RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	PEX7	O00628	323 aa		7.06	□□□□□ -1.28
PAX6-238	ENST00000638755	H2AFB1	P0C5Y9	115 aa		7.06	□□□□□ -1.28
PAX6-238	ENST00000638755	SULT1A2	P50226	295 aa		7.06	□□□□□ -1.28
PAX6-238	ENST00000638755	SAPCD1	Q5SSQ6	148 aa		7.06	□□□□□ -1.28
PAX6-238	ENST00000638755	CST9LP1	Q5W188	147 aa		7.06	□□□□□ -1.28
PAX6-238	ENST00000638755	IGHV1-24	A0A0C4DH33	117 aa		7.05	□□□□□ -1.28
PAX6-238	ENST00000638755	IGKV3OR2-268	A0A0C4DH90	116 aa		7.05	□□□□□ -1.28
PAX6-238	ENST00000638755	KRBOX1	C9JBD0	128 aa		7.05	□□□□□ -1.28
PAX6-238	ENST00000638755	TSPAN13	O95857	204 aa		7.05	□□□□□ -1.28
PAX6-238	ENST00000638755	DNLZ	Q5SXM8	178 aa		7.05	□□□□□ -1.28
PAX6-238	ENST00000638755	PRR27	Q6MZM9	219 aa		7.05	□□□□□ -1.28
PAX6-238	ENST00000638755	ZFP82	Q8N141	532 aa		7.05	□□□□□ -1.28
PAX6-238	ENST00000638755	MUC17	Q685J3	4493 aa		7.04	□□□□□ -1.28
PAX6-238	ENST00000638755	TMSB15B	A0A087X1C1	80 aa		7.04	□□□□□ -1.28
PAX6-238	ENST00000638755	TRAV1-1	A0A0B4J248	108 aa		7.04	□□□□□ -1.28
PAX6-238	ENST00000638755		F5H697	171 aa		7.04	□□□□□ -1.28
PAX6-238	ENST00000638755	UBE2D1	P51668	147 aa		7.04	□□□□□ -1.28
PAX6-238	ENST00000638755	IQCJ	Q1A5X6	159 aa		7.04	□□□□□ -1.28
PAX6-238	ENST00000638755	ALKAL2	Q6UX46	152 aa		7.04	□□□□□ -1.28
PAX6-238	ENST00000638755	PKIG	Q9Y2B9	76 aa		7.04	□□□□□ -1.28
PAX6-238	ENST00000638755	ARL2-SNX15	V9GYD0	113 aa		7.04	□□□□□ -1.28
PAX6-238	ENST00000638755	GVQW2	A0A096LPI5	108 aa	Predicted RBP	7.03	□□□□□ -1.28
PAX6-238	ENST00000638755	SCO2	A0A1W2PP80	73 aa		7.03	□□□□□ -1.28
PAX6-238	ENST00000638755	EIF5AL1	Q6IS14	154 aa	Known RBP	7.03	□□□□□ -1.28
PAX6-238	ENST00000638755		Q86TA4	180 aa		7.03	□□□□□ -1.28
PAX6-238	ENST00000638755	LINC00526	Q96FQ7	95 aa		7.03	□□□□□ -1.28
PAX6-238	ENST00000638755	GNG13	Q9P2W3	67 aa		7.03	□□□□□ -1.28
PAX6-238	ENST00000638755		A0A1B0GUV1	79 aa		7.02	□□□□□ -1.29
PAX6-238	ENST00000638755		A0A1W2PNN7	141 aa		7.02	□□□□□ -1.29
PAX6-238	ENST00000638755		H0Y9J4	135 aa		7.02	□□□□□ -1.29
PAX6-238	ENST00000638755	CRIP1	P50238	77 aa		7.02	□□□□□ -1.29
PAX6-238	ENST00000638755	HIST1H2BA	Q96A08	127 aa		7.02	□□□□□ -1.29
PAX6-238	ENST00000638755	NKX6-2	Q9C056	277 aa	Predicted RBP	7.02	□□□□□ -1.29
PAX6-238	ENST00000638755	IGLV7-43	P04211	117 aa		7.01	□□□□□ -1.29
PAX6-238	ENST00000638755	AMT	P48728	403 aa		7.01	□□□□□ -1.29
PAX6-238	ENST00000638755	PTTG1IP	P53801	180 aa		7.01	□□□□□ -1.29
PAX6-238	ENST00000638755	GAGE2B	Q13066	116 aa		7.01	□□□□□ -1.29
PAX6-238	ENST00000638755	CARD19	Q96LW7	228 aa		7.01	□□□□□ -1.29
PAX6-238	ENST00000638755	TMEM243	Q9BU79	118 aa		7.01	□□□□□ -1.29
PAX6-238	ENST00000638755	SH2D1A	O60880	128 aa		7	□□□□□ -1.29
PAX6-238	ENST00000638755	KRTAP1-4	P0C5Y4	121 aa		7	□□□□□ -1.29
PAX6-238	ENST00000638755	AKR1C3	P42330	323 aa		7	□□□□□ -1.29
PAX6-238	ENST00000638755	UBE2G1	P62253	170 aa		7	□□□□□ -1.29
PAX6-238	ENST00000638755	SRSF3	P84103	164 aa	Known RBP	7	□□□□□ -1.29
PAX6-238	ENST00000638755	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	7	□□□□□ -1.29
PAX6-238	ENST00000638755	FMC1	Q96HJ9	113 aa		7	□□□□□ -1.29
PAX6-238	ENST00000638755	RPL13A	P40429	203 aa	Known RBP	6.99	□□□□□ -1.29
PAX6-238	ENST00000638755	LINC01547	P58512	204 aa	Predicted RBP	6.99	□□□□□ -1.29
PAX6-238	ENST00000638755	PHF5A	Q7RTV0	110 aa	Known RBP	6.99	□□□□□ -1.29
PAX6-238	ENST00000638755	MANBAL	Q9NQG1	85 aa		6.99	□□□□□ -1.29
PAX6-238	ENST00000638755	MUC21	A0A140T8X8	626 aa		6.98	□□□□□ -1.29
PAX6-238	ENST00000638755	UBE2L6	O14933	153 aa		6.98	□□□□□ -1.29
PAX6-238	ENST00000638755	LTA	P01374	205 aa		6.98	□□□□□ -1.29
PAX6-238	ENST00000638755	SST	P61278	116 aa		6.98	□□□□□ -1.29
PAX6-238	ENST00000638755	OR10AG1	Q8NH19	301 aa		6.98	□□□□□ -1.29
PAX6-238	ENST00000638755	TCEAL7	Q9BRU2	100 aa		6.98	□□□□□ -1.29
PAX6-238	ENST00000638755	CDIP1	Q9H305	208 aa		6.98	□□□□□ -1.29
PAX6-238	ENST00000638755	RAB19	A4D1S5	217 aa		6.97	□□□□□ -1.29
PAX6-238	ENST00000638755	TEX46	H3BTG2	121 aa		6.97	□□□□□ -1.29
PAX6-238	ENST00000638755	BCL2	P10415	239 aa		6.97	□□□□□ -1.29
PAX6-238	ENST00000638755	RPL35	P42766	123 aa	Known RBP	6.97	□□□□□ -1.29
PAX6-238	ENST00000638755	C9orf116	Q5BN46	136 aa	Predicted RBP	6.97	□□□□□ -1.29
PAX6-238	ENST00000638755	FAM162B	Q5T6X4	162 aa		6.97	□□□□□ -1.29
PAX6-238	ENST00000638755	COX8C	Q7Z4L0	72 aa		6.97	□□□□□ -1.29
PAX6-238	ENST00000638755	ZFP30	Q9Y2G7	519 aa		6.97	□□□□□ -1.29
PAX6-238	ENST00000638755		A0A087WZ39	114 aa		6.96	□□□□□ -1.3
PAX6-238	ENST00000638755	LOC107984640	A0A0U1RRK4	108 aa		6.96	□□□□□ -1.3
PAX6-238	ENST00000638755	MEF2B	Q02080	365 aa	Predicted RBP	6.96	□□□□□ -1.3
PAX6-238	ENST00000638755	SYCN	Q0VAF6	134 aa		6.96	□□□□□ -1.3
PAX6-238	ENST00000638755	ZNF674	Q2M3X9	581 aa		6.96	□□□□□ -1.3
PAX6-238	ENST00000638755	LINC01559	Q495D7	138 aa		6.96	□□□□□ -1.3
PAX6-238	ENST00000638755	BAGE2	Q86Y30	109 aa		6.96	□□□□□ -1.3
PAX6-238	ENST00000638755	C11orf52	Q96A22	123 aa		6.96	□□□□□ -1.3
PAX6-238	ENST00000638755	MLST8	Q9BVC4	326 aa		6.96	□□□□□ -1.3
PAX6-238	ENST00000638755	IFNA1	P01562	189 aa		6.95	□□□□□ -1.3
PAX6-238	ENST00000638755	BLOC1S1	P78537	153 aa		6.95	□□□□□ -1.3
PAX6-238	ENST00000638755	FOXI1	Q12951	378 aa		6.95	□□□□□ -1.3
PAX6-238	ENST00000638755	CENPW	Q5EE01	88 aa		6.95	□□□□□ -1.3
PAX6-238	ENST00000638755	MED9	Q9NWA0	146 aa		6.95	□□□□□ -1.3
PAX6-238	ENST00000638755	TRBV20OR9-2	A0A075B6H5	130 aa		6.94	□□□□□ -1.3
PAX6-238	ENST00000638755	S100A9	P06702	114 aa	Known RBP	6.94	□□□□□ -1.3
PAX6-238	ENST00000638755	SMIM17	P0DL12	118 aa		6.94	□□□□□ -1.3
PAX6-238	ENST00000638755	SPANXN1	Q5VSR9	72 aa		6.94	□□□□□ -1.3
PAX6-238	ENST00000638755	RETNLB	Q9BQ08	111 aa		6.94	□□□□□ -1.3
PAX6-238	ENST00000638755	ZNF561-AS1	K7EIQ3	104 aa		6.93	□□□□□ -1.3
PAX6-238	ENST00000638755	PDE6D	O43924	150 aa		6.93	□□□□□ -1.3
PAX6-238	ENST00000638755	XCL1	P47992	114 aa		6.93	□□□□□ -1.3
PAX6-238	ENST00000638755	KRTAP11-1	Q8IUC1	163 aa		6.93	□□□□□ -1.3
PAX6-238	ENST00000638755	IGHV1-58	A0A0C4DH39	117 aa		6.92	□□□□□ -1.3
PAX6-238	ENST00000638755		M0QY20	66 aa		6.92	□□□□□ -1.3
PAX6-238	ENST00000638755	MGP	P08493	103 aa		6.92	□□□□□ -1.3
PAX6-238	ENST00000638755	FGF6	P10767	208 aa		6.92	□□□□□ -1.3
PAX6-238	ENST00000638755	TEX261	Q6UWH6	196 aa		6.92	□□□□□ -1.3
PAX6-238	ENST00000638755	KRTAP9-7	A8MTY7	169 aa		6.91	□□□□□ -1.3
PAX6-238	ENST00000638755	CAMP	P49913	170 aa		6.91	□□□□□ -1.3
PAX6-238	ENST00000638755	GNG4	P50150	75 aa		6.91	□□□□□ -1.3
PAX6-238	ENST00000638755	CEBPG	P53567	150 aa		6.91	□□□□□ -1.3
PAX6-238	ENST00000638755	RPL18A	Q02543	176 aa	Known RBP	6.91	□□□□□ -1.3
PAX6-238	ENST00000638755	AMMECR1L	Q6DCA0	310 aa		6.91	□□□□□ -1.3
PAX6-238	ENST00000638755	SUMO4	Q6EEV6	95 aa		6.9	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms