RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 AMN1Q8IY45 258 aa11.11□□□□□ -0.63
UBE3D-208ENST00000626828 Q8N814 137 aa11.11□□□□□ -0.63
UBE3D-208ENST00000626828 NTN5Q8WTR8 489 aaPredicted RBP11.11□□□□□ -0.63
UBE3D-208ENST00000626828 ST20Q9HBF5 79 aa11.11□□□□□ -0.63
UBE3D-208ENST00000626828 I3L3M4 83 aa11.1□□□□□ -0.63
UBE3D-208ENST00000626828 UBE2L6O14933 153 aa11.1□□□□□ -0.63
UBE3D-208ENST00000626828 PPP1R17O96001 155 aa11.1□□□□□ -0.63
UBE3D-208ENST00000626828 MIAQ16674 131 aa11.1□□□□□ -0.63
UBE3D-208ENST00000626828 MAPKAPK5-AS1Q8N8E1 139 aa11.1□□□□□ -0.63
UBE3D-208ENST00000626828 DEFB104AQ8WTQ1 72 aa11.1□□□□□ -0.63
UBE3D-208ENST00000626828 C1orf43Q9BWL3 253 aa11.1□□□□□ -0.63
UBE3D-208ENST00000626828 PRR34Q9NV39 138 aa11.1□□□□□ -0.63
UBE3D-208ENST00000626828 MT-ND4LP03901 98 aa11.09□□□□□ -0.63
UBE3D-208ENST00000626828 S100A8P05109 93 aa11.09□□□□□ -0.63
UBE3D-208ENST00000626828 FUSP35637 526 aaKnown RBP eCLIP11.09□□□□□ -0.63
UBE3D-208ENST00000626828 CAMPP49913 170 aa11.09□□□□□ -0.63
UBE3D-208ENST00000626828 FAM104BQ5XKR9 115 aa11.09□□□□□ -0.63
UBE3D-208ENST00000626828 UQCC3Q6UW78 93 aa11.09□□□□□ -0.63
UBE3D-208ENST00000626828 LINC00269Q8N2A0 174 aa11.09□□□□□ -0.63
UBE3D-208ENST00000626828 BAALCQ8WXS3 180 aa11.09□□□□□ -0.63
UBE3D-208ENST00000626828 GAS8-AS1O95177 125 aa11.08□□□□□ -0.64
UBE3D-208ENST00000626828 GCSHP23434 173 aa11.08□□□□□ -0.64
UBE3D-208ENST00000626828 POLR2KP53803 58 aaKnown RBP11.08□□□□□ -0.64
UBE3D-208ENST00000626828 ANAPC16Q96DE5 110 aa11.08□□□□□ -0.64
UBE3D-208ENST00000626828 HERC2O95714 4834 aa11.07□□□□□ -0.64
UBE3D-208ENST00000626828 IGLV5-52A0A0A0MRZ9 124 aa11.07□□□□□ -0.64
UBE3D-208ENST00000626828 LINC00862A6NCI5 91 aa11.07□□□□□ -0.64
UBE3D-208ENST00000626828 H7C423 109 aa11.07□□□□□ -0.64
UBE3D-208ENST00000626828 C20orf203Q8NBC4 194 aa11.07□□□□□ -0.64
UBE3D-208ENST00000626828 TMEM70Q9BUB7 260 aa11.07□□□□□ -0.64
UBE3D-208ENST00000626828 LRP1BQ9NZR2 4599 aa11.07□□□□□ -0.64
UBE3D-208ENST00000626828 VCYO14598 125 aa11.06□□□□□ -0.64
UBE3D-208ENST00000626828 APCSP02743 223 aa11.06□□□□□ -0.64
UBE3D-208ENST00000626828 REG3AQ06141 175 aa11.06□□□□□ -0.64
UBE3D-208ENST00000626828 WFDC2Q14508 124 aa11.06□□□□□ -0.64
UBE3D-208ENST00000626828 IGLV4-60A0A075B6I1 120 aa11.05□□□□□ -0.64
UBE3D-208ENST00000626828 TRAV8-4A0A0B4J246 113 aa11.05□□□□□ -0.64
UBE3D-208ENST00000626828 TRBV27A0A0K0K1C4 114 aa11.05□□□□□ -0.64
UBE3D-208ENST00000626828 F8W036 122 aa11.05□□□□□ -0.64
UBE3D-208ENST00000626828 LECT2O14960 151 aa11.05□□□□□ -0.64
UBE3D-208ENST00000626828 RPS10P46783 165 aaKnown RBP11.05□□□□□ -0.64
UBE3D-208ENST00000626828 HBBP68871 147 aa11.05□□□□□ -0.64
UBE3D-208ENST00000626828 MRPL51Q4U2R6 128 aaKnown RBP11.05□□□□□ -0.64
UBE3D-208ENST00000626828 MRPL54Q6P161 138 aaKnown RBP11.05□□□□□ -0.64
UBE3D-208ENST00000626828 DNAH5Q8TE73 4624 aa11.04□□□□□ -0.64
UBE3D-208ENST00000626828 TMEM218A2RU14 115 aa11.04□□□□□ -0.64
UBE3D-208ENST00000626828 SMKR1H3BMG3 65 aa11.04□□□□□ -0.64
UBE3D-208ENST00000626828 CKS2P33552 79 aa11.04□□□□□ -0.64
UBE3D-208ENST00000626828 AMMECR1LQ6DCA0 310 aa11.04□□□□□ -0.64
UBE3D-208ENST00000626828 ATP5L2Q7Z4Y8 100 aa11.04□□□□□ -0.64
UBE3D-208ENST00000626828 A0A1B0GXF2 115 aa11.03□□□□□ -0.64
UBE3D-208ENST00000626828 KRTAP10-1P60331 282 aa11.03□□□□□ -0.64
UBE3D-208ENST00000626828 C14orf177Q52M58 125 aa11.03□□□□□ -0.64
UBE3D-208ENST00000626828 CLPSL2Q6UWE3 100 aa11.03□□□□□ -0.64
UBE3D-208ENST00000626828 NRACQ8N912 160 aa11.03□□□□□ -0.64
UBE3D-208ENST00000626828 RYR1P21817 5038 aa11.03□□□□□ -0.64
UBE3D-208ENST00000626828 TRBV24-1A0A075B6N3 115 aa11.02□□□□□ -0.65
UBE3D-208ENST00000626828 TSHBP01222 138 aa11.02□□□□□ -0.65
UBE3D-208ENST00000626828 ESDP10768 282 aa11.02□□□□□ -0.65
UBE3D-208ENST00000626828 SUMO2P61956 95 aaKnown RBP11.02□□□□□ -0.65
UBE3D-208ENST00000626828 RNASEKQ6P5S7 137 aaKnown RBP11.02□□□□□ -0.65
UBE3D-208ENST00000626828 C20orf78Q9BR46 151 aa11.02□□□□□ -0.65
UBE3D-208ENST00000626828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.01□□□□□ -0.65
UBE3D-208ENST00000626828 IGKV2-29A2NJV5 120 aaPredicted RBP11.01□□□□□ -0.65
UBE3D-208ENST00000626828 FGF6P10767 208 aa11.01□□□□□ -0.65
UBE3D-208ENST00000626828 KIR2DL4Q99706 377 aa11.01□□□□□ -0.65
UBE3D-208ENST00000626828 TMEM242Q9NWH2 141 aa11.01□□□□□ -0.65
UBE3D-208ENST00000626828 IGLV2-33A0A075B6J2 118 aaPredicted RBP11□□□□□ -0.65
UBE3D-208ENST00000626828 PPBPP02775 128 aa11□□□□□ -0.65
UBE3D-208ENST00000626828 ZNF25P17030 456 aaPredicted RBP11□□□□□ -0.65
UBE3D-208ENST00000626828 FCER1GP30273 86 aa11□□□□□ -0.65
UBE3D-208ENST00000626828 KRTAP26-1Q6PEX3 210 aa11□□□□□ -0.65
UBE3D-208ENST00000626828 TMEM101Q96IK0 257 aa11□□□□□ -0.65
UBE3D-208ENST00000626828 BTF3L4Q96K17 158 aa11□□□□□ -0.65
UBE3D-208ENST00000626828 IGLV10-54A0A075B6I4 117 aa10.99□□□□□ -0.65
UBE3D-208ENST00000626828 HLA-DQA1P01909 254 aa10.99□□□□□ -0.65
UBE3D-208ENST00000626828 SEC11CQ9BY50 192 aa10.99□□□□□ -0.65
UBE3D-208ENST00000626828 TNFRSF6BO95407 300 aa10.98□□□□□ -0.65
UBE3D-208ENST00000626828 RPL32P62910 135 aaKnown RBP10.98□□□□□ -0.65
UBE3D-208ENST00000626828 COMMD7Q86VX2 200 aa10.98□□□□□ -0.65
UBE3D-208ENST00000626828 IMMP2LQ96T52 175 aa10.98□□□□□ -0.65
UBE3D-208ENST00000626828 CTDSP1Q9GZU7 261 aa10.98□□□□□ -0.65
UBE3D-208ENST00000626828 C7orf77A4D0Y5 90 aa10.97□□□□□ -0.65
UBE3D-208ENST00000626828 D6R8Y8 96 aa10.97□□□□□ -0.65
UBE3D-208ENST00000626828 USP17L23D6RBM5 183 aa10.97□□□□□ -0.65
UBE3D-208ENST00000626828 PHOX2AO14813 284 aa10.97□□□□□ -0.65
UBE3D-208ENST00000626828 TCAPO15273 167 aa10.97□□□□□ -0.65
UBE3D-208ENST00000626828 ADCYAP1P18509 176 aa10.97□□□□□ -0.65
UBE3D-208ENST00000626828 XGP55808 180 aa10.97□□□□□ -0.65
UBE3D-208ENST00000626828 SMAGPQ0VAQ4 97 aa10.97□□□□□ -0.65
UBE3D-208ENST00000626828 TMEM136Q6ZRR5 245 aa10.97□□□□□ -0.65
UBE3D-208ENST00000626828 DGAT2L7PQ6IED9 249 aa10.96□□□□□ -0.65
UBE3D-208ENST00000626828 MRPL52Q86TS9 123 aaKnown RBP10.96□□□□□ -0.65
UBE3D-208ENST00000626828 ORMDL3Q8N138 153 aa10.96□□□□□ -0.65
UBE3D-208ENST00000626828 CLRN3Q8NCR9 226 aa10.96□□□□□ -0.65
UBE3D-208ENST00000626828 OR5A1Q8NGJ0 315 aa10.96□□□□□ -0.65
UBE3D-208ENST00000626828 IGKV3OR2-268A0A0C4DH90 116 aa10.95□□□□□ -0.66
UBE3D-208ENST00000626828 TMEM18Q96B42 140 aa10.95□□□□□ -0.66
UBE3D-208ENST00000626828 Q8N1X5 172 aa10.94□□□□□ -0.66
UBE3D-208ENST00000626828 PRELID3AQ96N28 172 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms