RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 SRSF3P84103 164 aaKnown RBP12.68□□□□□ -0.38
TCF3-219ENST00000610756 COTL1Q14019 142 aa12.68□□□□□ -0.38
TCF3-219ENST00000610756 LINC00269Q8N2A0 174 aa12.68□□□□□ -0.38
TCF3-219ENST00000610756 ISOC2Q96AB3 205 aa12.68□□□□□ -0.38
TCF3-219ENST00000610756 V9GYV3 84 aa12.68□□□□□ -0.38
TCF3-219ENST00000610756 RPL23P62829 140 aaKnown RBP12.67□□□□□ -0.38
TCF3-219ENST00000610756 RPL39LQ96EH5 51 aaKnown RBP12.66□□□□□ -0.38
TCF3-219ENST00000610756 TMEM191AQ9H0A3 160 aa12.66□□□□□ -0.38
TCF3-219ENST00000610756 NAT8Q9UHE5 227 aa12.66□□□□□ -0.38
TCF3-219ENST00000610756 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.65□□□□□ -0.38
TCF3-219ENST00000610756 C20orf203Q8NBC4 194 aa12.65□□□□□ -0.38
TCF3-219ENST00000610756 DEFB104AQ8WTQ1 72 aa12.65□□□□□ -0.38
TCF3-219ENST00000610756 DNAH8Q96JB1 4490 aa12.64□□□□□ -0.39
TCF3-219ENST00000610756 TRBV6-5A0A0K0K1A5 114 aa12.64□□□□□ -0.39
TCF3-219ENST00000610756 AMTP48728 403 aa12.64□□□□□ -0.39
TCF3-219ENST00000610756 REG3AQ06141 175 aa12.64□□□□□ -0.39
TCF3-219ENST00000610756 C14orf177Q52M58 125 aa12.64□□□□□ -0.39
TCF3-219ENST00000610756 NUP35Q8NFH5 326 aa12.64□□□□□ -0.39
TCF3-219ENST00000610756 IGLV4-60A0A075B6I1 120 aa12.63□□□□□ -0.39
TCF3-219ENST00000610756 SDHAF1A6NFY7 115 aa12.63□□□□□ -0.39
TCF3-219ENST00000610756 UBE2L6O14933 153 aa12.63□□□□□ -0.39
TCF3-219ENST00000610756 NCR2O95944 276 aa12.63□□□□□ -0.39
TCF3-219ENST00000610756 ADIRFQ15847 76 aa12.63□□□□□ -0.39
TCF3-219ENST00000610756 KRTAP26-1Q6PEX3 210 aa12.63□□□□□ -0.39
TCF3-219ENST00000610756 FAM30AQ9NZY2 134 aa12.63□□□□□ -0.39
TCF3-219ENST00000610756 TRAV8-4A0A0B4J246 113 aa12.62□□□□□ -0.39
TCF3-219ENST00000610756 EPM2AB3EWF7 344 aa12.62□□□□□ -0.39
TCF3-219ENST00000610756 RAB4AP20338 218 aa12.62□□□□□ -0.39
TCF3-219ENST00000610756 RIGQ13278 110 aa12.62□□□□□ -0.39
TCF3-219ENST00000610756 RNF185Q96GF1 192 aa12.62□□□□□ -0.39
TCF3-219ENST00000610756 NAT8BQ9UHF3 227 aa12.62□□□□□ -0.39
TCF3-219ENST00000610756 FAT1Q14517 4588 aa12.62□□□□□ -0.39
TCF3-219ENST00000610756 CLPSL2Q6UWE3 100 aa12.62□□□□□ -0.39
TCF3-219ENST00000610756 H7C423 109 aa12.61□□□□□ -0.39
TCF3-219ENST00000610756 I3L3M4 83 aa12.61□□□□□ -0.39
TCF3-219ENST00000610756 GAS8-AS1O95177 125 aa12.61□□□□□ -0.39
TCF3-219ENST00000610756 Q6ZSA8 131 aa12.61□□□□□ -0.39
TCF3-219ENST00000610756 SMIM27A0A1W2PRY6 76 aa12.6□□□□□ -0.39
TCF3-219ENST00000610756 USP17L23D6RBM5 183 aa12.6□□□□□ -0.39
TCF3-219ENST00000610756 PMCHP20382 165 aa12.6□□□□□ -0.39
TCF3-219ENST00000610756 MRAP2Q96G30 205 aa12.6□□□□□ -0.39
TCF3-219ENST00000610756 HLA-DQA1P01909 254 aa12.59□□□□□ -0.39
TCF3-219ENST00000610756 AMN1Q8IY45 258 aa12.59□□□□□ -0.39
TCF3-219ENST00000610756 ST20Q9HBF5 79 aa12.59□□□□□ -0.39
TCF3-219ENST00000610756 APCSP02743 223 aa12.58□□□□□ -0.4
TCF3-219ENST00000610756 SMR3BP02814 79 aaPredicted RBP12.58□□□□□ -0.4
TCF3-219ENST00000610756 POLR2KP53803 58 aaKnown RBP12.58□□□□□ -0.4
TCF3-219ENST00000610756 IGLV10-54A0A075B6I4 117 aa12.57□□□□□ -0.4
TCF3-219ENST00000610756 HAMPP81172 84 aa12.57□□□□□ -0.4
TCF3-219ENST00000610756 LINC01620Q4KN68 170 aa12.57□□□□□ -0.4
TCF3-219ENST00000610756 DGAT2L7PQ6IED9 249 aa12.57□□□□□ -0.4
TCF3-219ENST00000610756 TRBV27A0A0K0K1C4 114 aa12.56□□□□□ -0.4
TCF3-219ENST00000610756 PRSS1P07477 247 aa12.56□□□□□ -0.4
TCF3-219ENST00000610756 RPS10P46783 165 aaKnown RBP12.56□□□□□ -0.4
TCF3-219ENST00000610756 Q5VSD8 79 aa12.56□□□□□ -0.4
TCF3-219ENST00000610756 VPS13BQ7Z7G8 4022 aa12.56□□□□□ -0.4
TCF3-219ENST00000610756 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.55□□□□□ -0.4
TCF3-219ENST00000610756 A0A1B0GW15 77 aa12.55□□□□□ -0.4
TCF3-219ENST00000610756 IGKV2-29A2NJV5 120 aaPredicted RBP12.55□□□□□ -0.4
TCF3-219ENST00000610756 FAM229AH3BQW9 127 aa12.55□□□□□ -0.4
TCF3-219ENST00000610756 PPP1R17O96001 155 aa12.55□□□□□ -0.4
TCF3-219ENST00000610756 ESDP10768 282 aa12.55□□□□□ -0.4
TCF3-219ENST00000610756 RAB14P61106 215 aa12.55□□□□□ -0.4
TCF3-219ENST00000610756 AMMECR1LQ6DCA0 310 aa12.55□□□□□ -0.4
TCF3-219ENST00000610756 CLRN3Q8NCR9 226 aa12.55□□□□□ -0.4
TCF3-219ENST00000610756 TSHBP01222 138 aa12.54□□□□□ -0.4
TCF3-219ENST00000610756 FGF6P10767 208 aa12.54□□□□□ -0.4
TCF3-219ENST00000610756 FAM104BQ5XKR9 115 aa12.54□□□□□ -0.4
TCF3-219ENST00000610756 VCYO14598 125 aa12.53□□□□□ -0.4
TCF3-219ENST00000610756 ZNF25P17030 456 aaPredicted RBP12.53□□□□□ -0.4
TCF3-219ENST00000610756 RNASEKQ6P5S7 137 aaKnown RBP12.53□□□□□ -0.4
TCF3-219ENST00000610756 LINC00862A6NCI5 91 aa12.52□□□□□ -0.41
TCF3-219ENST00000610756 CAMPP49913 170 aa12.52□□□□□ -0.41
TCF3-219ENST00000610756 NRACQ8N912 160 aa12.52□□□□□ -0.41
TCF3-219ENST00000610756 SRRM2Q9UQ35 2752 aaKnown RBP12.51□□□□□ -0.41
TCF3-219ENST00000610756 SMKR1H3BMG3 65 aa12.51□□□□□ -0.41
TCF3-219ENST00000610756 MRPL51Q4U2R6 128 aaKnown RBP12.51□□□□□ -0.41
TCF3-219ENST00000610756 TMEM242Q9NWH2 141 aa12.51□□□□□ -0.41
TCF3-219ENST00000610756 SUMO2P61956 95 aaKnown RBP12.5□□□□□ -0.41
TCF3-219ENST00000610756 C9orf163Q8N9P6 203 aa12.5□□□□□ -0.41
TCF3-219ENST00000610756 BTF3L4Q96K17 158 aa12.5□□□□□ -0.41
TCF3-219ENST00000610756 CHAC1Q9BUX1 264 aa12.5□□□□□ -0.41
TCF3-219ENST00000610756 TRBV24-1A0A075B6N3 115 aa12.49□□□□□ -0.41
TCF3-219ENST00000610756 PPP1R2P9O14990 202 aa12.49□□□□□ -0.41
TCF3-219ENST00000610756 S100A8P05109 93 aa12.49□□□□□ -0.41
TCF3-219ENST00000610756 INAFM2P0DMQ5 153 aa12.49□□□□□ -0.41
TCF3-219ENST00000610756 MRPL52Q86TS9 123 aaKnown RBP12.49□□□□□ -0.41
TCF3-219ENST00000610756 TMEM101Q96IK0 257 aa12.49□□□□□ -0.41
TCF3-219ENST00000610756 A0A1B0GXF2 115 aa12.48□□□□□ -0.41
TCF3-219ENST00000610756 SCXQ7RTU7 201 aa12.48□□□□□ -0.41
TCF3-219ENST00000610756 OR5A1Q8NGJ0 315 aa12.48□□□□□ -0.41
TCF3-219ENST00000610756 C20orf78Q9BR46 151 aa12.48□□□□□ -0.41
TCF3-219ENST00000610756 IGKV3OR2-268A0A0C4DH90 116 aa12.47□□□□□ -0.41
TCF3-219ENST00000610756 GAGE12HA6NDE8 117 aa12.47□□□□□ -0.41
TCF3-219ENST00000610756 F8W036 122 aa12.47□□□□□ -0.41
TCF3-219ENST00000610756 CKS2P33552 79 aa12.47□□□□□ -0.41
TCF3-219ENST00000610756 CNBPP62633 177 aaKnown RBP12.47□□□□□ -0.41
TCF3-219ENST00000610756 HBBP68871 147 aa12.47□□□□□ -0.41
TCF3-219ENST00000610756 PNRC1Q12796 327 aaPredicted RBP12.47□□□□□ -0.41
TCF3-219ENST00000610756 CLLU1Q5K131 121 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms