RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 HSPG2P98160 4391 aa14.47□□□□□ -0.09
SCN1B-206ENST00000638536 TRBV6-5A0A0K0K1A5 114 aa14.47□□□□□ -0.09
SCN1B-206ENST00000638536 A0A1B0GXF2 115 aa14.47□□□□□ -0.09
SCN1B-206ENST00000638536 COTL1Q14019 142 aa14.47□□□□□ -0.09
SCN1B-206ENST00000638536 FAM104BQ5XKR9 115 aa14.47□□□□□ -0.09
SCN1B-206ENST00000638536 ANGP03950 147 aaKnown RBP14.46□□□□□ -0.09
SCN1B-206ENST00000638536 MRPL51Q4U2R6 128 aaKnown RBP14.46□□□□□ -0.09
SCN1B-206ENST00000638536 TMEM243Q9BU79 118 aa14.46□□□□□ -0.09
SCN1B-206ENST00000638536 PPP1R2P9O14990 202 aa14.45□□□□□ -0.1
SCN1B-206ENST00000638536 MRAP2Q96G30 205 aa14.45□□□□□ -0.1
SCN1B-206ENST00000638536 F8W036 122 aa14.44□□□□□ -0.1
SCN1B-206ENST00000638536 AMTP48728 403 aa14.44□□□□□ -0.1
SCN1B-206ENST00000638536 NRACQ8N912 160 aa14.44□□□□□ -0.1
SCN1B-206ENST00000638536 TMEM70Q9BUB7 260 aa14.44□□□□□ -0.1
SCN1B-206ENST00000638536 IGLV4-60A0A075B6I1 120 aa14.44□□□□□ -0.1
SCN1B-206ENST00000638536 IGKV2D-24A0A075B6R9 120 aa14.44□□□□□ -0.1
SCN1B-206ENST00000638536 POLR2KP53803 58 aaKnown RBP14.44□□□□□ -0.1
SCN1B-206ENST00000638536 ELOBQ15370 118 aa14.44□□□□□ -0.1
SCN1B-206ENST00000638536 CLPSL2Q6UWE3 100 aa14.44□□□□□ -0.1
SCN1B-206ENST00000638536 TM2D2Q9BX73 214 aa14.44□□□□□ -0.1
SCN1B-206ENST00000638536 LINC00862A6NCI5 91 aa14.43□□□□□ -0.1
SCN1B-206ENST00000638536 LECT2O14960 151 aa14.43□□□□□ -0.1
SCN1B-206ENST00000638536 MT-ND4LP03901 98 aa14.43□□□□□ -0.1
SCN1B-206ENST00000638536 HBBP68871 147 aa14.43□□□□□ -0.1
SCN1B-206ENST00000638536 C20orf203Q8NBC4 194 aa14.43□□□□□ -0.1
SCN1B-206ENST00000638536 ANAPC16Q96DE5 110 aa14.43□□□□□ -0.1
SCN1B-206ENST00000638536 ST20Q9HBF5 79 aa14.43□□□□□ -0.1
SCN1B-206ENST00000638536 LINC00269Q8N2A0 174 aa14.42□□□□□ -0.1
SCN1B-206ENST00000638536 A0A1B0GW15 77 aa14.41□□□□□ -0.1
SCN1B-206ENST00000638536 I3L3M4 83 aa14.41□□□□□ -0.1
SCN1B-206ENST00000638536 EREGO14944 169 aa14.41□□□□□ -0.1
SCN1B-206ENST00000638536 PMCHP20382 165 aa14.41□□□□□ -0.1
SCN1B-206ENST00000638536 BAALCQ8WXS3 180 aa14.41□□□□□ -0.1
SCN1B-206ENST00000638536 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.41□□□□□ -0.1
SCN1B-206ENST00000638536 IGKV2-29A2NJV5 120 aaPredicted RBP14.41□□□□□ -0.1
SCN1B-206ENST00000638536 PKIAP61925 76 aa14.41□□□□□ -0.1
SCN1B-206ENST00000638536 PRR34Q9NV39 138 aa14.41□□□□□ -0.1
SCN1B-206ENST00000638536 TSHBP01222 138 aa14.4□□□□□ -0.1
SCN1B-206ENST00000638536 SEC11CQ9BY50 192 aa14.4□□□□□ -0.1
SCN1B-206ENST00000638536 TMEM242Q9NWH2 141 aa14.4□□□□□ -0.1
SCN1B-206ENST00000638536 A0A1B0GUV1 79 aa14.39□□□□□ -0.11
SCN1B-206ENST00000638536 CRPP02741 224 aa14.39□□□□□ -0.11
SCN1B-206ENST00000638536 Q0VG73 95 aa14.39□□□□□ -0.11
SCN1B-206ENST00000638536 Q8N814 137 aa14.39□□□□□ -0.11
SCN1B-206ENST00000638536 PGPEP1Q9NXJ5 209 aa14.39□□□□□ -0.11
SCN1B-206ENST00000638536 TRBV27A0A0K0K1C4 114 aa14.38□□□□□ -0.11
SCN1B-206ENST00000638536 UBE2L6O14933 153 aa14.38□□□□□ -0.11
SCN1B-206ENST00000638536 APCSP02743 223 aa14.38□□□□□ -0.11
SCN1B-206ENST00000638536 ATP5L2Q7Z4Y8 100 aa14.37□□□□□ -0.11
SCN1B-206ENST00000638536 D6R8Y8 96 aa14.37□□□□□ -0.11
SCN1B-206ENST00000638536 CKS2P33552 79 aa14.37□□□□□ -0.11
SCN1B-206ENST00000638536 RMI2Q96E14 147 aa14.37□□□□□ -0.11
SCN1B-206ENST00000638536 DNAH8Q96JB1 4490 aa14.37□□□□□ -0.11
SCN1B-206ENST00000638536 ESDP10768 282 aa14.36□□□□□ -0.11
SCN1B-206ENST00000638536 SUMO2P61956 95 aaKnown RBP14.36□□□□□ -0.11
SCN1B-206ENST00000638536 REG3AQ06141 175 aa14.36□□□□□ -0.11
SCN1B-206ENST00000638536 KRTAP26-1Q6PEX3 210 aa14.36□□□□□ -0.11
SCN1B-206ENST00000638536 C1orf43Q9BWL3 253 aa14.36□□□□□ -0.11
SCN1B-206ENST00000638536 COX11Q9Y6N1 276 aa14.36□□□□□ -0.11
SCN1B-206ENST00000638536 S100A8P05109 93 aa14.35□□□□□ -0.11
SCN1B-206ENST00000638536 MIAQ16674 131 aa14.35□□□□□ -0.11
SCN1B-206ENST00000638536 C10orf91Q5T1B1 145 aa14.35□□□□□ -0.11
SCN1B-206ENST00000638536 IGLV10-54A0A075B6I4 117 aa14.34□□□□□ -0.11
SCN1B-206ENST00000638536 TRBV24-1A0A075B6N3 115 aa14.34□□□□□ -0.11
SCN1B-206ENST00000638536 SLC7A5P1Q8MH63 180 aa14.34□□□□□ -0.11
SCN1B-206ENST00000638536 TNFRSF6BO95407 300 aa14.33□□□□□ -0.11
SCN1B-206ENST00000638536 NPYP01303 97 aa14.33□□□□□ -0.11
SCN1B-206ENST00000638536 KRTAP10-1P60331 282 aa14.33□□□□□ -0.11
SCN1B-206ENST00000638536 KRTAP17-1Q9BYP8 105 aa14.33□□□□□ -0.11
SCN1B-206ENST00000638536 VCYO14598 125 aa14.33□□□□□ -0.12
SCN1B-206ENST00000638536 FGF6P10767 208 aa14.33□□□□□ -0.12
SCN1B-206ENST00000638536 CDPF1Q6NVV7 123 aa14.33□□□□□ -0.12
SCN1B-206ENST00000638536 PPP1R17O96001 155 aa14.32□□□□□ -0.12
SCN1B-206ENST00000638536 RNASEKQ6P5S7 137 aaKnown RBP14.32□□□□□ -0.12
SCN1B-206ENST00000638536 BTF3L4Q96K17 158 aa14.32□□□□□ -0.12
SCN1B-206ENST00000638536 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.31□□□□□ -0.12
SCN1B-206ENST00000638536 CARHSP1Q9Y2V2 147 aaKnown RBP14.31□□□□□ -0.12
SCN1B-206ENST00000638536 IGLV5-52A0A0A0MRZ9 124 aa14.3□□□□□ -0.12
SCN1B-206ENST00000638536 H7C423 109 aa14.3□□□□□ -0.12
SCN1B-206ENST00000638536 HLA-DQA1P01909 254 aa14.3□□□□□ -0.12
SCN1B-206ENST00000638536 AMMECR1LQ6DCA0 310 aa14.3□□□□□ -0.12
SCN1B-206ENST00000638536 C20orf78Q9BR46 151 aa14.3□□□□□ -0.12
SCN1B-206ENST00000638536 CTDSP1Q9GZU7 261 aa14.3□□□□□ -0.12
SCN1B-206ENST00000638536 IGKV3OR2-268A0A0C4DH90 116 aa14.3□□□□□ -0.12
SCN1B-206ENST00000638536 IMMP2LQ96T52 175 aa14.3□□□□□ -0.12
SCN1B-206ENST00000638536 C7orf77A4D0Y5 90 aa14.29□□□□□ -0.12
SCN1B-206ENST00000638536 TMEM136Q6ZRR5 245 aa14.29□□□□□ -0.12
SCN1B-206ENST00000638536 FCER1GP30273 86 aa14.28□□□□□ -0.12
SCN1B-206ENST00000638536 GCSHP23434 173 aa14.27□□□□□ -0.12
SCN1B-206ENST00000638536 ORMDL3Q8N138 153 aa14.27□□□□□ -0.12
SCN1B-206ENST00000638536 NTN5Q8WTR8 489 aaPredicted RBP14.27□□□□□ -0.12
SCN1B-206ENST00000638536 PRELID3AQ96N28 172 aa14.27□□□□□ -0.12
SCN1B-206ENST00000638536 SMIM2Q9BVW6 85 aa14.27□□□□□ -0.12
SCN1B-206ENST00000638536 CDK2AP2O75956 126 aa14.26□□□□□ -0.13
SCN1B-206ENST00000638536 PPBPP02775 128 aa14.26□□□□□ -0.13
SCN1B-206ENST00000638536 RPL32P62910 135 aaKnown RBP14.26□□□□□ -0.13
SCN1B-206ENST00000638536 CLRN3Q8NCR9 226 aa14.26□□□□□ -0.13
SCN1B-206ENST00000638536 KIR2DL4Q99706 377 aa14.26□□□□□ -0.13
SCN1B-206ENST00000638536 USP17L23D6RBM5 183 aa14.26□□□□□ -0.13
SCN1B-206ENST00000638536 TRAV8-4A0A0B4J246 113 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms