RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 RS1O15537 224 aa9.85□□□□□ -0.83
NEK3-205ENST00000610828 TMEM170BQ5T4T1 132 aa9.85□□□□□ -0.83
NEK3-205ENST00000610828 RAB37Q96AX2 223 aa9.85□□□□□ -0.83
NEK3-205ENST00000610828 NAA38Q9BRA0 125 aaKnown RBP9.85□□□□□ -0.83
NEK3-205ENST00000610828 IGHV3-53P01767 116 aa9.84□□□□□ -0.83
NEK3-205ENST00000610828 RPL35AP18077 110 aaKnown RBP9.84□□□□□ -0.83
NEK3-205ENST00000610828 KRTAP10-3P60369 221 aa9.84□□□□□ -0.83
NEK3-205ENST00000610828 ZNRF2Q8NHG8 242 aa9.84□□□□□ -0.83
NEK3-205ENST00000610828 RNASE8Q8TDE3 154 aaKnown RBP9.84□□□□□ -0.83
NEK3-205ENST00000610828 INAFM1C9JVW0 142 aa9.83□□□□□ -0.84
NEK3-205ENST00000610828 PF4P02776 101 aa9.83□□□□□ -0.84
NEK3-205ENST00000610828 HERVK_113P61574 105 aa9.83□□□□□ -0.84
NEK3-205ENST00000610828 CEND1Q8N111 149 aa9.83□□□□□ -0.84
NEK3-205ENST00000610828 TMEM263Q8WUH6 116 aaKnown RBP9.83□□□□□ -0.84
NEK3-205ENST00000610828 HIST1H4GQ99525 98 aa9.83□□□□□ -0.84
NEK3-205ENST00000610828 C19orf73Q9NVV2 129 aa9.83□□□□□ -0.84
NEK3-205ENST00000610828 IGLV4-3A0A075B6K6 122 aa9.82□□□□□ -0.84
NEK3-205ENST00000610828 ZNF815PA8K554 130 aa9.82□□□□□ -0.84
NEK3-205ENST00000610828 H3BUT2 72 aa9.82□□□□□ -0.84
NEK3-205ENST00000610828 GIG44P09565 113 aaPredicted RBP9.82□□□□□ -0.84
NEK3-205ENST00000610828 NDUFA11Q86Y39 141 aa9.82□□□□□ -0.84
NEK3-205ENST00000610828 IL17DQ8TAD2 202 aa9.82□□□□□ -0.84
NEK3-205ENST00000610828 FAM110AQ9BQ89 295 aa9.82□□□□□ -0.84
NEK3-205ENST00000610828 VCX2Q9H322 139 aa9.82□□□□□ -0.84
NEK3-205ENST00000610828 IGHV3-38A0A0C4DH36 116 aa9.82□□□□□ -0.84
NEK3-205ENST00000610828 C9orf118A6NHY6 69 aa9.82□□□□□ -0.84
NEK3-205ENST00000610828 PHLDA1Q8WV24 401 aaPredicted RBP9.82□□□□□ -0.84
NEK3-205ENST00000610828 CEMP1Q6PRD7 247 aaPredicted RBP9.81□□□□□ -0.84
NEK3-205ENST00000610828 Q6ZTI0 123 aa9.81□□□□□ -0.84
NEK3-205ENST00000610828 TM2D2Q9BX73 214 aa9.81□□□□□ -0.84
NEK3-205ENST00000610828 SMIM13P0DJ93 91 aa9.81□□□□□ -0.84
NEK3-205ENST00000610828 SCGB1D4Q6XE38 83 aa9.81□□□□□ -0.84
NEK3-205ENST00000610828 ZNF479Q96JC4 524 aa9.81□□□□□ -0.84
NEK3-205ENST00000610828 DNAJC30Q96LL9 226 aa9.81□□□□□ -0.84
NEK3-205ENST00000610828 TAL2Q16559 108 aa9.8□□□□□ -0.84
NEK3-205ENST00000610828 NOP10Q9NPE3 64 aaKnown RBP9.8□□□□□ -0.84
NEK3-205ENST00000610828 NHP2Q9NX24 153 aaKnown RBP9.8□□□□□ -0.84
NEK3-205ENST00000610828 NFE4Q86UQ8 179 aa9.8□□□□□ -0.84
NEK3-205ENST00000610828 PYGO1Q9Y3Y4 419 aa9.8□□□□□ -0.84
NEK3-205ENST00000610828 GAGE10A6NGK3 116 aa9.79□□□□□ -0.84
NEK3-205ENST00000610828 K7ERJ3 54 aa9.79□□□□□ -0.84
NEK3-205ENST00000610828 CHCHD7Q9BUK0 85 aa9.79□□□□□ -0.84
NEK3-205ENST00000610828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.79□□□□□ -0.84
NEK3-205ENST00000610828 IGKV2-29A2NJV5 120 aaPredicted RBP9.79□□□□□ -0.84
NEK3-205ENST00000610828 RNASE13Q5GAN3 156 aaKnown RBP9.79□□□□□ -0.84
NEK3-205ENST00000610828 PLEKHB2Q96CS7 222 aa9.79□□□□□ -0.84
NEK3-205ENST00000610828 C1QTNF4Q9BXJ3 329 aa9.79□□□□□ -0.84
NEK3-205ENST00000610828 NSD1Q96L73 2696 aaPredicted RBP9.78□□□□□ -0.84
NEK3-205ENST00000610828 FN1P02751 2386 aaKnown RBP9.78□□□□□ -0.84
NEK3-205ENST00000610828 A0A0J9YXV3 536 aa9.78□□□□□ -0.84
NEK3-205ENST00000610828 LINC00482Q8N8I6 264 aa9.78□□□□□ -0.84
NEK3-205ENST00000610828 C2CD3Q4AC94 2353 aa9.78□□□□□ -0.84
NEK3-205ENST00000610828 TRBV7-3A0A075B6L6 115 aa9.78□□□□□ -0.84
NEK3-205ENST00000610828 TSPEAR-AS2P59090 65 aa9.78□□□□□ -0.84
NEK3-205ENST00000610828 FAM104AQ969W3 186 aa9.78□□□□□ -0.84
NEK3-205ENST00000610828 C16orf74Q96GX8 76 aa9.78□□□□□ -0.84
NEK3-205ENST00000610828 AMELXQ99217 191 aa9.77□□□□□ -0.85
NEK3-205ENST00000610828 UBE2D4Q9Y2X8 147 aa9.77□□□□□ -0.85
NEK3-205ENST00000610828 TRAV4A0A0B4J268 109 aa9.77□□□□□ -0.85
NEK3-205ENST00000610828 GAGE12BA1L429 117 aa9.77□□□□□ -0.85
NEK3-205ENST00000610828 ZNF22P17026 224 aaPredicted RBP9.77□□□□□ -0.85
NEK3-205ENST00000610828 CSNK1G2-AS1Q8NCQ2 148 aa9.77□□□□□ -0.85
NEK3-205ENST00000610828 IGHV3-64A0A075B6Q5 118 aa9.76□□□□□ -0.85
NEK3-205ENST00000610828 J3QQQ9 107 aa9.76□□□□□ -0.85
NEK3-205ENST00000610828 K7EQD1 137 aa9.76□□□□□ -0.85
NEK3-205ENST00000610828 DAZ2Q13117 558 aaKnown RBP9.76□□□□□ -0.85
NEK3-205ENST00000610828 RRN3P1Q2M238 152 aa9.76□□□□□ -0.85
NEK3-205ENST00000610828 GTF2H5Q6ZYL4 71 aa9.76□□□□□ -0.85
NEK3-205ENST00000610828 SPANXA1Q9NS26 97 aa9.76□□□□□ -0.85
NEK3-205ENST00000610828 TMEM223A0PJW6 202 aa9.75□□□□□ -0.85
NEK3-205ENST00000610828 PLAC8L1A1L4L8 177 aa9.75□□□□□ -0.85
NEK3-205ENST00000610828 SRSF9Q13242 221 aaKnown RBP eCLIP9.75□□□□□ -0.85
NEK3-205ENST00000610828 TRGV2A0A075B6R0 118 aa9.75□□□□□ -0.85
NEK3-205ENST00000610828 A0A1W2PPM0 123 aa9.75□□□□□ -0.85
NEK3-205ENST00000610828 GAGE7O76087 117 aa9.75□□□□□ -0.85
NEK3-205ENST00000610828 GAGE12FP0CL80 117 aa9.75□□□□□ -0.85
NEK3-205ENST00000610828 GAGE12GP0CL81 117 aa9.75□□□□□ -0.85
NEK3-205ENST00000610828 GAGE12IP0CL82 117 aa9.75□□□□□ -0.85
NEK3-205ENST00000610828 LGALS3P17931 250 aaKnown RBP9.75□□□□□ -0.85
NEK3-205ENST00000610828 CRYBA4P53673 196 aa9.75□□□□□ -0.85
NEK3-205ENST00000610828 RPL36AP83881 106 aaKnown RBP9.75□□□□□ -0.85
NEK3-205ENST00000610828 SLC25A29Q8N8R3 303 aa9.75□□□□□ -0.85
NEK3-205ENST00000610828 RPL36ALQ969Q0 106 aaKnown RBP9.75□□□□□ -0.85
NEK3-205ENST00000610828 K7EP34 96 aa9.74□□□□□ -0.85
NEK3-205ENST00000610828 SAMD5Q5TGI4 173 aa9.74□□□□□ -0.85
NEK3-205ENST00000610828 VWFP04275 2813 aa9.74□□□□□ -0.85
NEK3-205ENST00000610828 HIVEP1P15822 2718 aa9.74□□□□□ -0.85
NEK3-205ENST00000610828 C12orf74Q32Q52 190 aa9.74□□□□□ -0.85
NEK3-205ENST00000610828 Q6ZUT4 128 aa9.74□□□□□ -0.85
NEK3-205ENST00000610828 A0A0J9YY99 117 aa9.73□□□□□ -0.85
NEK3-205ENST00000610828 TRBV10-1A0A0K0K1A3 114 aa9.73□□□□□ -0.85
NEK3-205ENST00000610828 RBX1P62877 108 aa9.73□□□□□ -0.85
NEK3-205ENST00000610828 MRPS36P82909 103 aaKnown RBP9.73□□□□□ -0.85
NEK3-205ENST00000610828 SPCS1Q9Y6A9 102 aa9.73□□□□□ -0.85
NEK3-205ENST00000610828 LEPROTO15243 131 aa9.73□□□□□ -0.85
NEK3-205ENST00000610828 FABP2P12104 132 aa9.73□□□□□ -0.85
NEK3-205ENST00000610828 GAGE12JA6NER3 117 aa9.72□□□□□ -0.85
NEK3-205ENST00000610828 GAGE4Q13068 117 aa9.72□□□□□ -0.85
NEK3-205ENST00000610828 GAGE5Q13069 117 aa9.72□□□□□ -0.85
NEK3-205ENST00000610828 RNF151Q2KHN1 245 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms