RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 COTL1Q14019 142 aa11.39□□□□□ -0.59
CCNA1-203ENST00000625767 Q8N3U1 123 aa11.39□□□□□ -0.59
CCNA1-203ENST00000625767 Q8N8P6 123 aa11.39□□□□□ -0.59
CCNA1-203ENST00000625767 SACSQ9NZJ4 4579 aa11.39□□□□□ -0.59
CCNA1-203ENST00000625767 SH2D6Q7Z4S9 175 aa11.38□□□□□ -0.59
CCNA1-203ENST00000625767 TCTAP57738 103 aa11.37□□□□□ -0.59
CCNA1-203ENST00000625767 WFDC10BQ8IUB3 73 aa11.37□□□□□ -0.59
CCNA1-203ENST00000625767 PRSS3P2Q8NHM4 247 aa11.37□□□□□ -0.59
CCNA1-203ENST00000625767 CHCHD7Q9BUK0 85 aa11.37□□□□□ -0.59
CCNA1-203ENST00000625767 HYDINQ4G0P3 5121 aa11.37□□□□□ -0.59
CCNA1-203ENST00000625767 LINC00310P59036 64 aa11.36□□□□□ -0.59
CCNA1-203ENST00000625767 LELP1Q5T871 98 aa11.36□□□□□ -0.59
CCNA1-203ENST00000625767 KIR2DL4Q99706 377 aa11.36□□□□□ -0.59
CCNA1-203ENST00000625767 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.36□□□□□ -0.59
CCNA1-203ENST00000625767 IGKV2-29A2NJV5 120 aaPredicted RBP11.36□□□□□ -0.59
CCNA1-203ENST00000625767 FCER1GP30273 86 aa11.36□□□□□ -0.59
CCNA1-203ENST00000625767 AMTP48728 403 aa11.36□□□□□ -0.59
CCNA1-203ENST00000625767 CCL18P55774 89 aa11.36□□□□□ -0.59
CCNA1-203ENST00000625767 NIT1Q86X76 327 aa11.36□□□□□ -0.59
CCNA1-203ENST00000625767 C1orf196B1AJZ1 125 aa11.35□□□□□ -0.59
CCNA1-203ENST00000625767 NXT2Q9NPJ8 142 aaKnown RBP11.35□□□□□ -0.59
CCNA1-203ENST00000625767 KMT2CQ8NEZ4 4911 aaKnown RBP11.34□□□□□ -0.59
CCNA1-203ENST00000625767 TRBV25-1A0A075B6N4 114 aa11.34□□□□□ -0.59
CCNA1-203ENST00000625767 IGHV1-24A0A0C4DH33 117 aa11.34□□□□□ -0.59
CCNA1-203ENST00000625767 NUPR1O60356 82 aa11.34□□□□□ -0.59
CCNA1-203ENST00000625767 ESDP10768 282 aa11.34□□□□□ -0.59
CCNA1-203ENST00000625767 TIRAPP58753 221 aa11.34□□□□□ -0.59
CCNA1-203ENST00000625767 PMCHL1Q16048 86 aa11.34□□□□□ -0.59
CCNA1-203ENST00000625767 RNASEKQ6P5S7 137 aaKnown RBP11.34□□□□□ -0.59
CCNA1-203ENST00000625767 UBE2DNLQ8IWF7 75 aa11.34□□□□□ -0.59
CCNA1-203ENST00000625767 MRPS16Q9Y3D3 137 aaKnown RBP11.34□□□□□ -0.59
CCNA1-203ENST00000625767 RPL39P62891 51 aaKnown RBP11.33□□□□□ -0.6
CCNA1-203ENST00000625767 Q0VG73 95 aa11.33□□□□□ -0.6
CCNA1-203ENST00000625767 GAGE6Q13070 117 aa11.33□□□□□ -0.6
CCNA1-203ENST00000625767 FA2HQ7L5A8 372 aa11.33□□□□□ -0.6
CCNA1-203ENST00000625767 BAGE3Q86Y29 109 aa11.33□□□□□ -0.6
CCNA1-203ENST00000625767 CHCHD5Q9BSY4 110 aa11.33□□□□□ -0.6
CCNA1-203ENST00000625767 DNAH6Q9C0G6 4158 aa11.33□□□□□ -0.6
CCNA1-203ENST00000625767 LINC00614P0C842 121 aa11.33□□□□□ -0.6
CCNA1-203ENST00000625767 TMEM243Q9BU79 118 aa11.33□□□□□ -0.6
CCNA1-203ENST00000625767 DNAH10Q8IVF4 4471 aa11.33□□□□□ -0.6
CCNA1-203ENST00000625767 SERF1AO75920 110 aa11.32□□□□□ -0.6
CCNA1-203ENST00000625767 LAGE3Q14657 143 aa11.32□□□□□ -0.6
CCNA1-203ENST00000625767 A0A096LNJ9 63 aa11.31□□□□□ -0.6
CCNA1-203ENST00000625767 LINC01546A6NGU7 62 aa11.31□□□□□ -0.6
CCNA1-203ENST00000625767 TMEM97Q5BJF2 176 aa11.31□□□□□ -0.6
CCNA1-203ENST00000625767 MPV17L2Q567V2 206 aa11.3□□□□□ -0.6
CCNA1-203ENST00000625767 Q8N976 141 aa11.3□□□□□ -0.6
CCNA1-203ENST00000625767 C20orf203Q8NBC4 194 aa11.3□□□□□ -0.6
CCNA1-203ENST00000625767 AP5S1Q9NUS5 200 aa11.3□□□□□ -0.6
CCNA1-203ENST00000625767 DNAH2Q9P225 4427 aa11.3□□□□□ -0.6
CCNA1-203ENST00000625767 TRAV8-6A0A0B4J262 113 aa11.3□□□□□ -0.6
CCNA1-203ENST00000625767 LY6G6CO95867 125 aa11.3□□□□□ -0.6
CCNA1-203ENST00000625767 LINC00476Q8WZB0 136 aa11.3□□□□□ -0.6
CCNA1-203ENST00000625767 UPK3BQ9BT76 320 aa11.3□□□□□ -0.6
CCNA1-203ENST00000625767 TMEM262E9PQX1 116 aa11.29□□□□□ -0.6
CCNA1-203ENST00000625767 IGHV3-30P01768 117 aa11.29□□□□□ -0.6
CCNA1-203ENST00000625767 IGHV3-33P01772 117 aa11.29□□□□□ -0.6
CCNA1-203ENST00000625767 IGHV3-30-3P0DP02 117 aa11.29□□□□□ -0.6
CCNA1-203ENST00000625767 IGHV3-30-5P0DP03 117 aa11.29□□□□□ -0.6
CCNA1-203ENST00000625767 BTF3P20290 206 aaKnown RBP11.29□□□□□ -0.6
CCNA1-203ENST00000625767 LGALS9CQ6DKI2 356 aa11.29□□□□□ -0.6
CCNA1-203ENST00000625767 FAM19A2Q8N3H0 131 aa11.29□□□□□ -0.6
CCNA1-203ENST00000625767 NDUFA6P56556 154 aa11.28□□□□□ -0.6
CCNA1-203ENST00000625767 RAB5BP61020 215 aa11.28□□□□□ -0.6
CCNA1-203ENST00000625767 ORMDL2Q53FV1 153 aa11.28□□□□□ -0.6
CCNA1-203ENST00000625767 Q9H8V8 135 aa11.28□□□□□ -0.6
CCNA1-203ENST00000625767 IGLV4-60A0A075B6I1 120 aa11.27□□□□□ -0.6
CCNA1-203ENST00000625767 UBE2L6O14933 153 aa11.27□□□□□ -0.6
CCNA1-203ENST00000625767 SIVA1O15304 175 aa11.27□□□□□ -0.6
CCNA1-203ENST00000625767 FGF6P10767 208 aa11.27□□□□□ -0.6
CCNA1-203ENST00000625767 C2orf66Q6UXQ4 117 aa11.27□□□□□ -0.6
CCNA1-203ENST00000625767 RBX1P62877 108 aa11.27□□□□□ -0.61
CCNA1-203ENST00000625767 CHCHD1Q96BP2 118 aaKnown RBP11.27□□□□□ -0.61
CCNA1-203ENST00000625767 OPRPNQ99935 248 aaPredicted RBP11.27□□□□□ -0.61
CCNA1-203ENST00000625767 KRTAP1-5Q9BYS1 174 aa11.27□□□□□ -0.61
CCNA1-203ENST00000625767 UBE2D4Q9Y2X8 147 aa11.27□□□□□ -0.61
CCNA1-203ENST00000625767 K7EMI3 77 aa11.26□□□□□ -0.61
CCNA1-203ENST00000625767 FAM104AQ969W3 186 aa11.26□□□□□ -0.61
CCNA1-203ENST00000625767 DNAH10OSP0CZ25 163 aa11.25□□□□□ -0.61
CCNA1-203ENST00000625767 RNASE13Q5GAN3 156 aaKnown RBP11.25□□□□□ -0.61
CCNA1-203ENST00000625767 TMA7Q9Y2S6 64 aaKnown RBP11.25□□□□□ -0.61
CCNA1-203ENST00000625767 A0A087WX48 190 aa11.24□□□□□ -0.61
CCNA1-203ENST00000625767 HSBP1O75506 76 aa11.24□□□□□ -0.61
CCNA1-203ENST00000625767 LINC01556Q5JQF7 62 aa11.24□□□□□ -0.61
CCNA1-203ENST00000625767 TOMM6Q96B49 74 aa11.24□□□□□ -0.61
CCNA1-203ENST00000625767 CYSLTR1Q9Y271 337 aa11.24□□□□□ -0.61
CCNA1-203ENST00000625767 PDZD11Q5EBL8 140 aa11.24□□□□□ -0.61
CCNA1-203ENST00000625767 COA6Q5JTJ3 125 aaKnown RBP11.24□□□□□ -0.61
CCNA1-203ENST00000625767 AMMECR1LQ6DCA0 310 aa11.24□□□□□ -0.61
CCNA1-203ENST00000625767 CLPSL2Q6UWE3 100 aa11.24□□□□□ -0.61
CCNA1-203ENST00000625767 Q6ZUT4 128 aa11.24□□□□□ -0.61
CCNA1-203ENST00000625767 ZC2HC1BQ5TFG8 222 aa11.23□□□□□ -0.61
CCNA1-203ENST00000625767 LINC00173Q6ZV60 143 aa11.23□□□□□ -0.61
CCNA1-203ENST00000625767 FRAS1Q86XX4 4008 aa11.22□□□□□ -0.61
CCNA1-203ENST00000625767 H7C423 109 aa11.22□□□□□ -0.61
CCNA1-203ENST00000625767 M0R2N4 97 aa11.22□□□□□ -0.61
CCNA1-203ENST00000625767 HBDP02042 147 aa11.22□□□□□ -0.61
CCNA1-203ENST00000625767 MRPL52Q86TS9 123 aaKnown RBP11.22□□□□□ -0.61
CCNA1-203ENST00000625767 KLK12Q9UKR0 248 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms