RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 DPH3P1Q9H4G8 78 aa14.04□□□□□ -0.16
TMEM248-207ENST00000607045 IGLV10-54A0A075B6I4 117 aa14.03□□□□□ -0.16
TMEM248-207ENST00000607045 CEBPGP53567 150 aa14.03□□□□□ -0.16
TMEM248-207ENST00000607045 SERTAD4-AS1Q5TG53 156 aa14.03□□□□□ -0.16
TMEM248-207ENST00000607045 SUMO4Q6EEV6 95 aa14.03□□□□□ -0.16
TMEM248-207ENST00000607045 SDIM1Q6ZPB5 146 aa14.03□□□□□ -0.16
TMEM248-207ENST00000607045 IGHV1-24A0A0C4DH33 117 aa14.02□□□□□ -0.17
TMEM248-207ENST00000607045 NTF3P20783 257 aa14.02□□□□□ -0.17
TMEM248-207ENST00000607045 TWIST1Q15672 202 aa14.02□□□□□ -0.17
TMEM248-207ENST00000607045 OCC1Q8TAD7 63 aa14.02□□□□□ -0.17
TMEM248-207ENST00000607045 REG3AQ06141 175 aa14.01□□□□□ -0.17
TMEM248-207ENST00000607045 C20orf203Q8NBC4 194 aa14.01□□□□□ -0.17
TMEM248-207ENST00000607045 CTRLP40313 264 aa14□□□□□ -0.17
TMEM248-207ENST00000607045 NKX2-5P52952 324 aaPredicted RBP14□□□□□ -0.17
TMEM248-207ENST00000607045 RASL11AQ6T310 242 aa14□□□□□ -0.17
TMEM248-207ENST00000607045 LYPD6BQ8NI32 183 aa14□□□□□ -0.17
TMEM248-207ENST00000607045 BORCS7Q96B45 105 aa14□□□□□ -0.17
TMEM248-207ENST00000607045 GFRA4Q9GZZ7 299 aa14□□□□□ -0.17
TMEM248-207ENST00000607045 RNASE7Q9H1E1 156 aaKnown RBP14□□□□□ -0.17
TMEM248-207ENST00000607045 IGLV4-60A0A075B6I1 120 aa13.99□□□□□ -0.17
TMEM248-207ENST00000607045 GATCO43716 136 aaKnown RBP13.99□□□□□ -0.17
TMEM248-207ENST00000607045 A8MWL6 223 aa13.98□□□□□ -0.17
TMEM248-207ENST00000607045 NDUFS6O75380 124 aaKnown RBP13.98□□□□□ -0.17
TMEM248-207ENST00000607045 CLRN3Q8NCR9 226 aa13.98□□□□□ -0.17
TMEM248-207ENST00000607045 SLPIP03973 132 aa13.97□□□□□ -0.17
TMEM248-207ENST00000607045 SMIM7Q9BQ49 75 aa13.97□□□□□ -0.17
TMEM248-207ENST00000607045 NIT2Q9NQR4 276 aa13.97□□□□□ -0.17
TMEM248-207ENST00000607045 A0A1B0GUV1 79 aa13.96□□□□□ -0.17
TMEM248-207ENST00000607045 K7EN84 100 aa13.96□□□□□ -0.17
TMEM248-207ENST00000607045 FAM231DQ6ZW35 169 aa13.96□□□□□ -0.17
TMEM248-207ENST00000607045 CNFNQ9BYD5 112 aa13.96□□□□□ -0.17
TMEM248-207ENST00000607045 hDV102S1A0JD36 115 aa13.95□□□□□ -0.18
TMEM248-207ENST00000607045 TEX261Q6UWH6 196 aa13.95□□□□□ -0.18
TMEM248-207ENST00000607045 FAM210AQ96ND0 272 aa13.95□□□□□ -0.18
TMEM248-207ENST00000607045 TMEM243Q9BU79 118 aa13.95□□□□□ -0.18
TMEM248-207ENST00000607045 TRAV8-4A0A0B4J246 113 aa13.94□□□□□ -0.18
TMEM248-207ENST00000607045 ZNF727A8MUV8 499 aa13.94□□□□□ -0.18
TMEM248-207ENST00000607045 UBE2L6O14933 153 aa13.94□□□□□ -0.18
TMEM248-207ENST00000607045 CNBPP62633 177 aaKnown RBP13.94□□□□□ -0.18
TMEM248-207ENST00000607045 CT83Q5H943 113 aa13.93□□□□□ -0.18
TMEM248-207ENST00000607045 COTL1Q14019 142 aa13.92□□□□□ -0.18
TMEM248-207ENST00000607045 DPH3Q96FX2 82 aa13.92□□□□□ -0.18
TMEM248-207ENST00000607045 PGLYRP4Q96LB8 373 aa13.92□□□□□ -0.18
TMEM248-207ENST00000607045 CIRBPQ14011 172 aaKnown RBP13.91□□□□□ -0.18
TMEM248-207ENST00000607045 PLA2G2DQ9UNK4 145 aa13.91□□□□□ -0.18
TMEM248-207ENST00000607045 CHTF8P0CG12 524 aa13.9□□□□□ -0.18
TMEM248-207ENST00000607045 A0A1B0GVG6 124 aa13.89□□□□□ -0.19
TMEM248-207ENST00000607045 FAM74A3Q4VXF1 159 aa13.89□□□□□ -0.19
TMEM248-207ENST00000607045 GTSF1Q8WW33 167 aa13.89□□□□□ -0.19
TMEM248-207ENST00000607045 IGHV3-64A0A075B6Q5 118 aa13.88□□□□□ -0.19
TMEM248-207ENST00000607045 AMTP48728 403 aa13.88□□□□□ -0.19
TMEM248-207ENST00000607045 LINC01551Q86U37 167 aa13.88□□□□□ -0.19
TMEM248-207ENST00000607045 AP5S1Q9NUS5 200 aa13.88□□□□□ -0.19
TMEM248-207ENST00000607045 A0A087WYN8 130 aa13.87□□□□□ -0.19
TMEM248-207ENST00000607045 TRAV26-2A0A0B4J265 109 aa13.87□□□□□ -0.19
TMEM248-207ENST00000607045 FAM231BA6NCW3 169 aa13.87□□□□□ -0.19
TMEM248-207ENST00000607045 MT1HL1P0DM35 61 aa13.87□□□□□ -0.19
TMEM248-207ENST00000607045 GATD1Q8NB37 220 aa13.87□□□□□ -0.19
TMEM248-207ENST00000607045 TSKUQ8WUA8 353 aa13.87□□□□□ -0.19
TMEM248-207ENST00000607045 OSTCQ9NRP0 149 aa13.87□□□□□ -0.19
TMEM248-207ENST00000607045 IGKV3OR2-268A0A0C4DH90 116 aa13.86□□□□□ -0.19
TMEM248-207ENST00000607045 GAGE12HA6NDE8 117 aa13.86□□□□□ -0.19
TMEM248-207ENST00000607045 SRP19P09132 144 aaKnown RBP13.86□□□□□ -0.19
TMEM248-207ENST00000607045 FOXA3P55318 350 aaPredicted RBP13.86□□□□□ -0.19
TMEM248-207ENST00000607045 PEA15Q15121 130 aa13.86□□□□□ -0.19
TMEM248-207ENST00000607045 TMEM241Q24JQ0 296 aa13.86□□□□□ -0.19
TMEM248-207ENST00000607045 A0A1B0GUT8 65 aa13.85□□□□□ -0.19
TMEM248-207ENST00000607045 NCR2O95944 276 aa13.85□□□□□ -0.19
TMEM248-207ENST00000607045 C15orf56Q8N910 161 aa13.85□□□□□ -0.19
TMEM248-207ENST00000607045 TNXBP22105 4242 aa13.85□□□□□ -0.19
TMEM248-207ENST00000607045 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.84□□□□□ -0.19
TMEM248-207ENST00000607045 HIGD1CA8MV81 97 aa13.84□□□□□ -0.19
TMEM248-207ENST00000607045 AMMECR1LQ6DCA0 310 aa13.84□□□□□ -0.19
TMEM248-207ENST00000607045 SMDT1Q9H4I9 107 aa13.84□□□□□ -0.19
TMEM248-207ENST00000607045 SPACA4Q8TDM5 124 aa13.83□□□□□ -0.2
TMEM248-207ENST00000607045 RPL39LQ96EH5 51 aaKnown RBP13.83□□□□□ -0.2
TMEM248-207ENST00000607045 COX6A2Q02221 97 aa13.82□□□□□ -0.2
TMEM248-207ENST00000607045 RIGQ13278 110 aa13.82□□□□□ -0.2
TMEM248-207ENST00000607045 Q6ZRU5 148 aa13.82□□□□□ -0.2
TMEM248-207ENST00000607045 APCSP02743 223 aa13.81□□□□□ -0.2
TMEM248-207ENST00000607045 HIGD2BQ4VC39 106 aa13.81□□□□□ -0.2
TMEM248-207ENST00000607045 RNF185Q96GF1 192 aa13.81□□□□□ -0.2
TMEM248-207ENST00000607045 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.8□□□□□ -0.2
TMEM248-207ENST00000607045 IGKV2-29A2NJV5 120 aaPredicted RBP13.8□□□□□ -0.2
TMEM248-207ENST00000607045 H7C423 109 aa13.8□□□□□ -0.2
TMEM248-207ENST00000607045 PMCHP20382 165 aa13.8□□□□□ -0.2
TMEM248-207ENST00000607045 ADIRFQ15847 76 aa13.8□□□□□ -0.2
TMEM248-207ENST00000607045 CFAP161Q6P656 301 aa13.8□□□□□ -0.2
TMEM248-207ENST00000607045 TMEM191AQ9H0A3 160 aa13.8□□□□□ -0.2
TMEM248-207ENST00000607045 NAT8Q9UHE5 227 aa13.8□□□□□ -0.2
TMEM248-207ENST00000607045 SDHAF1A6NFY7 115 aa13.79□□□□□ -0.2
TMEM248-207ENST00000607045 I3L3M4 83 aa13.79□□□□□ -0.2
TMEM248-207ENST00000607045 RPS10P46783 165 aaKnown RBP13.79□□□□□ -0.2
TMEM248-207ENST00000607045 PRSS3P2Q8NHM4 247 aa13.79□□□□□ -0.2
TMEM248-207ENST00000607045 CHCHD10Q8WYQ3 142 aaPredicted RBP13.79□□□□□ -0.2
TMEM248-207ENST00000607045 ST20Q9HBF5 79 aa13.79□□□□□ -0.2
TMEM248-207ENST00000607045 PLAC8Q9NZF1 115 aa13.79□□□□□ -0.2
TMEM248-207ENST00000607045 NAT8BQ9UHF3 227 aa13.79□□□□□ -0.2
TMEM248-207ENST00000607045 PHOX2AO14813 284 aa13.78□□□□□ -0.2
TMEM248-207ENST00000607045 PPP1R17O96001 155 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms