RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 H3BVH4 76 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 PPP1R17O96001 155 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 INSP01308 110 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 IGLC6P0CF74 106 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 NTF3P20783 257 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 CRIP1P50238 77 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 INSL3P51460 131 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 DEFB131AP59861 70 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 S100A12P80511 92 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 SLAQ13239 276 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 C9orf129Q5T035 196 aaKnown RBP3.32□□□□□ -1.88
VPS29-212ENST00000621131 RNASEKQ6P5S7 137 aaKnown RBP3.32□□□□□ -1.88
VPS29-212ENST00000621131 ZNF493Q6ZR52 646 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 FA2HQ7L5A8 372 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 APRG1Q8IVJ8 170 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 TMEM61Q8N0U2 210 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 ORMDL3Q8N138 153 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 ZFAND2AQ8N6M9 145 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 GATD1Q8NB37 220 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 OR10D4PQ8NGN7 298 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 CHCHD1Q96BP2 118 aaKnown RBP3.32□□□□□ -1.88
VPS29-212ENST00000621131 FAM19A4Q96LR4 140 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 AP1S3Q96PC3 154 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 C20orf144Q9BQM9 153 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 TMEM191AQ9H0A3 160 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 TIMM8BQ9Y5J9 83 aaPredicted RBP3.32□□□□□ -1.88
VPS29-212ENST00000621131 SACSQ9NZJ4 4579 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 HERC2O95714 4834 aa3.32□□□□□ -1.88
VPS29-212ENST00000621131 IGHV1OR15-1A0A075B7D0 117 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 TRAV12-3A0A0B4J271 114 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 C20orf202A1L168 122 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 M0R2Z0 102 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 SNAI2O43623 268 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 ZNF324O75467 553 aaPredicted RBP3.31□□□□□ -1.88
VPS29-212ENST00000621131 SERF1AO75920 110 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 CD7P09564 240 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 ESDP10768 282 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 CKS2P33552 79 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 SSTP61278 116 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 SPINK13Q1W4C9 94 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 DNLZQ5SXM8 178 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 FAM104BQ5XKR9 115 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 TMEM256Q8N2U0 113 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 C18orf32Q8TCD1 76 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 MRAP2Q96G30 205 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 PRELID3AQ96N28 172 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 C12orf57Q99622 126 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 HIST1H2BLQ99880 126 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 TMEM208Q9BTX3 173 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 CNFNQ9BYD5 112 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 MAP1LC3AQ9H492 121 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 DPH3P1Q9H4G8 78 aa3.31□□□□□ -1.88
VPS29-212ENST00000621131 DNAH1Q9P2D7 4330 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 DNAH3Q8TD57 4116 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 MUC21A0A0G2JKD1 596 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 MUC21A0A140T8X8 626 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 KNCNA6PVL3 124 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 D6R8Y8 96 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 H3BMM0 161 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 M0R381 172 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 MGPP08493 103 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 IQCJQ1A5X6 159 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 TDRG1Q3Y452 100 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 PRR9Q5T870 116 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 MORN3Q6PF18 240 aaPredicted RBP3.3□□□□□ -1.88
VPS29-212ENST00000621131 ADAMTSL5Q6ZMM2 481 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 LINC00518Q8N0U6 118 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 OR10AG1Q8NH19 301 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 LYSTQ99698 3801 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 NXT2Q9NPJ8 142 aaKnown RBP3.3□□□□□ -1.88
VPS29-212ENST00000621131 ZMAT5Q9UDW3 170 aaKnown RBP3.3□□□□□ -1.88
VPS29-212ENST00000621131 HSPB8Q9UJY1 196 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 GOLT1BQ9Y3E0 138 aa3.3□□□□□ -1.88
VPS29-212ENST00000621131 TRAV12-2A0A075B6T6 113 aa3.29□□□□□ -1.88
VPS29-212ENST00000621131 A8MTW9 85 aa3.29□□□□□ -1.88
VPS29-212ENST00000621131 IGLV1-51P01701 117 aa3.29□□□□□ -1.88
VPS29-212ENST00000621131 LINC00614P0C842 121 aa3.29□□□□□ -1.88
VPS29-212ENST00000621131 G0S2P27469 103 aa3.29□□□□□ -1.88
VPS29-212ENST00000621131 DEFB1P60022 68 aa3.29□□□□□ -1.88
VPS29-212ENST00000621131 MRPL51Q4U2R6 128 aaKnown RBP3.29□□□□□ -1.88
VPS29-212ENST00000621131 GDF5OSQ5U4N7 250 aa3.29□□□□□ -1.88
VPS29-212ENST00000621131 NIT1Q86X76 327 aa3.29□□□□□ -1.88
VPS29-212ENST00000621131 AMN1Q8IY45 258 aa3.29□□□□□ -1.88
VPS29-212ENST00000621131 LINC01587Q99440 93 aa3.29□□□□□ -1.88
VPS29-212ENST00000621131 LINC00467Q9BRT7 94 aa3.29□□□□□ -1.88
VPS29-212ENST00000621131 SPXQ9BT56 116 aa3.29□□□□□ -1.88
VPS29-212ENST00000621131 U3KQK5 164 aa3.29□□□□□ -1.88
VPS29-212ENST00000621131 LINC01549A6NIU2 74 aa3.28□□□□□ -1.88
VPS29-212ENST00000621131 TSTD3H0UI37 97 aa3.28□□□□□ -1.88
VPS29-212ENST00000621131 H7C1H1 209 aa3.28□□□□□ -1.88
VPS29-212ENST00000621131 K7EMI3 77 aa3.28□□□□□ -1.88
VPS29-212ENST00000621131 TCAPO15273 167 aa3.28□□□□□ -1.88
VPS29-212ENST00000621131 GNRH2O43555 120 aa3.28□□□□□ -1.88
VPS29-212ENST00000621131 LEPROTL1O95214 131 aa3.28□□□□□ -1.88
VPS29-212ENST00000621131 FXYD7P58549 80 aa3.28□□□□□ -1.88
VPS29-212ENST00000621131 KRTDAPP60985 99 aa3.28□□□□□ -1.88
VPS29-212ENST00000621131 JOSD1Q15040 202 aaPredicted RBP3.28□□□□□ -1.88
VPS29-212ENST00000621131 ZNF56Q15929 161 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms