RNA–Protein interactions for RNA: ENST00000622565.4

LTBP4-239, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-239ENST00000622565 IGLV10-54A0A075B6I4 117 aa12.52□□□□□ -0.41
LTBP4-239ENST00000622565 CEBPGP53567 150 aa12.52□□□□□ -0.41
LTBP4-239ENST00000622565 REG3AQ06141 175 aa12.52□□□□□ -0.41
LTBP4-239ENST00000622565 TMEM243Q9BU79 118 aa12.52□□□□□ -0.41
LTBP4-239ENST00000622565 GATCO43716 136 aaKnown RBP12.51□□□□□ -0.41
LTBP4-239ENST00000622565 FAM231DQ6ZW35 169 aa12.51□□□□□ -0.41
LTBP4-239ENST00000622565 CIRBP-AS1Q8TBR5 109 aa12.51□□□□□ -0.41
LTBP4-239ENST00000622565 RPL39LQ96EH5 51 aaKnown RBP12.51□□□□□ -0.41
LTBP4-239ENST00000622565 CHAC1Q9BUX1 264 aa12.51□□□□□ -0.41
LTBP4-239ENST00000622565 C14orf177Q52M58 125 aa12.5□□□□□ -0.41
LTBP4-239ENST00000622565 A0A1B0GUV1 79 aa12.49□□□□□ -0.41
LTBP4-239ENST00000622565 AMTP48728 403 aa12.48□□□□□ -0.41
LTBP4-239ENST00000622565 COTL1Q14019 142 aa12.48□□□□□ -0.41
LTBP4-239ENST00000622565 GAS8-AS1O95177 125 aa12.47□□□□□ -0.41
LTBP4-239ENST00000622565 KRTAP10-4P60372 401 aaPredicted RBP12.47□□□□□ -0.41
LTBP4-239ENST00000622565 FAM210AQ96ND0 272 aa12.47□□□□□ -0.41
LTBP4-239ENST00000622565 EIF5A2Q9GZV4 153 aaKnown RBP12.47□□□□□ -0.41
LTBP4-239ENST00000622565 A8MWL6 223 aa12.46□□□□□ -0.41
LTBP4-239ENST00000622565 SRP19P09132 144 aaKnown RBP12.46□□□□□ -0.41
LTBP4-239ENST00000622565 LINC01551Q86U37 167 aa12.46□□□□□ -0.41
LTBP4-239ENST00000622565 SMIM7Q9BQ49 75 aa12.46□□□□□ -0.41
LTBP4-239ENST00000622565 PLA2G1BP04054 148 aaKnown RBP12.45□□□□□ -0.42
LTBP4-239ENST00000622565 CT83Q5H943 113 aa12.45□□□□□ -0.42
LTBP4-239ENST00000622565 C9orf163Q8N9P6 203 aa12.45□□□□□ -0.42
LTBP4-239ENST00000622565 PANO1I0J062 215 aa12.44□□□□□ -0.42
LTBP4-239ENST00000622565 DGAT2L7PQ6IED9 249 aa12.44□□□□□ -0.42
LTBP4-239ENST00000622565 FLG2Q5D862 2391 aaPredicted RBP12.43□□□□□ -0.42
LTBP4-239ENST00000622565 TRAV8-4A0A0B4J246 113 aa12.43□□□□□ -0.42
LTBP4-239ENST00000622565 UBE2L6O14933 153 aa12.43□□□□□ -0.42
LTBP4-239ENST00000622565 NDUFS6O75380 124 aaKnown RBP12.43□□□□□ -0.42
LTBP4-239ENST00000622565 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.42□□□□□ -0.42
LTBP4-239ENST00000622565 IGKV2-29A2NJV5 120 aaPredicted RBP12.42□□□□□ -0.42
LTBP4-239ENST00000622565 SDHAF1A6NFY7 115 aa12.42□□□□□ -0.42
LTBP4-239ENST00000622565 ZNF727A8MUV8 499 aa12.42□□□□□ -0.42
LTBP4-239ENST00000622565 SLPIP03973 132 aa12.42□□□□□ -0.42
LTBP4-239ENST00000622565 SMIM15Q7Z3B0 74 aa12.42□□□□□ -0.42
LTBP4-239ENST00000622565 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.42□□□□□ -0.42
LTBP4-239ENST00000622565 TSKUQ8WUA8 353 aa12.41□□□□□ -0.42
LTBP4-239ENST00000622565 FAM231BA6NCW3 169 aa12.4□□□□□ -0.42
LTBP4-239ENST00000622565 HIGD1CA8MV81 97 aa12.4□□□□□ -0.42
LTBP4-239ENST00000622565 C9JQL5 133 aa12.4□□□□□ -0.42
LTBP4-239ENST00000622565 SDIM1Q6ZPB5 146 aa12.4□□□□□ -0.42
LTBP4-239ENST00000622565 RNF185Q96GF1 192 aa12.4□□□□□ -0.42
LTBP4-239ENST00000622565 OSTCQ9NRP0 149 aa12.4□□□□□ -0.42
LTBP4-239ENST00000622565 DMBT1Q9UGM3 2413 aaPredicted RBP12.4□□□□□ -0.42
LTBP4-239ENST00000622565 IGKV3OR2-268A0A0C4DH90 116 aa12.39□□□□□ -0.43
LTBP4-239ENST00000622565 TRBV6-5A0A0K0K1A5 114 aa12.39□□□□□ -0.43
LTBP4-239ENST00000622565 hDV102S1A0JD36 115 aa12.39□□□□□ -0.43
LTBP4-239ENST00000622565 NCR2O95944 276 aa12.39□□□□□ -0.43
LTBP4-239ENST00000622565 TEX261Q6UWH6 196 aa12.39□□□□□ -0.43
LTBP4-239ENST00000622565 CLRN3Q8NCR9 226 aa12.39□□□□□ -0.43
LTBP4-239ENST00000622565 V9GYV3 84 aa12.39□□□□□ -0.43
LTBP4-239ENST00000622565 A0A1B0GUT8 65 aa12.38□□□□□ -0.43
LTBP4-239ENST00000622565 GAGE12HA6NDE8 117 aa12.38□□□□□ -0.43
LTBP4-239ENST00000622565 APCSP02743 223 aa12.38□□□□□ -0.43
LTBP4-239ENST00000622565 RPS10P46783 165 aaKnown RBP12.38□□□□□ -0.43
LTBP4-239ENST00000622565 CNBPP62633 177 aaKnown RBP12.38□□□□□ -0.43
LTBP4-239ENST00000622565 C15orf56Q8N910 161 aa12.38□□□□□ -0.43
LTBP4-239ENST00000622565 TMEM191AQ9H0A3 160 aa12.38□□□□□ -0.43
LTBP4-239ENST00000622565 TSHBP01222 138 aa12.37□□□□□ -0.43
LTBP4-239ENST00000622565 FGF6P10767 208 aa12.37□□□□□ -0.43
LTBP4-239ENST00000622565 RAB4AP20338 218 aa12.37□□□□□ -0.43
LTBP4-239ENST00000622565 SRSF3P84103 164 aaKnown RBP12.37□□□□□ -0.43
LTBP4-239ENST00000622565 ISOC2Q96AB3 205 aa12.37□□□□□ -0.43
LTBP4-239ENST00000622565 I3L3M4 83 aa12.36□□□□□ -0.43
LTBP4-239ENST00000622565 PMCHP20382 165 aa12.36□□□□□ -0.43
LTBP4-239ENST00000622565 RPL23P62829 140 aaKnown RBP12.36□□□□□ -0.43
LTBP4-239ENST00000622565 AMMECR1LQ6DCA0 310 aa12.36□□□□□ -0.43
LTBP4-239ENST00000622565 RNASEKQ6P5S7 137 aaKnown RBP12.36□□□□□ -0.43
LTBP4-239ENST00000622565 AMN1Q8IY45 258 aa12.36□□□□□ -0.43
LTBP4-239ENST00000622565 BORCS7Q96B45 105 aa12.36□□□□□ -0.43
LTBP4-239ENST00000622565 LRP1Q07954 4544 aaKnown RBP12.35□□□□□ -0.43
LTBP4-239ENST00000622565 ESDP10768 282 aa12.35□□□□□ -0.43
LTBP4-239ENST00000622565 NUP35Q8NFH5 326 aa12.35□□□□□ -0.43
LTBP4-239ENST00000622565 TMEM242Q9NWH2 141 aa12.35□□□□□ -0.43
LTBP4-239ENST00000622565 SMKR1H3BMG3 65 aa12.34□□□□□ -0.43
LTBP4-239ENST00000622565 H7C423 109 aa12.34□□□□□ -0.43
LTBP4-239ENST00000622565 POLR2KP53803 58 aaKnown RBP12.34□□□□□ -0.43
LTBP4-239ENST00000622565 TMEM241Q24JQ0 296 aa12.34□□□□□ -0.43
LTBP4-239ENST00000622565 CHCHD10Q8WYQ3 142 aaPredicted RBP12.34□□□□□ -0.43
LTBP4-239ENST00000622565 ST20Q9HBF5 79 aa12.34□□□□□ -0.43
LTBP4-239ENST00000622565 KRTAP29-1A8MX34 341 aaPredicted RBP12.33□□□□□ -0.44
LTBP4-239ENST00000622565 J3QL48 77 aa12.32□□□□□ -0.44
LTBP4-239ENST00000622565 CIRBPQ14011 172 aaKnown RBP12.32□□□□□ -0.44
LTBP4-239ENST00000622565 CHTF8P0CG12 524 aa12.31□□□□□ -0.44
LTBP4-239ENST00000622565 HNRNPA3P51991 378 aaKnown RBP12.31□□□□□ -0.44
LTBP4-239ENST00000622565 ADIRFQ15847 76 aa12.31□□□□□ -0.44
LTBP4-239ENST00000622565 HIGD2BQ4VC39 106 aa12.31□□□□□ -0.44
LTBP4-239ENST00000622565 MRAP2Q96G30 205 aa12.31□□□□□ -0.44
LTBP4-239ENST00000622565 FAT3Q8TDW7 4589 aa12.3□□□□□ -0.44
LTBP4-239ENST00000622565 TRBV27A0A0K0K1C4 114 aa12.3□□□□□ -0.44
LTBP4-239ENST00000622565 ZNF25P17030 456 aaPredicted RBP12.3□□□□□ -0.44
LTBP4-239ENST00000622565 RPL37AP61513 92 aaKnown RBP12.3□□□□□ -0.44
LTBP4-239ENST00000622565 FOXI1Q12951 378 aa12.3□□□□□ -0.44
LTBP4-239ENST00000622565 RIGQ13278 110 aa12.3□□□□□ -0.44
LTBP4-239ENST00000622565 FAM74A3Q4VXF1 159 aa12.3□□□□□ -0.44
LTBP4-239ENST00000622565 NRACQ8N912 160 aa12.3□□□□□ -0.44
LTBP4-239ENST00000622565 OR5A1Q8NGJ0 315 aa12.3□□□□□ -0.44
LTBP4-239ENST00000622565 AP5S1Q9NUS5 200 aa12.3□□□□□ -0.44
LTBP4-239ENST00000622565 IGHV3-64A0A075B6Q5 118 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms