RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 KNCNA6PVL3 124 aa11.15□□□□□ -0.62
LINC00552-201ENST00000625151 FAM104AQ969W3 186 aa11.15□□□□□ -0.62
LINC00552-201ENST00000625151 TRAV2A0A0B4J234 112 aa11.15□□□□□ -0.63
LINC00552-201ENST00000625151 PRM2P04554 102 aa11.15□□□□□ -0.63
LINC00552-201ENST00000625151 FHL3Q13643 280 aa11.15□□□□□ -0.63
LINC00552-201ENST00000625151 RNF152Q8N8N0 203 aa11.15□□□□□ -0.63
LINC00552-201ENST00000625151 RAX2Q96IS3 184 aa11.15□□□□□ -0.63
LINC00552-201ENST00000625151 PDZD2O15018 2839 aa11.14□□□□□ -0.63
LINC00552-201ENST00000625151 TRBV20-1A0A075B6N2 111 aa11.14□□□□□ -0.63
LINC00552-201ENST00000625151 LINC01356Q8N9X3 169 aa11.14□□□□□ -0.63
LINC00552-201ENST00000625151 CARD19Q96LW7 228 aa11.14□□□□□ -0.63
LINC00552-201ENST00000625151 CDIP1Q9H305 208 aa11.14□□□□□ -0.63
LINC00552-201ENST00000625151 PRRC2AP48634 2157 aaKnown RBP11.14□□□□□ -0.63
LINC00552-201ENST00000625151 MUSTN1Q8IVN3 82 aa11.14□□□□□ -0.63
LINC00552-201ENST00000625151 RNF183Q96D59 192 aa11.14□□□□□ -0.63
LINC00552-201ENST00000625151 SCGB1C2P0DMR2 95 aa11.13□□□□□ -0.63
LINC00552-201ENST00000625151 CEMP1Q6PRD7 247 aaPredicted RBP11.13□□□□□ -0.63
LINC00552-201ENST00000625151 TEN1Q86WV5 123 aa11.13□□□□□ -0.63
LINC00552-201ENST00000625151 SBSPONQ8IVN8 264 aa11.13□□□□□ -0.63
LINC00552-201ENST00000625151 TMEM263Q8WUH6 116 aaKnown RBP11.13□□□□□ -0.63
LINC00552-201ENST00000625151 Q9UF83 564 aa11.13□□□□□ -0.63
LINC00552-201ENST00000625151 FASNP49327 2511 aaKnown RBP11.12□□□□□ -0.63
LINC00552-201ENST00000625151 A0A096LNT2 108 aa11.12□□□□□ -0.63
LINC00552-201ENST00000625151 IGHV3-33P01772 117 aa11.12□□□□□ -0.63
LINC00552-201ENST00000625151 CD28P10747 220 aa11.12□□□□□ -0.63
LINC00552-201ENST00000625151 ZNF702PQ9H963 129 aa11.12□□□□□ -0.63
LINC00552-201ENST00000625151 VPREB3Q9UKI3 123 aa11.12□□□□□ -0.63
LINC00552-201ENST00000625151 ELANEP08246 267 aa11.12□□□□□ -0.63
LINC00552-201ENST00000625151 DEFB136Q30KP8 78 aa11.12□□□□□ -0.63
LINC00552-201ENST00000625151 RNASE13Q5GAN3 156 aaKnown RBP11.12□□□□□ -0.63
LINC00552-201ENST00000625151 C18orf65Q6ZTR6 163 aa11.12□□□□□ -0.63
LINC00552-201ENST00000625151 UBE2E2Q96LR5 201 aa11.12□□□□□ -0.63
LINC00552-201ENST00000625151 SPXQ9BT56 116 aa11.12□□□□□ -0.63
LINC00552-201ENST00000625151 ADARB2-AS1A8MUL3 147 aa11.11□□□□□ -0.63
LINC00552-201ENST00000625151 IGHV3-30-3P0DP02 117 aa11.11□□□□□ -0.63
LINC00552-201ENST00000625151 SLURP1P55000 103 aa11.11□□□□□ -0.63
LINC00552-201ENST00000625151 DSCR9P59020 149 aa11.11□□□□□ -0.63
LINC00552-201ENST00000625151 DEFB131AP59861 70 aa11.11□□□□□ -0.63
LINC00552-201ENST00000625151 PPDPFLQ8WWR9 84 aa11.11□□□□□ -0.63
LINC00552-201ENST00000625151 EDA2RQ9HAV5 297 aa11.11□□□□□ -0.63
LINC00552-201ENST00000625151 HECTD1Q9ULT8 2610 aa11.11□□□□□ -0.63
LINC00552-201ENST00000625151 A0A0J9YXY3 114 aa11.11□□□□□ -0.63
LINC00552-201ENST00000625151 RBMY1BA6NDE4 496 aaKnown RBP11.11□□□□□ -0.63
LINC00552-201ENST00000625151 RBMY1EA6NEQ0 496 aaKnown RBP11.11□□□□□ -0.63
LINC00552-201ENST00000625151 A8MWV9 139 aa11.11□□□□□ -0.63
LINC00552-201ENST00000625151 H7C2G1 150 aa11.11□□□□□ -0.63
LINC00552-201ENST00000625151 M0R2P5 195 aa11.11□□□□□ -0.63
LINC00552-201ENST00000625151 RBMY1DP0C7P1 496 aaKnown RBP11.11□□□□□ -0.63
LINC00552-201ENST00000625151 PYGO1Q9Y3Y4 419 aa11.11□□□□□ -0.63
LINC00552-201ENST00000625151 UNC79Q9P2D8 2635 aa11.1□□□□□ -0.63
LINC00552-201ENST00000625151 SPINK8P0C7L1 97 aa11.1□□□□□ -0.63
LINC00552-201ENST00000625151 DEFB113Q30KQ7 82 aa11.1□□□□□ -0.63
LINC00552-201ENST00000625151 TEX15Q9BXT5 2789 aa11.1□□□□□ -0.63
LINC00552-201ENST00000625151 TRAV8-3A0A0A6YYJ7 113 aa11.1□□□□□ -0.63
LINC00552-201ENST00000625151 A0A0B4J2C4 111 aa11.1□□□□□ -0.63
LINC00552-201ENST00000625151 Q6ZSN1 163 aa11.1□□□□□ -0.63
LINC00552-201ENST00000625151 ANKRD29Q8N6D5 301 aa11.1□□□□□ -0.63
LINC00552-201ENST00000625151 MRPS36P82909 103 aaKnown RBP11.09□□□□□ -0.63
LINC00552-201ENST00000625151 ANAPC13Q9BS18 74 aa11.09□□□□□ -0.63
LINC00552-201ENST00000625151 TIMM21Q9BVV7 248 aa11.09□□□□□ -0.63
LINC00552-201ENST00000625151 CCDC168Q8NDH2 2452 aa11.09□□□□□ -0.63
LINC00552-201ENST00000625151 H3BMM0 161 aa11.09□□□□□ -0.63
LINC00552-201ENST00000625151 KRTAP1-3Q8IUG1 177 aa11.09□□□□□ -0.63
LINC00552-201ENST00000625151 DUX3Q96PT4 197 aa11.09□□□□□ -0.63
LINC00552-201ENST00000625151 BEX4Q9NWD9 120 aaPredicted RBP11.08□□□□□ -0.64
LINC00552-201ENST00000625151 J3QLI3 93 aa11.08□□□□□ -0.64
LINC00552-201ENST00000625151 Q6YL49 198 aa11.08□□□□□ -0.64
LINC00552-201ENST00000625151 LITAFQ99732 161 aa11.08□□□□□ -0.64
LINC00552-201ENST00000625151 A8MTW9 85 aa11.07□□□□□ -0.64
LINC00552-201ENST00000625151 C9JAW5 83 aa11.07□□□□□ -0.64
LINC00552-201ENST00000625151 SLC25A20O43772 301 aa11.07□□□□□ -0.64
LINC00552-201ENST00000625151 MT-ATP8P03928 68 aa11.07□□□□□ -0.64
LINC00552-201ENST00000625151 CHCHD7Q9BUK0 85 aa11.07□□□□□ -0.64
LINC00552-201ENST00000625151 ITPR3Q14573 2671 aa11.07□□□□□ -0.64
LINC00552-201ENST00000625151 CR1P17927 2039 aa11.06□□□□□ -0.64
LINC00552-201ENST00000625151 XGP55808 180 aa11.06□□□□□ -0.64
LINC00552-201ENST00000625151 YAE1D1Q9NRH1 226 aa11.06□□□□□ -0.64
LINC00552-201ENST00000625151 SPANXA1Q9NS26 97 aa11.06□□□□□ -0.64
LINC00552-201ENST00000625151 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.06□□□□□ -0.64
LINC00552-201ENST00000625151 A8MZ25 164 aa11.06□□□□□ -0.64
LINC00552-201ENST00000625151 SMIM20Q8N5G0 67 aa11.06□□□□□ -0.64
LINC00552-201ENST00000625151 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.05□□□□□ -0.64
LINC00552-201ENST00000625151 IGHV1-58A0A0C4DH39 117 aa11.05□□□□□ -0.64
LINC00552-201ENST00000625151 IGKV2-29A2NJV5 120 aaPredicted RBP11.05□□□□□ -0.64
LINC00552-201ENST00000625151 B5MCH6 92 aa11.05□□□□□ -0.64
LINC00552-201ENST00000625151 Q1RN00 199 aa11.05□□□□□ -0.64
LINC00552-201ENST00000625151 ADAMTSL4-AS1Q5T5F5 129 aa11.05□□□□□ -0.64
LINC00552-201ENST00000625151 Q6ZUT4 128 aa11.05□□□□□ -0.64
LINC00552-201ENST00000625151 TMEM61Q8N0U2 210 aa11.05□□□□□ -0.64
LINC00552-201ENST00000625151 UBE2D4Q9Y2X8 147 aa11.05□□□□□ -0.64
LINC00552-201ENST00000625151 FSHBP01225 129 aa11.05□□□□□ -0.64
LINC00552-201ENST00000625151 ZNF415Q09FC8 603 aa11.04□□□□□ -0.64
LINC00552-201ENST00000625151 Q96MF0 132 aa11.04□□□□□ -0.64
LINC00552-201ENST00000625151 MYO9AB2RTY4 2548 aa11.04□□□□□ -0.64
LINC00552-201ENST00000625151 IGHV3-38A0A0C4DH36 116 aa11.04□□□□□ -0.64
LINC00552-201ENST00000625151 NDUFA12Q9UI09 145 aa11.04□□□□□ -0.64
LINC00552-201ENST00000625151 HIST2H2BDQ6DRA6 164 aa11.03□□□□□ -0.64
LINC00552-201ENST00000625151 LINC00467Q9BRT7 94 aa11.03□□□□□ -0.64
LINC00552-201ENST00000625151 CUBNO60494 3623 aa11.03□□□□□ -0.64
LINC00552-201ENST00000625151 TINCRA0A1B0GVN0 87 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms