RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 DEFB4AO15263 64 aa13.14□□□□□ -0.31
SNAPC3-207ENST00000610884 NOP10Q9NPE3 64 aaKnown RBP13.14□□□□□ -0.31
SNAPC3-207ENST00000610884 TRGV1A0A0A0MS02 117 aa13.14□□□□□ -0.31
SNAPC3-207ENST00000610884 PRSS47A8MTI9 375 aa13.14□□□□□ -0.31
SNAPC3-207ENST00000610884 Q6ZTI0 123 aa13.14□□□□□ -0.31
SNAPC3-207ENST00000610884 CSNK1G2-AS1Q8NCQ2 148 aa13.14□□□□□ -0.31
SNAPC3-207ENST00000610884 SMIM2Q9BVW6 85 aa13.14□□□□□ -0.31
SNAPC3-207ENST00000610884 PLNP26678 52 aa13.13□□□□□ -0.31
SNAPC3-207ENST00000610884 MORN3Q6PF18 240 aaPredicted RBP13.13□□□□□ -0.31
SNAPC3-207ENST00000610884 SYT8Q8NBV8 401 aa13.13□□□□□ -0.31
SNAPC3-207ENST00000610884 HIST1H4GQ99525 98 aa13.13□□□□□ -0.31
SNAPC3-207ENST00000610884 SUMO2P61956 95 aaKnown RBP13.12□□□□□ -0.31
SNAPC3-207ENST00000610884 POM121L12Q8N7R1 296 aa13.12□□□□□ -0.31
SNAPC3-207ENST00000610884 IGLL5B9A064 214 aa13.12□□□□□ -0.31
SNAPC3-207ENST00000610884 ZNF479Q96JC4 524 aa13.12□□□□□ -0.31
SNAPC3-207ENST00000610884 TMEM238C9JI98 176 aa13.11□□□□□ -0.31
SNAPC3-207ENST00000610884 F8VRH5 84 aa13.11□□□□□ -0.31
SNAPC3-207ENST00000610884 M0R2P5 195 aa13.11□□□□□ -0.31
SNAPC3-207ENST00000610884 ZNF415Q09FC8 603 aa13.11□□□□□ -0.31
SNAPC3-207ENST00000610884 MRAP2Q96G30 205 aa13.11□□□□□ -0.31
SNAPC3-207ENST00000610884 E9PLD3 99 aa13.11□□□□□ -0.31
SNAPC3-207ENST00000610884 MGAM2Q2M2H8 2515 aa13.11□□□□□ -0.31
SNAPC3-207ENST00000610884 H7C1H1 209 aa13.1□□□□□ -0.31
SNAPC3-207ENST00000610884 C12orf74Q32Q52 190 aa13.1□□□□□ -0.31
SNAPC3-207ENST00000610884 WFDC9Q8NEX5 89 aa13.1□□□□□ -0.31
SNAPC3-207ENST00000610884 SCGB3A1Q96QR1 104 aa13.1□□□□□ -0.31
SNAPC3-207ENST00000610884 M0QY20 66 aa13.1□□□□□ -0.31
SNAPC3-207ENST00000610884 KRTAP10-11P60412 298 aa13.1□□□□□ -0.31
SNAPC3-207ENST00000610884 CFAP126Q5VTH2 177 aa13.1□□□□□ -0.31
SNAPC3-207ENST00000610884 CHTOPQ9Y3Y2 248 aaKnown RBP13.1□□□□□ -0.31
SNAPC3-207ENST00000610884 PRB2P02812 416 aaPredicted RBP13.09□□□□□ -0.31
SNAPC3-207ENST00000610884 INSL3P51460 131 aa13.09□□□□□ -0.31
SNAPC3-207ENST00000610884 DEFB135Q30KP9 77 aa13.09□□□□□ -0.31
SNAPC3-207ENST00000610884 TAL2Q16559 108 aa13.08□□□□□ -0.31
SNAPC3-207ENST00000610884 OR11H2Q8NH07 326 aa13.08□□□□□ -0.31
SNAPC3-207ENST00000610884 CLUHP3Q96NS8 147 aa13.08□□□□□ -0.31
SNAPC3-207ENST00000610884 TRAV12-1A0A0B4J245 112 aa13.08□□□□□ -0.32
SNAPC3-207ENST00000610884 PLAC8L1A1L4L8 177 aa13.08□□□□□ -0.32
SNAPC3-207ENST00000610884 H3BMG7 143 aa13.08□□□□□ -0.32
SNAPC3-207ENST00000610884 ORMDL2Q53FV1 153 aa13.08□□□□□ -0.32
SNAPC3-207ENST00000610884 MTURNQ8N3F0 131 aa13.08□□□□□ -0.32
SNAPC3-207ENST00000610884 GAGE7O76087 117 aa13.07□□□□□ -0.32
SNAPC3-207ENST00000610884 GAGE12FP0CL80 117 aa13.07□□□□□ -0.32
SNAPC3-207ENST00000610884 GAGE12GP0CL81 117 aa13.07□□□□□ -0.32
SNAPC3-207ENST00000610884 GAGE12IP0CL82 117 aa13.07□□□□□ -0.32
SNAPC3-207ENST00000610884 WFDC2Q14508 124 aa13.07□□□□□ -0.32
SNAPC3-207ENST00000610884 SDHAF1A6NFY7 115 aa13.07□□□□□ -0.32
SNAPC3-207ENST00000610884 CMC4P56277 68 aaPredicted RBP13.07□□□□□ -0.32
SNAPC3-207ENST00000610884 TOMM6Q96B49 74 aa13.07□□□□□ -0.32
SNAPC3-207ENST00000610884 FAM110AQ9BQ89 295 aa13.07□□□□□ -0.32
SNAPC3-207ENST00000610884 TRBV7-3A0A075B6L6 115 aa13.06□□□□□ -0.32
SNAPC3-207ENST00000610884 TENM3Q9P273 2699 aa13.06□□□□□ -0.32
SNAPC3-207ENST00000610884 IGHV3-38A0A0C4DH36 116 aa13.06□□□□□ -0.32
SNAPC3-207ENST00000610884 MYMXA0A1B0GTQ4 84 aa13.06□□□□□ -0.32
SNAPC3-207ENST00000610884 CYSLTR1Q9Y271 337 aa13.06□□□□□ -0.32
SNAPC3-207ENST00000610884 NEXN-AS1Q8NBZ9 246 aa13.05□□□□□ -0.32
SNAPC3-207ENST00000610884 RPL39P62891 51 aaKnown RBP13.05□□□□□ -0.32
SNAPC3-207ENST00000610884 RRN3P1Q2M238 152 aa13.05□□□□□ -0.32
SNAPC3-207ENST00000610884 C2orf66Q6UXQ4 117 aa13.05□□□□□ -0.32
SNAPC3-207ENST00000610884 DEFB130BP0DP73 79 aa13.04□□□□□ -0.32
SNAPC3-207ENST00000610884 DEFB130AP0DP74 79 aa13.04□□□□□ -0.32
SNAPC3-207ENST00000610884 TMEM263Q8WUH6 116 aaKnown RBP13.04□□□□□ -0.32
SNAPC3-207ENST00000610884 BAALCQ8WXS3 180 aa13.04□□□□□ -0.32
SNAPC3-207ENST00000610884 F8W1H4 67 aa13.04□□□□□ -0.32
SNAPC3-207ENST00000610884 IGHV4-30-4P0DP06 118 aa13.04□□□□□ -0.32
SNAPC3-207ENST00000610884 SPANXB1Q9NS25 103 aaPredicted RBP13.04□□□□□ -0.32
SNAPC3-207ENST00000610884 SH2D6Q7Z4S9 175 aa13.03□□□□□ -0.32
SNAPC3-207ENST00000610884 C20orf78Q9BR46 151 aa13.03□□□□□ -0.32
SNAPC3-207ENST00000610884 ETDBQ3ZM63 59 aa13.03□□□□□ -0.32
SNAPC3-207ENST00000610884 MDFIQ99750 246 aa13.02□□□□□ -0.32
SNAPC3-207ENST00000610884 PRADC1Q9BSG0 188 aa13.02□□□□□ -0.32
SNAPC3-207ENST00000610884 GTSF1LQ9H1H1 148 aa13.02□□□□□ -0.32
SNAPC3-207ENST00000610884 POLR2KP53803 58 aaKnown RBP13.02□□□□□ -0.33
SNAPC3-207ENST00000610884 C1QTNF4Q9BXJ3 329 aa13.02□□□□□ -0.33
SNAPC3-207ENST00000610884 TRGV2A0A075B6R0 118 aa13.01□□□□□ -0.33
SNAPC3-207ENST00000610884 PRSS29PA6NIE9 313 aa13.01□□□□□ -0.33
SNAPC3-207ENST00000610884 OPRPNQ99935 248 aaPredicted RBP13.01□□□□□ -0.33
SNAPC3-207ENST00000610884 ZNF815PA8K554 130 aa13□□□□□ -0.33
SNAPC3-207ENST00000610884 A8MWV9 139 aa13□□□□□ -0.33
SNAPC3-207ENST00000610884 SHISA2Q6UWI4 295 aa13□□□□□ -0.33
SNAPC3-207ENST00000610884 IL17DQ8TAD2 202 aa13□□□□□ -0.33
SNAPC3-207ENST00000610884 LINC00467Q9BRT7 94 aa13□□□□□ -0.33
SNAPC3-207ENST00000610884 X6R8D5 127 aa13□□□□□ -0.33
SNAPC3-207ENST00000610884 LOC100131303A0A0U1RQF7 123 aa13□□□□□ -0.33
SNAPC3-207ENST00000610884 GAGE13Q4V321 117 aa13□□□□□ -0.33
SNAPC3-207ENST00000610884 SCGB1D4Q6XE38 83 aa13□□□□□ -0.33
SNAPC3-207ENST00000610884 SPXQ9BT56 116 aa13□□□□□ -0.33
SNAPC3-207ENST00000610884 A0A1B0GWB2 263 aa12.99□□□□□ -0.33
SNAPC3-207ENST00000610884 PLEKHB2Q96CS7 222 aa12.99□□□□□ -0.33
SNAPC3-207ENST00000610884 ZFP2Q6ZN57 461 aa12.99□□□□□ -0.33
SNAPC3-207ENST00000610884 RETNQ9HD89 108 aa12.99□□□□□ -0.33
SNAPC3-207ENST00000610884 PGPEP1Q9NXJ5 209 aa12.99□□□□□ -0.33
SNAPC3-207ENST00000610884 SMAGPQ0VAQ4 97 aa12.98□□□□□ -0.33
SNAPC3-207ENST00000610884 CEMP1Q6PRD7 247 aaPredicted RBP12.98□□□□□ -0.33
SNAPC3-207ENST00000610884 C16orf74Q96GX8 76 aa12.98□□□□□ -0.33
SNAPC3-207ENST00000610884 GAGE12HA6NDE8 117 aa12.97□□□□□ -0.33
SNAPC3-207ENST00000610884 J3QR89 54 aa12.97□□□□□ -0.33
SNAPC3-207ENST00000610884 RS1O15537 224 aa12.97□□□□□ -0.33
SNAPC3-207ENST00000610884 PRO0461Q9UI25 63 aa12.97□□□□□ -0.33
SNAPC3-207ENST00000610884 VCYO14598 125 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms