RNA–Protein interactions for RNA: ENST00000612553.4

PMPCA-207, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 1,174 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-207ENST00000612553 USP17L23D6RBM5 183 aa13.48□□□□□ -0.25
PMPCA-207ENST00000612553 TRGC1P0CF51 173 aa13.48□□□□□ -0.25
PMPCA-207ENST00000612553 IFITM2Q01629 132 aa13.48□□□□□ -0.25
PMPCA-207ENST00000612553 LINC00269Q8N2A0 174 aa13.48□□□□□ -0.25
PMPCA-207ENST00000612553 CTRLP40313 264 aa13.47□□□□□ -0.25
PMPCA-207ENST00000612553 RASL11AQ6T310 242 aa13.47□□□□□ -0.25
PMPCA-207ENST00000612553 NTF3P20783 257 aa13.46□□□□□ -0.25
PMPCA-207ENST00000612553 ADIRFQ15847 76 aa13.46□□□□□ -0.25
PMPCA-207ENST00000612553 CLLU1Q5K131 121 aa13.46□□□□□ -0.25
PMPCA-207ENST00000612553 CLPSL2Q6UWE3 100 aa13.46□□□□□ -0.25
PMPCA-207ENST00000612553 CIRBP-AS1Q8TBR5 109 aa13.46□□□□□ -0.25
PMPCA-207ENST00000612553 DEFB104AQ8WTQ1 72 aa13.46□□□□□ -0.25
PMPCA-207ENST00000612553 GTSF1Q8WW33 167 aa13.46□□□□□ -0.25
PMPCA-207ENST00000612553 DPH3P1Q9H4G8 78 aa13.46□□□□□ -0.25
PMPCA-207ENST00000612553 NAT8Q9UHE5 227 aa13.46□□□□□ -0.25
PMPCA-207ENST00000612553 A8MWL6 223 aa13.45□□□□□ -0.26
PMPCA-207ENST00000612553 J3QL48 77 aa13.45□□□□□ -0.26
PMPCA-207ENST00000612553 RPL23P62829 140 aaKnown RBP13.45□□□□□ -0.26
PMPCA-207ENST00000612553 WDR73Q6P4I2 378 aa13.45□□□□□ -0.26
PMPCA-207ENST00000612553 CT83Q5H943 113 aa13.44□□□□□ -0.26
PMPCA-207ENST00000612553 DGAT2L7PQ6IED9 249 aa13.44□□□□□ -0.26
PMPCA-207ENST00000612553 ISOC2Q96AB3 205 aa13.44□□□□□ -0.26
PMPCA-207ENST00000612553 NIT2Q9NQR4 276 aa13.44□□□□□ -0.26
PMPCA-207ENST00000612553 OSTCQ9NRP0 149 aa13.44□□□□□ -0.26
PMPCA-207ENST00000612553 PRSS1P07477 247 aa13.43□□□□□ -0.26
PMPCA-207ENST00000612553 REG3AQ06141 175 aa13.43□□□□□ -0.26
PMPCA-207ENST00000612553 KRTAP26-1Q6PEX3 210 aa13.43□□□□□ -0.26
PMPCA-207ENST00000612553 PGLYRP4Q96LB8 373 aa13.43□□□□□ -0.26
PMPCA-207ENST00000612553 TMEM243Q9BU79 118 aa13.43□□□□□ -0.26
PMPCA-207ENST00000612553 TWIST1Q15672 202 aa13.42□□□□□ -0.26
PMPCA-207ENST00000612553 CNFNQ9BYD5 112 aa13.42□□□□□ -0.26
PMPCA-207ENST00000612553 A0A1B0GUV1 79 aa13.41□□□□□ -0.26
PMPCA-207ENST00000612553 TSKUQ8WUA8 353 aa13.41□□□□□ -0.26
PMPCA-207ENST00000612553 TRAV8-4A0A0B4J246 113 aa13.4□□□□□ -0.26
PMPCA-207ENST00000612553 C9orf163Q8N9P6 203 aa13.4□□□□□ -0.26
PMPCA-207ENST00000612553 C20orf203Q8NBC4 194 aa13.4□□□□□ -0.26
PMPCA-207ENST00000612553 V9GYV3 84 aa13.4□□□□□ -0.26
PMPCA-207ENST00000612553 IGLV10-54A0A075B6I4 117 aa13.39□□□□□ -0.27
PMPCA-207ENST00000612553 KRTAP29-1A8MX34 341 aaPredicted RBP13.39□□□□□ -0.27
PMPCA-207ENST00000612553 CLRN3Q8NCR9 226 aa13.39□□□□□ -0.27
PMPCA-207ENST00000612553 IGLV4-60A0A075B6I1 120 aa13.38□□□□□ -0.27
PMPCA-207ENST00000612553 HIGD1CA8MV81 97 aa13.38□□□□□ -0.27
PMPCA-207ENST00000612553 UBE2L6O14933 153 aa13.38□□□□□ -0.27
PMPCA-207ENST00000612553 KRTAP10-4P60372 401 aaPredicted RBP13.38□□□□□ -0.27
PMPCA-207ENST00000612553 COTL1Q14019 142 aa13.38□□□□□ -0.27
PMPCA-207ENST00000612553 GFRA4Q9GZZ7 299 aa13.38□□□□□ -0.27
PMPCA-207ENST00000612553 AMTP48728 403 aa13.37□□□□□ -0.27
PMPCA-207ENST00000612553 FOXA3P55318 350 aaPredicted RBP13.37□□□□□ -0.27
PMPCA-207ENST00000612553 BORCS7Q96B45 105 aa13.37□□□□□ -0.27
PMPCA-207ENST00000612553 SMIM15Q7Z3B0 74 aa13.36□□□□□ -0.27
PMPCA-207ENST00000612553 GATD1Q8NB37 220 aa13.36□□□□□ -0.27
PMPCA-207ENST00000612553 FAM231BA6NCW3 169 aa13.35□□□□□ -0.27
PMPCA-207ENST00000612553 TRAV26-2A0A0B4J265 109 aa13.34□□□□□ -0.27
PMPCA-207ENST00000612553 A0A1B0GUT8 65 aa13.34□□□□□ -0.27
PMPCA-207ENST00000612553 hDV102S1A0JD36 115 aa13.33□□□□□ -0.28
PMPCA-207ENST00000612553 NUP35Q8NFH5 326 aa13.33□□□□□ -0.28
PMPCA-207ENST00000612553 CNBPP62633 177 aaKnown RBP13.32□□□□□ -0.28
PMPCA-207ENST00000612553 LCE2DQ5TA82 110 aaPredicted RBP13.32□□□□□ -0.28
PMPCA-207ENST00000612553 SDIM1Q6ZPB5 146 aa13.32□□□□□ -0.28
PMPCA-207ENST00000612553 NAT8BQ9UHF3 227 aa13.32□□□□□ -0.28
PMPCA-207ENST00000612553 AP5S1Q9NUS5 200 aa13.31□□□□□ -0.28
PMPCA-207ENST00000612553 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.31□□□□□ -0.28
PMPCA-207ENST00000612553 SMIM27A0A1W2PRY6 76 aa13.3□□□□□ -0.28
PMPCA-207ENST00000612553 NCR2O95944 276 aa13.3□□□□□ -0.28
PMPCA-207ENST00000612553 RPL37AP61513 92 aaKnown RBP13.3□□□□□ -0.28
PMPCA-207ENST00000612553 UQCC3Q6UW78 93 aa13.3□□□□□ -0.28
PMPCA-207ENST00000612553 RPL39LQ96EH5 51 aaKnown RBP13.3□□□□□ -0.28
PMPCA-207ENST00000612553 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.29□□□□□ -0.28
PMPCA-207ENST00000612553 RIGQ13278 110 aa13.29□□□□□ -0.28
PMPCA-207ENST00000612553 COMMD7Q86VX2 200 aa13.29□□□□□ -0.28
PMPCA-207ENST00000612553 LRP1Q07954 4544 aaKnown RBP13.29□□□□□ -0.28
PMPCA-207ENST00000612553 PANO1I0J062 215 aa13.28□□□□□ -0.28
PMPCA-207ENST00000612553 PNRC1Q12796 327 aaPredicted RBP13.28□□□□□ -0.28
PMPCA-207ENST00000612553 AMMECR1LQ6DCA0 310 aa13.28□□□□□ -0.28
PMPCA-207ENST00000612553 IGHV3-64A0A075B6Q5 118 aa13.27□□□□□ -0.29
PMPCA-207ENST00000612553 H7C423 109 aa13.27□□□□□ -0.29
PMPCA-207ENST00000612553 OXTP01178 125 aa13.27□□□□□ -0.29
PMPCA-207ENST00000612553 APCSP02743 223 aa13.27□□□□□ -0.29
PMPCA-207ENST00000612553 TMEM191AQ9H0A3 160 aa13.27□□□□□ -0.29
PMPCA-207ENST00000612553 IGKV3OR2-268A0A0C4DH90 116 aa13.26□□□□□ -0.29
PMPCA-207ENST00000612553 TMEM218A2RU14 115 aa13.26□□□□□ -0.29
PMPCA-207ENST00000612553 GAGE12HA6NDE8 117 aa13.26□□□□□ -0.29
PMPCA-207ENST00000612553 SDHAF1A6NFY7 115 aa13.26□□□□□ -0.29
PMPCA-207ENST00000612553 F8W036 122 aa13.25□□□□□ -0.29
PMPCA-207ENST00000612553 PPP1R2P9O14990 202 aa13.25□□□□□ -0.29
PMPCA-207ENST00000612553 SLPIP03973 132 aa13.25□□□□□ -0.29
PMPCA-207ENST00000612553 ADCYAP1P18509 176 aa13.25□□□□□ -0.29
PMPCA-207ENST00000612553 CIRBPQ14011 172 aaKnown RBP13.25□□□□□ -0.29
PMPCA-207ENST00000612553 RNASEKQ6P5S7 137 aaKnown RBP13.25□□□□□ -0.29
PMPCA-207ENST00000612553 CFAP161Q6P656 301 aa13.25□□□□□ -0.29
PMPCA-207ENST00000612553 FAT3Q8TDW7 4589 aa13.24□□□□□ -0.29
PMPCA-207ENST00000612553 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.24□□□□□ -0.29
PMPCA-207ENST00000612553 IGKV2-29A2NJV5 120 aaPredicted RBP13.24□□□□□ -0.29
PMPCA-207ENST00000612553 AMN1Q8IY45 258 aa13.24□□□□□ -0.29
PMPCA-207ENST00000612553 RNF185Q96GF1 192 aa13.24□□□□□ -0.29
PMPCA-207ENST00000612553 TRBV6-5A0A0K0K1A5 114 aa13.23□□□□□ -0.29
PMPCA-207ENST00000612553 LINC00862A6NCI5 91 aa13.23□□□□□ -0.29
PMPCA-207ENST00000612553 I3L3M4 83 aa13.23□□□□□ -0.29
PMPCA-207ENST00000612553 MT-ND4LP03901 98 aa13.23□□□□□ -0.29
PMPCA-207ENST00000612553 FGF6P10767 208 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms