RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PKIAP61925 76 aa12.55□□□□□ -0.4
CIRBP-245ENST00000621399 LINC00336Q6ZUF6 198 aa12.55□□□□□ -0.4
CIRBP-245ENST00000621399 TMEM243Q9BU79 118 aa12.55□□□□□ -0.4
CIRBP-245ENST00000621399 CHCHD7Q9BUK0 85 aa12.55□□□□□ -0.4
CIRBP-245ENST00000621399 IBA57-AS1B1ANH7 110 aa12.54□□□□□ -0.4
CIRBP-245ENST00000621399 VCYO14598 125 aa12.54□□□□□ -0.4
CIRBP-245ENST00000621399 POLR2KP53803 58 aaKnown RBP12.54□□□□□ -0.4
CIRBP-245ENST00000621399 SUMO2P61956 95 aaKnown RBP12.54□□□□□ -0.4
CIRBP-245ENST00000621399 GAGE6Q13070 117 aa12.54□□□□□ -0.4
CIRBP-245ENST00000621399 TMEM136Q6ZRR5 245 aa12.54□□□□□ -0.4
CIRBP-245ENST00000621399 ORMDL3Q8N138 153 aa12.54□□□□□ -0.4
CIRBP-245ENST00000621399 DNAH17Q9UFH2 4485 aa12.54□□□□□ -0.4
CIRBP-245ENST00000621399 TRBV24-1A0A075B6N3 115 aa12.53□□□□□ -0.4
CIRBP-245ENST00000621399 TRBV27A0A0K0K1C4 114 aa12.53□□□□□ -0.4
CIRBP-245ENST00000621399 TNFRSF6BO95407 300 aa12.53□□□□□ -0.4
CIRBP-245ENST00000621399 NFE4Q86UQ8 179 aa12.53□□□□□ -0.4
CIRBP-245ENST00000621399 C20orf78Q9BR46 151 aa12.53□□□□□ -0.4
CIRBP-245ENST00000621399 PRSS29PA6NIE9 313 aa12.52□□□□□ -0.41
CIRBP-245ENST00000621399 UBE2L6O14933 153 aa12.52□□□□□ -0.41
CIRBP-245ENST00000621399 APCSP02743 223 aa12.52□□□□□ -0.41
CIRBP-245ENST00000621399 ELOBQ15370 118 aa12.52□□□□□ -0.41
CIRBP-245ENST00000621399 MPV17L2Q567V2 206 aa12.52□□□□□ -0.41
CIRBP-245ENST00000621399 PRELID3AQ96N28 172 aa12.52□□□□□ -0.41
CIRBP-245ENST00000621399 FRAS1Q86XX4 4008 aa12.52□□□□□ -0.41
CIRBP-245ENST00000621399 TSHBP01222 138 aa12.51□□□□□ -0.41
CIRBP-245ENST00000621399 NPYP01303 97 aa12.51□□□□□ -0.41
CIRBP-245ENST00000621399 ATRAIDQ6UW56 229 aa12.51□□□□□ -0.41
CIRBP-245ENST00000621399 Q9HAA7 133 aa12.51□□□□□ -0.41
CIRBP-245ENST00000621399 KLK12Q9UKR0 248 aa12.51□□□□□ -0.41
CIRBP-245ENST00000621399 PHOX2AO14813 284 aa12.5□□□□□ -0.41
CIRBP-245ENST00000621399 RBX1P62877 108 aa12.5□□□□□ -0.41
CIRBP-245ENST00000621399 LAGE3Q14657 143 aa12.5□□□□□ -0.41
CIRBP-245ENST00000621399 Q8N976 141 aa12.5□□□□□ -0.41
CIRBP-245ENST00000621399 KIR2DL4Q99706 377 aa12.5□□□□□ -0.41
CIRBP-245ENST00000621399 FAT2Q9NYQ8 4349 aa12.49□□□□□ -0.41
CIRBP-245ENST00000621399 FCER1GP30273 86 aa12.49□□□□□ -0.41
CIRBP-245ENST00000621399 COX19Q49B96 90 aa12.49□□□□□ -0.41
CIRBP-245ENST00000621399 GNB1LQ9BYB4 327 aa12.49□□□□□ -0.41
CIRBP-245ENST00000621399 TRAV8-3A0A0A6YYJ7 113 aa12.48□□□□□ -0.41
CIRBP-245ENST00000621399 TGIF2-C20orf24A0A0A6YYL0 155 aa12.48□□□□□ -0.41
CIRBP-245ENST00000621399 HLA-DQA1P01909 254 aa12.48□□□□□ -0.41
CIRBP-245ENST00000621399 ANGP03950 147 aaKnown RBP12.48□□□□□ -0.41
CIRBP-245ENST00000621399 RPL32P62910 135 aaKnown RBP12.48□□□□□ -0.41
CIRBP-245ENST00000621399 Q6ZRN7 208 aaPredicted RBP12.48□□□□□ -0.41
CIRBP-245ENST00000621399 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.47□□□□□ -0.41
CIRBP-245ENST00000621399 IGKV2-29A2NJV5 120 aaPredicted RBP12.47□□□□□ -0.41
CIRBP-245ENST00000621399 TNP2Q05952 138 aa12.47□□□□□ -0.41
CIRBP-245ENST00000621399 UBE2WQ96B02 151 aa12.47□□□□□ -0.41
CIRBP-245ENST00000621399 SMIM2Q9BVW6 85 aa12.47□□□□□ -0.41
CIRBP-245ENST00000621399 LAMTOR2Q9Y2Q5 125 aa12.47□□□□□ -0.41
CIRBP-245ENST00000621399 H7C423 109 aa12.46□□□□□ -0.41
CIRBP-245ENST00000621399 A0A1B0GUV1 79 aa12.45□□□□□ -0.42
CIRBP-245ENST00000621399 CRPP02741 224 aa12.45□□□□□ -0.42
CIRBP-245ENST00000621399 MT-ND6P03923 174 aa12.45□□□□□ -0.42
CIRBP-245ENST00000621399 ESDP10768 282 aa12.45□□□□□ -0.42
CIRBP-245ENST00000621399 KIAA1644Q3SXP7 199 aa12.45□□□□□ -0.42
CIRBP-245ENST00000621399 AMMECR1LQ6DCA0 310 aa12.45□□□□□ -0.42
CIRBP-245ENST00000621399 LOC389332A0A1B0GUA5 103 aa12.44□□□□□ -0.42
CIRBP-245ENST00000621399 TCAPO15273 167 aa12.44□□□□□ -0.42
CIRBP-245ENST00000621399 PSCAO43653 123 aa12.44□□□□□ -0.42
CIRBP-245ENST00000621399 RNASEKQ6P5S7 137 aaKnown RBP12.44□□□□□ -0.42
CIRBP-245ENST00000621399 LINC00269Q8N2A0 174 aa12.44□□□□□ -0.42
CIRBP-245ENST00000621399 TM2D2Q9BX73 214 aa12.44□□□□□ -0.42
CIRBP-245ENST00000621399 KRTAP17-1Q9BYP8 105 aa12.44□□□□□ -0.42
CIRBP-245ENST00000621399 MAP1LC3AQ9H492 121 aa12.44□□□□□ -0.42
CIRBP-245ENST00000621399 IGLV4-60A0A075B6I1 120 aa12.43□□□□□ -0.42
CIRBP-245ENST00000621399 FGF6P10767 208 aa12.43□□□□□ -0.42
CIRBP-245ENST00000621399 Q0VG73 95 aa12.43□□□□□ -0.42
CIRBP-245ENST00000621399 ENHOQ6UWT2 76 aa12.43□□□□□ -0.42
CIRBP-245ENST00000621399 C20orf203Q8NBC4 194 aa12.43□□□□□ -0.42
CIRBP-245ENST00000621399 RMI2Q96E14 147 aa12.43□□□□□ -0.42
CIRBP-245ENST00000621399 MRPL18Q9H0U6 180 aaKnown RBP12.43□□□□□ -0.42
CIRBP-245ENST00000621399 SMCO4Q9NRQ5 59 aa12.43□□□□□ -0.42
CIRBP-245ENST00000621399 PRSS47A8MTI9 375 aa12.42□□□□□ -0.42
CIRBP-245ENST00000621399 RAB5AP20339 215 aa12.42□□□□□ -0.42
CIRBP-245ENST00000621399 FABP9Q0Z7S8 132 aa12.42□□□□□ -0.42
CIRBP-245ENST00000621399 IGKV2D-24A0A075B6R9 120 aa12.41□□□□□ -0.42
CIRBP-245ENST00000621399 CLPSL2Q6UWE3 100 aa12.41□□□□□ -0.42
CIRBP-245ENST00000621399 CBLN2Q8IUK8 224 aa12.41□□□□□ -0.42
CIRBP-245ENST00000621399 TMEM101Q96IK0 257 aa12.41□□□□□ -0.42
CIRBP-245ENST00000621399 PRR34Q9NV39 138 aa12.41□□□□□ -0.42
CIRBP-245ENST00000621399 ZNF25P17030 456 aaPredicted RBP12.4□□□□□ -0.42
CIRBP-245ENST00000621399 REG3AQ06141 175 aa12.4□□□□□ -0.42
CIRBP-245ENST00000621399 YPEL4Q96NS1 127 aa12.4□□□□□ -0.42
CIRBP-245ENST00000621399 TRAPPC1Q9Y5R8 145 aa12.4□□□□□ -0.42
CIRBP-245ENST00000621399 COX11Q9Y6N1 276 aa12.4□□□□□ -0.42
CIRBP-245ENST00000621399 A0A1B0GVY2 172 aa12.39□□□□□ -0.43
CIRBP-245ENST00000621399 MIAQ16674 131 aa12.39□□□□□ -0.43
CIRBP-245ENST00000621399 Q8N8P6 123 aa12.39□□□□□ -0.43
CIRBP-245ENST00000621399 OR5A1Q8NGJ0 315 aa12.39□□□□□ -0.43
CIRBP-245ENST00000621399 TMEM18Q96B42 140 aa12.39□□□□□ -0.43
CIRBP-245ENST00000621399 C1orf43Q9BWL3 253 aa12.39□□□□□ -0.43
CIRBP-245ENST00000621399 PKD1P98161 4303 aa12.38□□□□□ -0.43
CIRBP-245ENST00000621399 HECTD4Q9Y4D8 3996 aa12.38□□□□□ -0.43
CIRBP-245ENST00000621399 SMAGPQ0VAQ4 97 aa12.38□□□□□ -0.43
CIRBP-245ENST00000621399 MRPL52Q86TS9 123 aaKnown RBP12.38□□□□□ -0.43
CIRBP-245ENST00000621399 ALKBH7Q9BT30 221 aaPredicted RBP12.38□□□□□ -0.43
CIRBP-245ENST00000621399 EREGO14944 169 aa12.37□□□□□ -0.43
CIRBP-245ENST00000621399 DGAT2L7PQ6IED9 249 aa12.37□□□□□ -0.43
CIRBP-245ENST00000621399 DNAH11Q96DT5 4516 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms