RNA–Protein interactions for RNA: ENST00000607836.1

AC009961.1-203, humanhuman

TSL 1 (best) BASIC

Gene AC009961.1, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.1-203ENST00000607836 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.03□□□□□ -0.64
AC009961.1-203ENST00000607836 IGKV2-29A2NJV5 120 aaPredicted RBP11.03□□□□□ -0.64
AC009961.1-203ENST00000607836 TIMM17AQ99595 171 aa11.02□□□□□ -0.64
AC009961.1-203ENST00000607836 RNASE8Q8TDE3 154 aaKnown RBP11.02□□□□□ -0.65
AC009961.1-203ENST00000607836 NDUFA7O95182 113 aa11.01□□□□□ -0.65
AC009961.1-203ENST00000607836 SEC11AP67812 179 aa11.01□□□□□ -0.65
AC009961.1-203ENST00000607836 PLEKHB2Q96CS7 222 aa11.01□□□□□ -0.65
AC009961.1-203ENST00000607836 H3BUT2 72 aa11.01□□□□□ -0.65
AC009961.1-203ENST00000607836 OR4C5Q8NGB2 326 aa11.01□□□□□ -0.65
AC009961.1-203ENST00000607836 TMEM141Q96I45 108 aa11.01□□□□□ -0.65
AC009961.1-203ENST00000607836 MYMXA0A1B0GTQ4 84 aa11□□□□□ -0.65
AC009961.1-203ENST00000607836 ZNF815PA8K554 130 aa11□□□□□ -0.65
AC009961.1-203ENST00000607836 UBE2V1Q13404 147 aa11□□□□□ -0.65
AC009961.1-203ENST00000607836 RHOHQ15669 191 aa11□□□□□ -0.65
AC009961.1-203ENST00000607836 SPXQ9BT56 116 aa11□□□□□ -0.65
AC009961.1-203ENST00000607836 IGLV4-3A0A075B6K6 122 aa11□□□□□ -0.65
AC009961.1-203ENST00000607836 A0A0J9YXV3 536 aa11□□□□□ -0.65
AC009961.1-203ENST00000607836 TSPEAR-AS2P59090 65 aa11□□□□□ -0.65
AC009961.1-203ENST00000607836 HIST1H4GQ99525 98 aa11□□□□□ -0.65
AC009961.1-203ENST00000607836 NHP2Q9NX24 153 aaKnown RBP11□□□□□ -0.65
AC009961.1-203ENST00000607836 E9PLD3 99 aa10.99□□□□□ -0.65
AC009961.1-203ENST00000607836 BEAN1Q3B7T3 259 aa10.99□□□□□ -0.65
AC009961.1-203ENST00000607836 FAM104AQ969W3 186 aa10.99□□□□□ -0.65
AC009961.1-203ENST00000607836 A6NDN8 102 aa10.99□□□□□ -0.65
AC009961.1-203ENST00000607836 RS1O15537 224 aa10.99□□□□□ -0.65
AC009961.1-203ENST00000607836 GAGE12BA1L429 117 aa10.98□□□□□ -0.65
AC009961.1-203ENST00000607836 GAGE7O76087 117 aa10.98□□□□□ -0.65
AC009961.1-203ENST00000607836 GAGE12FP0CL80 117 aa10.98□□□□□ -0.65
AC009961.1-203ENST00000607836 GAGE12GP0CL81 117 aa10.98□□□□□ -0.65
AC009961.1-203ENST00000607836 GAGE12IP0CL82 117 aa10.98□□□□□ -0.65
AC009961.1-203ENST00000607836 LINC00467Q9BRT7 94 aa10.98□□□□□ -0.65
AC009961.1-203ENST00000607836 VCX2Q9H322 139 aa10.98□□□□□ -0.65
AC009961.1-203ENST00000607836 SCGB1D4Q6XE38 83 aa10.98□□□□□ -0.65
AC009961.1-203ENST00000607836 CEND1Q8N111 149 aa10.98□□□□□ -0.65
AC009961.1-203ENST00000607836 HIGD1BQ9P298 99 aa10.98□□□□□ -0.65
AC009961.1-203ENST00000607836 CLUHP3Q96NS8 147 aa10.97□□□□□ -0.65
AC009961.1-203ENST00000607836 CHCHD7Q9BUK0 85 aa10.97□□□□□ -0.65
AC009961.1-203ENST00000607836 TMEM263Q8WUH6 116 aaKnown RBP10.97□□□□□ -0.65
AC009961.1-203ENST00000607836 RHODO00212 210 aa10.96□□□□□ -0.65
AC009961.1-203ENST00000607836 NDUFA11Q86Y39 141 aa10.96□□□□□ -0.65
AC009961.1-203ENST00000607836 LINC00482Q8N8I6 264 aa10.96□□□□□ -0.65
AC009961.1-203ENST00000607836 LOC100131303A0A0U1RQF7 123 aa10.95□□□□□ -0.66
AC009961.1-203ENST00000607836 PLAC8L1A1L4L8 177 aa10.95□□□□□ -0.66
AC009961.1-203ENST00000607836 IL17DQ8TAD2 202 aa10.95□□□□□ -0.66
AC009961.1-203ENST00000607836 TRGV2A0A075B6R0 118 aa10.95□□□□□ -0.66
AC009961.1-203ENST00000607836 GAGE12JA6NER3 117 aa10.95□□□□□ -0.66
AC009961.1-203ENST00000607836 H3BRM9 83 aa10.95□□□□□ -0.66
AC009961.1-203ENST00000607836 GAGE4Q13068 117 aa10.95□□□□□ -0.66
AC009961.1-203ENST00000607836 GAGE5Q13069 117 aa10.95□□□□□ -0.66
AC009961.1-203ENST00000607836 GAGE13Q4V321 117 aa10.95□□□□□ -0.66
AC009961.1-203ENST00000607836 SLC25A29Q8N8R3 303 aa10.95□□□□□ -0.66
AC009961.1-203ENST00000607836 C9orf118A6NHY6 69 aa10.94□□□□□ -0.66
AC009961.1-203ENST00000607836 COTL1Q14019 142 aa10.94□□□□□ -0.66
AC009961.1-203ENST00000607836 CSNK1G2-AS1Q8NCQ2 148 aa10.94□□□□□ -0.66
AC009961.1-203ENST00000607836 EDA2RQ9HAV5 297 aa10.94□□□□□ -0.66
AC009961.1-203ENST00000607836 Q6ZUT4 128 aa10.94□□□□□ -0.66
AC009961.1-203ENST00000607836 SMIM13P0DJ93 91 aa10.93□□□□□ -0.66
AC009961.1-203ENST00000607836 ZNF22P17026 224 aaPredicted RBP10.93□□□□□ -0.66
AC009961.1-203ENST00000607836 PIK3CD-AS1Q5SR53 167 aa10.93□□□□□ -0.66
AC009961.1-203ENST00000607836 LINC01549A6NIU2 74 aa10.93□□□□□ -0.66
AC009961.1-203ENST00000607836 A8MZ25 164 aa10.93□□□□□ -0.66
AC009961.1-203ENST00000607836 LINC00694P0DN24 101 aa10.93□□□□□ -0.66
AC009961.1-203ENST00000607836 HERVK_113P61574 105 aa10.93□□□□□ -0.66
AC009961.1-203ENST00000607836 RRN3P1Q2M238 152 aa10.93□□□□□ -0.66
AC009961.1-203ENST00000607836 UBE2D4Q9Y2X8 147 aa10.93□□□□□ -0.66
AC009961.1-203ENST00000607836 TRAV8-3A0A0A6YYJ7 113 aa10.92□□□□□ -0.66
AC009961.1-203ENST00000607836 SRSF9Q13242 221 aaKnown RBP eCLIP10.92□□□□□ -0.66
AC009961.1-203ENST00000607836 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.92□□□□□ -0.66
AC009961.1-203ENST00000607836 PTH2Q96A98 100 aa10.92□□□□□ -0.66
AC009961.1-203ENST00000607836 TM2D2Q9BX73 214 aa10.92□□□□□ -0.66
AC009961.1-203ENST00000607836 TRBV7-3A0A075B6L6 115 aa10.92□□□□□ -0.66
AC009961.1-203ENST00000607836 PAPPA-AS1Q5QFB9 102 aa10.92□□□□□ -0.66
AC009961.1-203ENST00000607836 J3QQQ9 107 aa10.91□□□□□ -0.66
AC009961.1-203ENST00000607836 GAGE10A6NGK3 116 aa10.91□□□□□ -0.66
AC009961.1-203ENST00000607836 K7EQD1 137 aa10.91□□□□□ -0.66
AC009961.1-203ENST00000607836 CRLF1O75462 422 aa10.91□□□□□ -0.66
AC009961.1-203ENST00000607836 DEFB130BP0DP73 79 aa10.91□□□□□ -0.66
AC009961.1-203ENST00000607836 DEFB130AP0DP74 79 aa10.91□□□□□ -0.66
AC009961.1-203ENST00000607836 TMEM223A0PJW6 202 aa10.9□□□□□ -0.66
AC009961.1-203ENST00000607836 NFE4Q86UQ8 179 aa10.9□□□□□ -0.66
AC009961.1-203ENST00000607836 SFTA2Q6UW10 78 aa10.9□□□□□ -0.67
AC009961.1-203ENST00000607836 NTM-AS1Q6ZSK4 140 aa10.9□□□□□ -0.67
AC009961.1-203ENST00000607836 C16orf74Q96GX8 76 aa10.9□□□□□ -0.67
AC009961.1-203ENST00000607836 TRAV4A0A0B4J268 109 aa10.89□□□□□ -0.67
AC009961.1-203ENST00000607836 DEFB4AO15263 64 aa10.89□□□□□ -0.67
AC009961.1-203ENST00000607836 LGALS3P17931 250 aaKnown RBP10.89□□□□□ -0.67
AC009961.1-203ENST00000607836 CMC4P56277 68 aaPredicted RBP10.89□□□□□ -0.67
AC009961.1-203ENST00000607836 AMELXQ99217 191 aa10.89□□□□□ -0.67
AC009961.1-203ENST00000607836 C12orf74Q32Q52 190 aa10.89□□□□□ -0.67
AC009961.1-203ENST00000607836 SAMD5Q5TGI4 173 aa10.89□□□□□ -0.67
AC009961.1-203ENST00000607836 PYGO1Q9Y3Y4 419 aa10.89□□□□□ -0.67
AC009961.1-203ENST00000607836 STAB1Q9NY15 2570 aa10.88□□□□□ -0.67
AC009961.1-203ENST00000607836 A0A0J9YY99 117 aa10.88□□□□□ -0.67
AC009961.1-203ENST00000607836 RPL36AP83881 106 aaKnown RBP10.88□□□□□ -0.67
AC009961.1-203ENST00000607836 DGAT2L7PQ6IED9 249 aa10.88□□□□□ -0.67
AC009961.1-203ENST00000607836 RPL36ALQ969Q0 106 aaKnown RBP10.88□□□□□ -0.67
AC009961.1-203ENST00000607836 DNAJC30Q96LL9 226 aa10.88□□□□□ -0.67
AC009961.1-203ENST00000607836 FBN1P35555 2871 aaKnown RBP10.88□□□□□ -0.67
AC009961.1-203ENST00000607836 A0A1W2PPM0 123 aa10.88□□□□□ -0.67
AC009961.1-203ENST00000607836 SPINK8P0C7L1 97 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms