted RBP10.44□□□□□ -0.74
COLCA2-207ENST00000639470 LRP1Q07954 4544 aaKnown RBP10.43□□□□□ -0.74
COLCA2-207ENST00000639470 TRBV6-5A0A0K0K1A5 114 aa10.43□□□□□ -0.74
COLCA2-207ENST00000639470 A0A1B0GUT8 65 aa10.43□□□□□ -0.74
COLCA2-207ENST00000639470 RAB4AP20338 218 aa10.43□□□□□ -0.74
COLCA2-207ENST00000639470 CLRN3Q8NCR9 226 aa10.43□□□□□ -0.74
COLCA2-207ENST00000639470 LINC00526Q96FQ7 95 aa10.43□□□□□ -0.74
COLCA2-207ENST00000639470 OSTCQ9NRP0 149 aa10.43□□□□□ -0.74
COLCA2-207ENST00000639470 I3L3M4 83 aa10.42□□□□□ -0.74
COLCA2-207ENST00000639470 ESDP10768 282 aa10.42□□□□□ -0.74
COLCA2-207ENST00000639470 RPL23P62829 140 aaKnown RBP10.42□□□□□ -0.74
COLCA2-207ENST00000639470 FOXI1Q12951 378 aa10.42□□□□□ -0.74
COLCA2-207ENST00000639470 NUP35Q8NFH5 326 aa10.42□□□□□ -0.74
COLCA2-207ENST00000639470 ISOC2Q96AB3 205 aa10.42□□□□□ -0.74
COLCA2-207ENST00000639470 TMEM191AQ9H0A3 160 aa10.42□□□□□ -0.74
COLCA2-207ENST00000639470 XCL1P47992 114 aa10.41□□□□□ -0.74
COLCA2-207ENST00000639470 BORCS7Q96B45 105 aa10.41□□□□□ -0.74
COLCA2-207ENST00000639470 ST20Q9HBF5 79 aa10.41□□□□□ -0.74
COLCA2-207ENST00000639470 IGHV3-64A0A075B6Q5 118 aa10.4□□□□□ -0.74
COLCA2-207ENST00000639470 POLR2KP53803 58 aaKnown RBP10.4□□□□□ -0.74
COLCA2-207ENST00000639470 CIRBPQ14011 172 aaKnown RBP10.4□□□□□ -0.74
COLCA2-207ENST00000639470 PRSS3P2Q8NHM4 247 aa10.4□□□□□ -0.74
COLCA2-207ENST00000639470 A0A087WYN8 130 aa10.39□□□□□ -0.75
COLCA2-207ENST00000639470 CCL25O15444 150 aa10.39□□□□□ -0.75
COLCA2-207ENST00000639470 ADIRFQ15847 76 aa10.39□□□□□ -0.75
COLCA2-207ENST00000639470 RNASE13Q5GAN3 156 aaKnown RBP10.39□□□□□ -0.75
COLCA2-207ENST00000639470 NRACQ8N912 160 aa10.39□□□□□ -0.75
COLCA2-207ENST00000639470 SPACA4Q8TDM5 124 aa10.39□□□□□ -0.75
COLCA2-207ENST00000639470 AP5S1Q9NUS5 200 aa10.39□□□□□ -0.75
COLCA2-207ENST00000639470 LINC00959A0A1B0GUT2 108 aa10.38□□□□□ -0.75
COLCA2-207ENST00000639470 COX6A2Q02221 97 aa10.38□□□□□ -0.75
COLCA2-207ENST00000639470 TMEM241Q24JQ0 296 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms