RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 CAMPP49913 170 aa17.27■□□□□ 0.36
VEGFA-226ENST00000611736 CDPF1Q6NVV7 123 aa17.27■□□□□ 0.36
VEGFA-226ENST00000611736 MAPKAPK5-AS1Q8N8E1 139 aa17.27■□□□□ 0.36
VEGFA-226ENST00000611736 MRAP2Q96G30 205 aa17.27■□□□□ 0.36
VEGFA-226ENST00000611736 UBE2L6O14933 153 aa17.26■□□□□ 0.35
VEGFA-226ENST00000611736 LECT2O14960 151 aa17.26■□□□□ 0.35
VEGFA-226ENST00000611736 PNRC1Q12796 327 aaPredicted RBP17.26■□□□□ 0.35
VEGFA-226ENST00000611736 WFDC2Q14508 124 aa17.26■□□□□ 0.35
VEGFA-226ENST00000611736 MRPL54Q6P161 138 aaKnown RBP17.26■□□□□ 0.35
VEGFA-226ENST00000611736 CLPSL2Q6UWE3 100 aa17.26■□□□□ 0.35
VEGFA-226ENST00000611736 TRBV6-5A0A0K0K1A5 114 aa17.25■□□□□ 0.35
VEGFA-226ENST00000611736 SMKR1H3BMG3 65 aa17.25■□□□□ 0.35
VEGFA-226ENST00000611736 NCR2O95944 276 aa17.25■□□□□ 0.35
VEGFA-226ENST00000611736 RPS10P46783 165 aaKnown RBP17.25■□□□□ 0.35
VEGFA-226ENST00000611736 Q8N814 137 aa17.25■□□□□ 0.35
VEGFA-226ENST00000611736 BAALCQ8WXS3 180 aa17.25■□□□□ 0.35
VEGFA-226ENST00000611736 ST20Q9HBF5 79 aa17.25■□□□□ 0.35
VEGFA-226ENST00000611736 PPP1R2P9O14990 202 aa17.24■□□□□ 0.35
VEGFA-226ENST00000611736 PMCHP20382 165 aa17.24■□□□□ 0.35
VEGFA-226ENST00000611736 LINC00269Q8N2A0 174 aa17.24■□□□□ 0.35
VEGFA-226ENST00000611736 C1orf43Q9BWL3 253 aa17.24■□□□□ 0.35
VEGFA-226ENST00000611736 A0A1B0GW15 77 aa17.23■□□□□ 0.35
VEGFA-226ENST00000611736 I3L3M4 83 aa17.22■□□□□ 0.35
VEGFA-226ENST00000611736 APCSP02743 223 aa17.22■□□□□ 0.35
VEGFA-226ENST00000611736 FAM104BQ5XKR9 115 aa17.22■□□□□ 0.35
VEGFA-226ENST00000611736 C20orf203Q8NBC4 194 aa17.22■□□□□ 0.35
VEGFA-226ENST00000611736 IGLV4-60A0A075B6I1 120 aa17.21■□□□□ 0.35
VEGFA-226ENST00000611736 MT-ND4LP03901 98 aa17.21■□□□□ 0.35
VEGFA-226ENST00000611736 HBBP68871 147 aa17.21■□□□□ 0.35
VEGFA-226ENST00000611736 MRPL51Q4U2R6 128 aaKnown RBP17.21■□□□□ 0.35
VEGFA-226ENST00000611736 UQCC3Q6UW78 93 aa17.21■□□□□ 0.35
VEGFA-226ENST00000611736 TMEM70Q9BUB7 260 aa17.21■□□□□ 0.35
VEGFA-226ENST00000611736 PRR34Q9NV39 138 aa17.21■□□□□ 0.35
VEGFA-226ENST00000611736 IGLV5-52A0A0A0MRZ9 124 aa17.2■□□□□ 0.34
VEGFA-226ENST00000611736 A0A1B0GUV1 79 aa17.2■□□□□ 0.34
VEGFA-226ENST00000611736 MIAQ16674 131 aa17.2■□□□□ 0.34
VEGFA-226ENST00000611736 A0A1B0GXF2 115 aa17.19■□□□□ 0.34
VEGFA-226ENST00000611736 S100A8P05109 93 aa17.19■□□□□ 0.34
VEGFA-226ENST00000611736 NTN5Q8WTR8 489 aaPredicted RBP17.19■□□□□ 0.34
VEGFA-226ENST00000611736 TMEM242Q9NWH2 141 aa17.19■□□□□ 0.34
VEGFA-226ENST00000611736 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.18■□□□□ 0.34
VEGFA-226ENST00000611736 IGKV2-29A2NJV5 120 aaPredicted RBP17.18■□□□□ 0.34
VEGFA-226ENST00000611736 CDK2AP2O75956 126 aa17.18■□□□□ 0.34
VEGFA-226ENST00000611736 ADCYAP1P18509 176 aa17.18■□□□□ 0.34
VEGFA-226ENST00000611736 NRACQ8N912 160 aa17.18■□□□□ 0.34
VEGFA-226ENST00000611736 ANAPC16Q96DE5 110 aa17.18■□□□□ 0.34
VEGFA-226ENST00000611736 TMEM218A2RU14 115 aa17.17■□□□□ 0.34
VEGFA-226ENST00000611736 F8W036 122 aa17.17■□□□□ 0.34
VEGFA-226ENST00000611736 TSHBP01222 138 aa17.17■□□□□ 0.34
VEGFA-226ENST00000611736 POLR2KP53803 58 aaKnown RBP17.17■□□□□ 0.34
VEGFA-226ENST00000611736 KRTAP10-1P60331 282 aa17.17■□□□□ 0.34
VEGFA-226ENST00000611736 REG3AQ06141 175 aa17.17■□□□□ 0.34
VEGFA-226ENST00000611736 COMMD7Q86VX2 200 aa17.17■□□□□ 0.34
VEGFA-226ENST00000611736 KRTAP17-1Q9BYP8 105 aa17.17■□□□□ 0.34
VEGFA-226ENST00000611736 PPP1R17O96001 155 aa17.16■□□□□ 0.34
VEGFA-226ENST00000611736 GCSHP23434 173 aa17.16■□□□□ 0.34
VEGFA-226ENST00000611736 AMMECR1LQ6DCA0 310 aa17.16■□□□□ 0.34
VEGFA-226ENST00000611736 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-226ENST00000611736 HLA-DQA1P01909 254 aa17.15■□□□□ 0.34
VEGFA-226ENST00000611736 RNASEKQ6P5S7 137 aaKnown RBP17.15■□□□□ 0.34
VEGFA-226ENST00000611736 TRBV27A0A0K0K1C4 114 aa17.14■□□□□ 0.33
VEGFA-226ENST00000611736 CKS2P33552 79 aa17.14■□□□□ 0.33
VEGFA-226ENST00000611736 SUMO2P61956 95 aaKnown RBP17.14■□□□□ 0.33
VEGFA-226ENST00000611736 ATP5L2Q7Z4Y8 100 aa17.14■□□□□ 0.33
VEGFA-226ENST00000611736 IGLV10-54A0A075B6I4 117 aa17.13■□□□□ 0.33
VEGFA-226ENST00000611736 H7C423 109 aa17.12■□□□□ 0.33
VEGFA-226ENST00000611736 VCYO14598 125 aa17.12■□□□□ 0.33
VEGFA-226ENST00000611736 FGF6P10767 208 aa17.12■□□□□ 0.33
VEGFA-226ENST00000611736 LINC00862A6NCI5 91 aa17.11■□□□□ 0.33
VEGFA-226ENST00000611736 D6R8Y8 96 aa17.11■□□□□ 0.33
VEGFA-226ENST00000611736 DNAH8Q96JB1 4490 aa17.1■□□□□ 0.33
VEGFA-226ENST00000611736 ESDP10768 282 aa17.1■□□□□ 0.33
VEGFA-226ENST00000611736 FCER1GP30273 86 aa17.1■□□□□ 0.33
VEGFA-226ENST00000611736 KRTAP26-1Q6PEX3 210 aa17.1■□□□□ 0.33
VEGFA-226ENST00000611736 IGKV3OR2-268A0A0C4DH90 116 aa17.09■□□□□ 0.33
VEGFA-226ENST00000611736 TRAV8-4A0A0B4J246 113 aa17.08■□□□□ 0.32
VEGFA-226ENST00000611736 TNFRSF6BO95407 300 aa17.08■□□□□ 0.32
VEGFA-226ENST00000611736 SEC11CQ9BY50 192 aa17.08■□□□□ 0.32
VEGFA-226ENST00000611736 TRBV24-1A0A075B6N3 115 aa17.07■□□□□ 0.32
VEGFA-226ENST00000611736 C7orf77A4D0Y5 90 aa17.07■□□□□ 0.32
VEGFA-226ENST00000611736 USP17L23D6RBM5 183 aa17.07■□□□□ 0.32
VEGFA-226ENST00000611736 KIR2DL4Q99706 377 aa17.07■□□□□ 0.32
VEGFA-226ENST00000611736 C20orf78Q9BR46 151 aa17.07■□□□□ 0.32
VEGFA-226ENST00000611736 C14orf177Q52M58 125 aa17.06■□□□□ 0.32
VEGFA-226ENST00000611736 BTF3L4Q96K17 158 aa17.06■□□□□ 0.32
VEGFA-226ENST00000611736 NPYP01303 97 aa17.05■□□□□ 0.32
VEGFA-226ENST00000611736 ZNF25P17030 456 aaPredicted RBP17.05■□□□□ 0.32
VEGFA-226ENST00000611736 TMEM101Q96IK0 257 aa17.05■□□□□ 0.32
VEGFA-226ENST00000611736 PPBPP02775 128 aa17.04■□□□□ 0.32
VEGFA-226ENST00000611736 OR5A1Q8NGJ0 315 aa17.04■□□□□ 0.32
VEGFA-226ENST00000611736 ORMDL3Q8N138 153 aa17.03■□□□□ 0.32
VEGFA-226ENST00000611736 CTDSP1Q9GZU7 261 aa17.03■□□□□ 0.32
VEGFA-226ENST00000611736 RPL32P62910 135 aaKnown RBP17.02■□□□□ 0.32
VEGFA-226ENST00000611736 TMEM136Q6ZRR5 245 aa17.02■□□□□ 0.32
VEGFA-226ENST00000611736 IMMP2LQ96T52 175 aa17.02■□□□□ 0.32
VEGFA-226ENST00000611736 SMIM2Q9BVW6 85 aa17.02■□□□□ 0.32
VEGFA-226ENST00000611736 PCLOQ9Y6V0 5065 aa17.01■□□□□ 0.31
VEGFA-226ENST00000611736 PHOX2AO14813 284 aa17.01■□□□□ 0.31
VEGFA-226ENST00000611736 XGP55808 180 aa17.01■□□□□ 0.31
VEGFA-226ENST00000611736 LINC01620Q4KN68 170 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms